RNA–Protein interactions for RNA: ENST00000607443.1

RNU4-89P-201, Transcript of RNA, U4 small nuclear 89, pseudogene, humanhuman

BASIC

Gene RNU4-89P, Length 133 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-89P-201ENST00000607443 ARSIQ5FYB1 569 aa11.96□□□□□ -0.49
RNU4-89P-201ENST00000607443 PHF8Q9UPP1 1060 aa11.95□□□□□ -0.5
RNU4-89P-201ENST00000607443 RIOK3O14730 519 aaKnown RBP11.93□□□□□ -0.5
RNU4-89P-201ENST00000607443 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.92□□□□□ -0.5
RNU4-89P-201ENST00000607443 ANKRD13DQ6ZTN6 518 aa11.92□□□□□ -0.5
RNU4-89P-201ENST00000607443 ZFP91Q96JP5 570 aaPredicted RBP11.92□□□□□ -0.5
RNU4-89P-201ENST00000607443 RNF25Q96BH1 459 aaPredicted RBP11.91□□□□□ -0.5
RNU4-89P-201ENST00000607443 ZNF316A6NFI3 1004 aaPredicted RBP11.9□□□□□ -0.5
RNU4-89P-201ENST00000607443 VGFO15240 615 aaPredicted RBP11.89□□□□□ -0.51
RNU4-89P-201ENST00000607443 KHSRPQ92945 711 aaKnown RBP eCLIP11.89□□□□□ -0.51
RNU4-89P-201ENST00000607443 LSM11P83369 360 aaKnown RBP eCLIP11.85□□□□□ -0.51
RNU4-89P-201ENST00000607443 NLRP6P59044 892 aa11.83□□□□□ -0.52
RNU4-89P-201ENST00000607443 FBXO22Q8NEZ5 403 aa11.8□□□□□ -0.52
RNU4-89P-201ENST00000607443 PBX2P40425 430 aa11.77□□□□□ -0.53
RNU4-89P-201ENST00000607443 KIF3CO14782 793 aa11.76□□□□□ -0.53
RNU4-89P-201ENST00000607443 NUDT7P0C024 238 aa11.75□□□□□ -0.53
RNU4-89P-201ENST00000607443 C2orf72A6NCS6 295 aa11.74□□□□□ -0.53
RNU4-89P-201ENST00000607443 BCL11BQ9C0K0 894 aaPredicted RBP11.74□□□□□ -0.53
RNU4-89P-201ENST00000607443 POTEEQ6S8J3 1075 aa11.73□□□□□ -0.53
RNU4-89P-201ENST00000607443 LHX6Q9UPM6 363 aa11.72□□□□□ -0.53
RNU4-89P-201ENST00000607443 AXIN2Q9Y2T1 843 aa11.72□□□□□ -0.53
RNU4-89P-201ENST00000607443 MFRPQ9BY79 579 aa11.71□□□□□ -0.53
RNU4-89P-201ENST00000607443 SLC34A2O95436 690 aa11.7□□□□□ -0.54
RNU4-89P-201ENST00000607443 TAOK2Q9UL54 1235 aa11.7□□□□□ -0.54
RNU4-89P-201ENST00000607443 PLA2G2EQ9NZK7 142 aa11.69□□□□□ -0.54
RNU4-89P-201ENST00000607443 PCDHGA4Q9Y5G9 962 aa11.69□□□□□ -0.54
RNU4-89P-201ENST00000607443 STK24Q9Y6E0 443 aa11.69□□□□□ -0.54
RNU4-89P-201ENST00000607443 HCSTQ9UBK5 93 aa11.68□□□□□ -0.54
RNU4-89P-201ENST00000607443 ADGRD1Q6QNK2 874 aa11.62□□□□□ -0.55
RNU4-89P-201ENST00000607443 ARHGAP33O14559 1287 aa11.61□□□□□ -0.55
RNU4-89P-201ENST00000607443 STK25O00506 426 aa11.6□□□□□ -0.55
RNU4-89P-201ENST00000607443 TMC2Q8TDI7 906 aa11.6□□□□□ -0.55
RNU4-89P-201ENST00000607443 PSDA5PKW4 1024 aaPredicted RBP11.57□□□□□ -0.56
RNU4-89P-201ENST00000607443 KDM4FA0A1W2PPD8 638 aa11.54□□□□□ -0.56
RNU4-89P-201ENST00000607443 TK2O00142 265 aa11.54□□□□□ -0.56
RNU4-89P-201ENST00000607443 HRO43593 1189 aa11.53□□□□□ -0.56
RNU4-89P-201ENST00000607443 DMRTA1Q5VZB9 504 aa11.51□□□□□ -0.57
RNU4-89P-201ENST00000607443 PSEN2P49810 448 aa11.5□□□□□ -0.57
RNU4-89P-201ENST00000607443 PTCD2Q8WV60 388 aaKnown RBP11.5□□□□□ -0.57
RNU4-89P-201ENST00000607443 PPP1R37O75864 691 aa11.49□□□□□ -0.57
RNU4-89P-201ENST00000607443 ECM2O94769 699 aaPredicted RBP11.47□□□□□ -0.57
RNU4-89P-201ENST00000607443 KCTD12Q96CX2 325 aaKnown RBP11.45□□□□□ -0.58
RNU4-89P-201ENST00000607443 PPP4R3BQ5MIZ7 849 aa11.43□□□□□ -0.58
RNU4-89P-201ENST00000607443 FOXK1P85037 733 aa11.42□□□□□ -0.58
RNU4-89P-201ENST00000607443 STAC3Q96MF2 364 aa11.42□□□□□ -0.58
RNU4-89P-201ENST00000607443 RGL2O15211 777 aa11.41□□□□□ -0.58
RNU4-89P-201ENST00000607443 PLPP6Q8IY26 295 aa11.41□□□□□ -0.58
RNU4-89P-201ENST00000607443 TBC1D12O60347 775 aa11.38□□□□□ -0.59
RNU4-89P-201ENST00000607443 GPHNQ9NQX3 736 aaPredicted RBP11.37□□□□□ -0.59
RNU4-89P-201ENST00000607443 KCNK17Q96T54 332 aa11.36□□□□□ -0.59
RNU4-89P-201ENST00000607443 PKD2Q13563 968 aa11.35□□□□□ -0.59
RNU4-89P-201ENST00000607443 DSG2Q14126 1118 aa11.34□□□□□ -0.59
RNU4-89P-201ENST00000607443 KCNH8Q96L42 1107 aa11.34□□□□□ -0.59
RNU4-89P-201ENST00000607443 VPS9D1Q9Y2B5 631 aa11.34□□□□□ -0.59
RNU4-89P-201ENST00000607443 PTPN5P54829 565 aa11.33□□□□□ -0.6
RNU4-89P-201ENST00000607443 RGS20O76081 388 aa11.32□□□□□ -0.6
RNU4-89P-201ENST00000607443 IFFO2Q5TF58 517 aa11.31□□□□□ -0.6
RNU4-89P-201ENST00000607443 SLC4A5Q9BY07 1137 aa11.28□□□□□ -0.6
RNU4-89P-201ENST00000607443 BHMG1C9JSJ3 638 aaPredicted RBP11.25□□□□□ -0.61
RNU4-89P-201ENST00000607443 ZNF454Q8N9F8 522 aa11.25□□□□□ -0.61
RNU4-89P-201ENST00000607443 OXER1Q8TDS5 423 aa11.25□□□□□ -0.61
RNU4-89P-201ENST00000607443 BCL2L12Q9HB09 334 aa11.25□□□□□ -0.61
RNU4-89P-201ENST00000607443 THSD4Q6ZMP0 1018 aa11.24□□□□□ -0.61
RNU4-89P-201ENST00000607443 IRX2Q9BZI1 471 aaPredicted RBP11.23□□□□□ -0.61
RNU4-89P-201ENST00000607443 A0A0G2JS52 829 aa11.21□□□□□ -0.61
RNU4-89P-201ENST00000607443 UPF1Q92900 1129 aaKnown RBP eCLIP11.2□□□□□ -0.62
RNU4-89P-201ENST00000607443 GOLGA8CPA6NN73 597 aa11.19□□□□□ -0.62
RNU4-89P-201ENST00000607443 FOSBP53539 338 aa11.19□□□□□ -0.62
RNU4-89P-201ENST00000607443 WNT2BQ93097 391 aa11.19□□□□□ -0.62
RNU4-89P-201ENST00000607443 ZBED2Q9BTP6 218 aa11.19□□□□□ -0.62
RNU4-89P-201ENST00000607443 PTPREP23469 700 aa11.18□□□□□ -0.62
RNU4-89P-201ENST00000607443 HS6ST3Q8IZP7 471 aa11.17□□□□□ -0.62
RNU4-89P-201ENST00000607443 MRPL50Q8N5N7 158 aaKnown RBP11.17□□□□□ -0.62
RNU4-89P-201ENST00000607443 ANO8Q9HCE9 1232 aaPredicted RBP11.15□□□□□ -0.62
RNU4-89P-201ENST00000607443 CRISPLD2Q9H0B8 497 aa11.13□□□□□ -0.63
RNU4-89P-201ENST00000607443 PPP1R15BQ5SWA1 713 aa11.11□□□□□ -0.63
RNU4-89P-201ENST00000607443 JPH4Q96JJ6 628 aa11.1□□□□□ -0.63
RNU4-89P-201ENST00000607443 NBPF3Q9H094 633 aa11.1□□□□□ -0.63
RNU4-89P-201ENST00000607443 ZDHHC16Q969W1 377 aa11.09□□□□□ -0.63
RNU4-89P-201ENST00000607443 ADAM33Q9BZ11 813 aa11.09□□□□□ -0.63
RNU4-89P-201ENST00000607443 EVI5O60447 810 aa11.07□□□□□ -0.64
RNU4-89P-201ENST00000607443 CHGAP10645 457 aaKnown RBP11.05□□□□□ -0.64
RNU4-89P-201ENST00000607443 ITGBL1O95965 494 aaPredicted RBP11.04□□□□□ -0.64
RNU4-89P-201ENST00000607443 PDE4AP27815 886 aa11.04□□□□□ -0.64
RNU4-89P-201ENST00000607443 NKX1-1Q15270 411 aaPredicted RBP11.04□□□□□ -0.64
RNU4-89P-201ENST00000607443 DNAJC5Q9H3Z4 198 aa11.03□□□□□ -0.64
RNU4-89P-201ENST00000607443 NCKAP5LQ9HCH0 1330 aa11.03□□□□□ -0.64
RNU4-89P-201ENST00000607443 RYDENQ9NUL5 291 aaKnown RBP11.01□□□□□ -0.65
RNU4-89P-201ENST00000607443 RABGEF1Q9UJ41 708 aa11.01□□□□□ -0.65
RNU4-89P-201ENST00000607443 ANKK1Q8NFD2 765 aa11□□□□□ -0.65
RNU4-89P-201ENST00000607443 PPP1R3GB7ZBB8 358 aa10.99□□□□□ -0.65
RNU4-89P-201ENST00000607443 PROX2Q3B8N5 592 aa10.98□□□□□ -0.65
RNU4-89P-201ENST00000607443 Q6ZNB5 142 aa10.98□□□□□ -0.65
RNU4-89P-201ENST00000607443 MAP3K9P80192 1104 aa10.97□□□□□ -0.65
RNU4-89P-201ENST00000607443 BCAMP50895 628 aa10.96□□□□□ -0.65
RNU4-89P-201ENST00000607443 PCDHGA10Q9Y5H3 936 aa10.96□□□□□ -0.65
RNU4-89P-201ENST00000607443 SOWAHBA6NEL2 793 aa10.95□□□□□ -0.66
RNU4-89P-201ENST00000607443 COL9A1P20849 921 aa10.95□□□□□ -0.66
RNU4-89P-201ENST00000607443 LAPTM4BQ86VI4 370 aa10.94□□□□□ -0.66
RNU4-89P-201ENST00000607443 LARP6Q9BRS8 491 aaKnown RBP10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms