RNA–Protein interactions for RNA: ENST00000606706.5

LINC00458-205, long intergenic non-protein coding RNA 458, humanhuman

TSL 2

Gene LINC00458, Length 833 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-205ENST00000606706 ZSWIM6Q9HCJ5 1215 aa14.34□□□□□ -0.11
LINC00458-205ENST00000606706 GPR153Q6NV75 609 aa14.32□□□□□ -0.12
LINC00458-205ENST00000606706 FBXO22Q8NEZ5 403 aa14.28□□□□□ -0.12
LINC00458-205ENST00000606706 BCL11BQ9C0K0 894 aaPredicted RBP14.28□□□□□ -0.12
LINC00458-205ENST00000606706 NLRP6P59044 892 aa14.27□□□□□ -0.13
LINC00458-205ENST00000606706 ZNF687Q8N1G0 1237 aa14.26□□□□□ -0.13
LINC00458-205ENST00000606706 ARSIQ5FYB1 569 aa14.25□□□□□ -0.13
LINC00458-205ENST00000606706 STK24Q9Y6E0 443 aa14.24□□□□□ -0.13
LINC00458-205ENST00000606706 RNF166Q96A37 237 aaPredicted RBP14.22□□□□□ -0.13
LINC00458-205ENST00000606706 KHSRPQ92945 711 aaKnown RBP eCLIP14.21□□□□□ -0.13
LINC00458-205ENST00000606706 MFRPQ9BY79 579 aa14.21□□□□□ -0.13
LINC00458-205ENST00000606706 TAOK2Q9UL54 1235 aa14.2□□□□□ -0.14
LINC00458-205ENST00000606706 MYT1LQ9UL68 1186 aa14.18□□□□□ -0.14
LINC00458-205ENST00000606706 STK25O00506 426 aa14.15□□□□□ -0.14
LINC00458-205ENST00000606706 ZNF316A6NFI3 1004 aaPredicted RBP14.14□□□□□ -0.15
LINC00458-205ENST00000606706 C2orf72A6NCS6 295 aa14.12□□□□□ -0.15
LINC00458-205ENST00000606706 KIF3CO14782 793 aa14.12□□□□□ -0.15
LINC00458-205ENST00000606706 ECM2O94769 699 aaPredicted RBP14.12□□□□□ -0.15
LINC00458-205ENST00000606706 ANKRD13DQ6ZTN6 518 aa14.09□□□□□ -0.15
LINC00458-205ENST00000606706 NUDT7P0C024 238 aa14.05□□□□□ -0.16
LINC00458-205ENST00000606706 RGL2O15211 777 aa14.04□□□□□ -0.16
LINC00458-205ENST00000606706 PTGER2P43116 358 aa14.04□□□□□ -0.16
LINC00458-205ENST00000606706 LSM11P83369 360 aaKnown RBP eCLIP14.02□□□□□ -0.17
LINC00458-205ENST00000606706 PKD2Q13563 968 aa14.02□□□□□ -0.17
LINC00458-205ENST00000606706 PCDHGA4Q9Y5G9 962 aa14□□□□□ -0.17
LINC00458-205ENST00000606706 LHX6Q9UPM6 363 aa13.99□□□□□ -0.17
LINC00458-205ENST00000606706 SLC34A2O95436 690 aa13.97□□□□□ -0.17
LINC00458-205ENST00000606706 POTEEQ6S8J3 1075 aa13.97□□□□□ -0.17
LINC00458-205ENST00000606706 TMC2Q8TDI7 906 aa13.97□□□□□ -0.17
LINC00458-205ENST00000606706 PPP1R37O75864 691 aa13.96□□□□□ -0.17
LINC00458-205ENST00000606706 AXIN2Q9Y2T1 843 aa13.94□□□□□ -0.18
LINC00458-205ENST00000606706 PBX2P40425 430 aa13.93□□□□□ -0.18
LINC00458-205ENST00000606706 KDM4FA0A1W2PPD8 638 aa13.81□□□□□ -0.2
LINC00458-205ENST00000606706 ARHGAP33O14559 1287 aa13.79□□□□□ -0.2
LINC00458-205ENST00000606706 PTCD2Q8WV60 388 aaKnown RBP13.79□□□□□ -0.2
LINC00458-205ENST00000606706 ADGRD1Q6QNK2 874 aa13.78□□□□□ -0.2
LINC00458-205ENST00000606706 PSDA5PKW4 1024 aaPredicted RBP13.77□□□□□ -0.21
LINC00458-205ENST00000606706 PLPP6Q8IY26 295 aa13.77□□□□□ -0.21
LINC00458-205ENST00000606706 FOXK1P85037 733 aa13.76□□□□□ -0.21
LINC00458-205ENST00000606706 DMRTA1Q5VZB9 504 aa13.73□□□□□ -0.21
LINC00458-205ENST00000606706 GPHNQ9NQX3 736 aaPredicted RBP13.73□□□□□ -0.21
LINC00458-205ENST00000606706 PSEN2P49810 448 aa13.72□□□□□ -0.21
LINC00458-205ENST00000606706 HS6ST3Q8IZP7 471 aa13.72□□□□□ -0.21
LINC00458-205ENST00000606706 DSG2Q14126 1118 aa13.71□□□□□ -0.21
LINC00458-205ENST00000606706 HCSTQ9UBK5 93 aa13.71□□□□□ -0.21
LINC00458-205ENST00000606706 PLA2G2EQ9NZK7 142 aa13.7□□□□□ -0.22
LINC00458-205ENST00000606706 TK2O00142 265 aa13.68□□□□□ -0.22
LINC00458-205ENST00000606706 HRO43593 1189 aa13.68□□□□□ -0.22
LINC00458-205ENST00000606706 PPP4R3BQ5MIZ7 849 aa13.66□□□□□ -0.22
LINC00458-205ENST00000606706 TBC1D12O60347 775 aa13.64□□□□□ -0.23
LINC00458-205ENST00000606706 CHGAP10645 457 aaKnown RBP13.62□□□□□ -0.23
LINC00458-205ENST00000606706 KCNK17Q96T54 332 aa13.59□□□□□ -0.23
LINC00458-205ENST00000606706 NKX1-1Q15270 411 aaPredicted RBP13.58□□□□□ -0.24
LINC00458-205ENST00000606706 OXER1Q8TDS5 423 aa13.58□□□□□ -0.24
LINC00458-205ENST00000606706 KCTD12Q96CX2 325 aaKnown RBP13.58□□□□□ -0.24
LINC00458-205ENST00000606706 UPF1Q92900 1129 aaKnown RBP eCLIP13.57□□□□□ -0.24
LINC00458-205ENST00000606706 STAC3Q96MF2 364 aa13.53□□□□□ -0.24
LINC00458-205ENST00000606706 CRISPLD2Q9H0B8 497 aa13.53□□□□□ -0.24
LINC00458-205ENST00000606706 KCNH8Q96L42 1107 aa13.52□□□□□ -0.25
LINC00458-205ENST00000606706 ZNF454Q8N9F8 522 aa13.51□□□□□ -0.25
LINC00458-205ENST00000606706 DNAJC5Q9H3Z4 198 aa13.51□□□□□ -0.25
LINC00458-205ENST00000606706 VPS9D1Q9Y2B5 631 aa13.51□□□□□ -0.25
LINC00458-205ENST00000606706 PPP1R15BQ5SWA1 713 aa13.49□□□□□ -0.25
LINC00458-205ENST00000606706 BCL2L12Q9HB09 334 aa13.46□□□□□ -0.25
LINC00458-205ENST00000606706 NCKAP5LQ9HCH0 1330 aa13.45□□□□□ -0.26
LINC00458-205ENST00000606706 FOSBP53539 338 aa13.44□□□□□ -0.26
LINC00458-205ENST00000606706 PTPN5P54829 565 aa13.44□□□□□ -0.26
LINC00458-205ENST00000606706 RYDENQ9NUL5 291 aaKnown RBP13.44□□□□□ -0.26
LINC00458-205ENST00000606706 SLC4A5Q9BY07 1137 aa13.42□□□□□ -0.26
LINC00458-205ENST00000606706 PTPREP23469 700 aa13.4□□□□□ -0.26
LINC00458-205ENST00000606706 BHMG1C9JSJ3 638 aaPredicted RBP13.39□□□□□ -0.27
LINC00458-205ENST00000606706 PDE4AP27815 886 aa13.39□□□□□ -0.27
LINC00458-205ENST00000606706 ANO8Q9HCE9 1232 aaPredicted RBP13.38□□□□□ -0.27
LINC00458-205ENST00000606706 EVI5O60447 810 aa13.37□□□□□ -0.27
LINC00458-205ENST00000606706 ZBED2Q9BTP6 218 aa13.37□□□□□ -0.27
LINC00458-205ENST00000606706 JPH4Q96JJ6 628 aa13.36□□□□□ -0.27
LINC00458-205ENST00000606706 THSD4Q6ZMP0 1018 aa13.35□□□□□ -0.27
LINC00458-205ENST00000606706 ADAM33Q9BZ11 813 aa13.34□□□□□ -0.27
LINC00458-205ENST00000606706 ZDHHC16Q969W1 377 aa13.33□□□□□ -0.28
LINC00458-205ENST00000606706 LARP6Q9BRS8 491 aaKnown RBP13.33□□□□□ -0.28
LINC00458-205ENST00000606706 GTPBP6O43824 516 aaPredicted RBP13.32□□□□□ -0.28
LINC00458-205ENST00000606706 MRPL50Q8N5N7 158 aaKnown RBP13.32□□□□□ -0.28
LINC00458-205ENST00000606706 GOLGA8CPA6NN73 597 aa13.31□□□□□ -0.28
LINC00458-205ENST00000606706 WNT2BQ93097 391 aa13.31□□□□□ -0.28
LINC00458-205ENST00000606706 DDX27Q96GQ7 796 aaKnown RBP13.3□□□□□ -0.28
LINC00458-205ENST00000606706 MAP3K9P80192 1104 aa13.27□□□□□ -0.29
LINC00458-205ENST00000606706 IFFO2Q5TF58 517 aa13.27□□□□□ -0.29
LINC00458-205ENST00000606706 MFSD10Q14728 455 aa13.26□□□□□ -0.29
LINC00458-205ENST00000606706 EMILIN3Q9NT22 766 aa13.26□□□□□ -0.29
LINC00458-205ENST00000606706 NBPF3Q9H094 633 aa13.25□□□□□ -0.29
LINC00458-205ENST00000606706 PCDHGA10Q9Y5H3 936 aa13.23□□□□□ -0.29
LINC00458-205ENST00000606706 A0A0G2JS52 829 aa13.2□□□□□ -0.3
LINC00458-205ENST00000606706 PPP1R3GB7ZBB8 358 aa13.2□□□□□ -0.3
LINC00458-205ENST00000606706 PROX2Q3B8N5 592 aa13.2□□□□□ -0.3
LINC00458-205ENST00000606706 RGS20O76081 388 aa13.19□□□□□ -0.3
LINC00458-205ENST00000606706 COL9A1P20849 921 aa13.19□□□□□ -0.3
LINC00458-205ENST00000606706 CADPS2Q86UW7 1296 aa13.17□□□□□ -0.3
LINC00458-205ENST00000606706 RABGEF1Q9UJ41 708 aa13.17□□□□□ -0.3
LINC00458-205ENST00000606706 TYW1BQ6NUM6 668 aa13.13□□□□□ -0.31
LINC00458-205ENST00000606706 ANKK1Q8NFD2 765 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms