RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 L3MBTL3Q96JM7 780 aaPredicted RBP10.74□□□□□ -0.69
LINC00397-202ENST00000606785 ZNF467Q7Z7K2 595 aaPredicted RBP10.7□□□□□ -0.7
LINC00397-202ENST00000606785 MKRN3Q13064 507 aaKnown RBP10.69□□□□□ -0.7
LINC00397-202ENST00000606785 KRTAP3-3Q9BYR6 98 aa10.69□□□□□ -0.7
LINC00397-202ENST00000606785 KRTAP3-2Q9BYR7 98 aa10.69□□□□□ -0.7
LINC00397-202ENST00000606785 GOLGA2Q08379 1002 aa10.68□□□□□ -0.7
LINC00397-202ENST00000606785 HS3ST6Q96QI5 342 aa10.68□□□□□ -0.7
LINC00397-202ENST00000606785 POTEB3A0JP26 581 aa10.64□□□□□ -0.71
LINC00397-202ENST00000606785 FAM205CA6NFA0 338 aa10.64□□□□□ -0.71
LINC00397-202ENST00000606785 POTEBQ6S5H4 581 aa10.64□□□□□ -0.71
LINC00397-202ENST00000606785 P3H3Q8IVL6 736 aa10.64□□□□□ -0.71
LINC00397-202ENST00000606785 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.63□□□□□ -0.71
LINC00397-202ENST00000606785 ILDR1Q86SU0 546 aaPredicted RBP10.6□□□□□ -0.71
LINC00397-202ENST00000606785 PSEN1P49768 467 aa10.58□□□□□ -0.72
LINC00397-202ENST00000606785 PDAP1Q13442 181 aaKnown RBP10.57□□□□□ -0.72
LINC00397-202ENST00000606785 WDR70Q9NW82 654 aa10.55□□□□□ -0.72
LINC00397-202ENST00000606785 CADPS2Q86UW7 1296 aa10.54□□□□□ -0.72
LINC00397-202ENST00000606785 HOXB3P14651 431 aaPredicted RBP10.52□□□□□ -0.73
LINC00397-202ENST00000606785 KCNV2Q8TDN2 545 aa10.52□□□□□ -0.73
LINC00397-202ENST00000606785 G3V3G9 751 aa10.5□□□□□ -0.73
LINC00397-202ENST00000606785 HOXB1P14653 301 aaPredicted RBP10.5□□□□□ -0.73
LINC00397-202ENST00000606785 BOLA1Q9Y3E2 137 aa10.5□□□□□ -0.73
LINC00397-202ENST00000606785 DPY19L2Q6NUT2 758 aa10.48□□□□□ -0.73
LINC00397-202ENST00000606785 MFRPQ9BY79 579 aa10.48□□□□□ -0.73
LINC00397-202ENST00000606785 ZNF710Q8N1W2 664 aa10.47□□□□□ -0.73
LINC00397-202ENST00000606785 DOK7Q18PE1 504 aa10.46□□□□□ -0.73
LINC00397-202ENST00000606785 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.45□□□□□ -0.74
LINC00397-202ENST00000606785 GTF3C3Q9Y5Q9 886 aa10.45□□□□□ -0.74
LINC00397-202ENST00000606785 ERBB3P21860 1342 aa10.44□□□□□ -0.74
LINC00397-202ENST00000606785 LMOD2Q6P5Q4 547 aa10.44□□□□□ -0.74
LINC00397-202ENST00000606785 RNF166Q96A37 237 aaPredicted RBP10.44□□□□□ -0.74
LINC00397-202ENST00000606785 TMEM132AQ24JP5 1023 aa10.43□□□□□ -0.74
LINC00397-202ENST00000606785 CABP2Q9NPB3 220 aa10.43□□□□□ -0.74
LINC00397-202ENST00000606785 TULP1O00294 542 aaPredicted RBP10.42□□□□□ -0.74
LINC00397-202ENST00000606785 TIMELESSQ9UNS1 1208 aa10.42□□□□□ -0.74
LINC00397-202ENST00000606785 RIMBP2O15034 1052 aa10.4□□□□□ -0.74
LINC00397-202ENST00000606785 ARHGEF1Q92888 912 aaKnown RBP10.39□□□□□ -0.75
LINC00397-202ENST00000606785 PPP1R37O75864 691 aa10.38□□□□□ -0.75
LINC00397-202ENST00000606785 NLRP6P59044 892 aa10.38□□□□□ -0.75
LINC00397-202ENST00000606785 FBXO22Q8NEZ5 403 aa10.38□□□□□ -0.75
LINC00397-202ENST00000606785 MYT1LQ9UL68 1186 aa10.37□□□□□ -0.75
LINC00397-202ENST00000606785 SOX12O15370 315 aa10.36□□□□□ -0.75
LINC00397-202ENST00000606785 VARS2Q5ST30 1063 aaKnown RBP10.36□□□□□ -0.75
LINC00397-202ENST00000606785 ERICH6Q7L0X2 663 aa10.36□□□□□ -0.75
LINC00397-202ENST00000606785 EFCAB3Q8N7B9 438 aa10.36□□□□□ -0.75
LINC00397-202ENST00000606785 ZSWIM6Q9HCJ5 1215 aa10.36□□□□□ -0.75
LINC00397-202ENST00000606785 E2F4Q16254 413 aa10.35□□□□□ -0.75
LINC00397-202ENST00000606785 PTGER2P43116 358 aa10.33□□□□□ -0.76
LINC00397-202ENST00000606785 ZNF687Q8N1G0 1237 aa10.33□□□□□ -0.76
LINC00397-202ENST00000606785 PHF8Q9UPP1 1060 aa10.33□□□□□ -0.76
LINC00397-202ENST00000606785 TESPA1A2RU30 521 aaPredicted RBP10.28□□□□□ -0.76
LINC00397-202ENST00000606785 ZC3H15Q8WU90 426 aaKnown RBP10.28□□□□□ -0.76
LINC00397-202ENST00000606785 SEMA3EO15041 775 aa10.27□□□□□ -0.77
LINC00397-202ENST00000606785 GPR153Q6NV75 609 aa10.26□□□□□ -0.77
LINC00397-202ENST00000606785 NCKAP5LQ9HCH0 1330 aa10.26□□□□□ -0.77
LINC00397-202ENST00000606785 BRPF1P55201 1214 aaPredicted RBP10.25□□□□□ -0.77
LINC00397-202ENST00000606785 MICALL2Q8IY33 904 aa10.25□□□□□ -0.77
LINC00397-202ENST00000606785 PDE4AP27815 886 aa10.24□□□□□ -0.77
LINC00397-202ENST00000606785 TMEM92Q6UXU6 159 aa10.24□□□□□ -0.77
LINC00397-202ENST00000606785 LARP6Q9BRS8 491 aaKnown RBP10.23□□□□□ -0.77
LINC00397-202ENST00000606785 MFSD10Q14728 455 aa10.22□□□□□ -0.77
LINC00397-202ENST00000606785 MS4A4AQ96JQ5 239 aa10.21□□□□□ -0.77
LINC00397-202ENST00000606785 SMYD5Q6GMV2 418 aa10.2□□□□□ -0.78
LINC00397-202ENST00000606785 CRISPLD2Q9H0B8 497 aa10.2□□□□□ -0.78
LINC00397-202ENST00000606785 ARIH1Q9Y4X5 557 aaPredicted RBP10.2□□□□□ -0.78
LINC00397-202ENST00000606785 DDX27Q96GQ7 796 aaKnown RBP10.18□□□□□ -0.78
LINC00397-202ENST00000606785 SLC24A3Q9HC58 644 aa10.18□□□□□ -0.78
LINC00397-202ENST00000606785 NEUROD2Q15784 382 aa10.16□□□□□ -0.78
LINC00397-202ENST00000606785 C14orf37Q86TY3 774 aa10.16□□□□□ -0.78
LINC00397-202ENST00000606785 ZMYND10O75800 440 aa10.15□□□□□ -0.78
LINC00397-202ENST00000606785 CAMK2BQ13554 666 aa10.15□□□□□ -0.78
LINC00397-202ENST00000606785 ANKRD13DQ6ZTN6 518 aa10.15□□□□□ -0.78
LINC00397-202ENST00000606785 ZNF316A6NFI3 1004 aaPredicted RBP10.14□□□□□ -0.79
LINC00397-202ENST00000606785 LSM11P83369 360 aaKnown RBP eCLIP10.14□□□□□ -0.79
LINC00397-202ENST00000606785 ARSIQ5FYB1 569 aa10.14□□□□□ -0.79
LINC00397-202ENST00000606785 ARXQ96QS3 562 aa10.1□□□□□ -0.79
LINC00397-202ENST00000606785 PBX2P40425 430 aa10.09□□□□□ -0.79
LINC00397-202ENST00000606785 BARGINQ6ZT62 677 aa10.09□□□□□ -0.79
LINC00397-202ENST00000606785 KHSRPQ92945 711 aaKnown RBP eCLIP10.05□□□□□ -0.8
LINC00397-202ENST00000606785 PPP1R15BQ5SWA1 713 aa10.04□□□□□ -0.8
LINC00397-202ENST00000606785 GPHNQ9NQX3 736 aaPredicted RBP10.04□□□□□ -0.8
LINC00397-202ENST00000606785 MLLT3P42568 568 aaPredicted RBP10.03□□□□□ -0.8
LINC00397-202ENST00000606785 RBM26Q5T8P6 1007 aaKnown RBP10.03□□□□□ -0.8
LINC00397-202ENST00000606785 PLA2G2EQ9NZK7 142 aa10.03□□□□□ -0.8
LINC00397-202ENST00000606785 GPIHBP1Q8IV16 184 aa10.02□□□□□ -0.81
LINC00397-202ENST00000606785 AK7Q96M32 723 aa10.01□□□□□ -0.81
LINC00397-202ENST00000606785 HCSTQ9UBK5 93 aa10.01□□□□□ -0.81
LINC00397-202ENST00000606785 DAXXQ9UER7 740 aaPredicted RBP9.98□□□□□ -0.81
LINC00397-202ENST00000606785 SPDYE16A6NNV3 312 aaPredicted RBP9.97□□□□□ -0.81
LINC00397-202ENST00000606785 KIF3CO14782 793 aa9.97□□□□□ -0.81
LINC00397-202ENST00000606785 NUDT7P0C024 238 aa9.97□□□□□ -0.81
LINC00397-202ENST00000606785 KRI1Q8N9T8 703 aaKnown RBP9.97□□□□□ -0.81
LINC00397-202ENST00000606785 DPYSL4O14531 572 aa9.96□□□□□ -0.82
LINC00397-202ENST00000606785 PDIA6Q15084 440 aa9.96□□□□□ -0.82
LINC00397-202ENST00000606785 POTEEQ6S8J3 1075 aa9.96□□□□□ -0.82
LINC00397-202ENST00000606785 EMILIN3Q9NT22 766 aa9.96□□□□□ -0.82
LINC00397-202ENST00000606785 DSG2Q14126 1118 aa9.95□□□□□ -0.82
LINC00397-202ENST00000606785 LHX6Q9UPM6 363 aa9.95□□□□□ -0.82
LINC00397-202ENST00000606785 SLC34A2O95436 690 aa9.94□□□□□ -0.82
LINC00397-202ENST00000606785 GPBP1L1Q9HC44 474 aaPredicted RBP9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms