RNA–Protein interactions for RNA: ENST00000606213.5

PTPRN-219, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-219ENST00000606213 RICTORQ6R327 1708 aa37.3■■■■□ 3.56
PTPRN-219ENST00000606213 ARID4BQ4LE39 1312 aaPredicted RBP37.28■■■■□ 3.56
PTPRN-219ENST00000606213 POGZQ7Z3K3 1410 aa37.26■■■■□ 3.55
PTPRN-219ENST00000606213 PREX2Q70Z35 1606 aa37.22■■■■□ 3.55
PTPRN-219ENST00000606213 ZMYM4Q5VZL5 1548 aa37.21■■■■□ 3.55
PTPRN-219ENST00000606213 CDC42BPBQ9Y5S2 1711 aa37.2■■■■□ 3.55
PTPRN-219ENST00000606213 ARHGEF40Q8TER5 1519 aa37.2■■■■□ 3.55
PTPRN-219ENST00000606213 MAGI2Q86UL8 1455 aa37.2■■■■□ 3.54
PTPRN-219ENST00000606213 MYT1LQ9UL68 1186 aa37.18■■■■□ 3.54
PTPRN-219ENST00000606213 ZNF777Q9ULD5 760 aaPredicted RBP37.18■■■■□ 3.54
PTPRN-219ENST00000606213 ZFYVE16Q7Z3T8 1539 aa37.18■■■■□ 3.54
PTPRN-219ENST00000606213 VPS8Q8N3P4 1428 aa37.18■■■■□ 3.54
PTPRN-219ENST00000606213 CCNB3Q8WWL7 1395 aa37.17■■■■□ 3.54
PTPRN-219ENST00000606213 ZNF518AQ6AHZ1 1483 aa37.16■■■■□ 3.54
PTPRN-219ENST00000606213 AFAP1Q8N556 730 aa37.13■■■■□ 3.53
PTPRN-219ENST00000606213 EHBP1L1Q8N3D4 1523 aa37.13■■■■□ 3.53
PTPRN-219ENST00000606213 CDC42BPAQ5VT25 1732 aa37.13■■■■□ 3.53
PTPRN-219ENST00000606213 YEATS2Q9ULM3 1422 aa37.12■■■■□ 3.53
PTPRN-219ENST00000606213 CFDP1Q9UEE9 299 aaPredicted RBP37.11■■■■□ 3.53
PTPRN-219ENST00000606213 GPATCH8Q9UKJ3 1502 aaKnown RBP37.1■■■■□ 3.53
PTPRN-219ENST00000606213 ABCC1P33527 1531 aa37.05■■■■□ 3.52
PTPRN-219ENST00000606213 TIAM1Q13009 1591 aa37.01■■■■□ 3.52
PTPRN-219ENST00000606213 KDM5CP41229 1560 aa37■■■■□ 3.51
PTPRN-219ENST00000606213 ATP10AO60312 1499 aa37■■■■□ 3.51
PTPRN-219ENST00000606213 TRAPPC8Q9Y2L5 1435 aa36.99■■■■□ 3.51
PTPRN-219ENST00000606213 ARHGEF12Q9NZN5 1544 aa36.99■■■■□ 3.51
PTPRN-219ENST00000606213 BCORL1Q5H9F3 1711 aa36.97■■■■□ 3.51
PTPRN-219ENST00000606213 ITSN2Q9NZM3 1697 aa36.97■■■■□ 3.51
PTPRN-219ENST00000606213 HECW2Q9P2P5 1572 aa36.96■■■■□ 3.51
PTPRN-219ENST00000606213 C9orf84Q5VXU9 1444 aa36.96■■■■□ 3.51
PTPRN-219ENST00000606213 APLP2Q06481 763 aa36.96■■■■□ 3.51
PTPRN-219ENST00000606213 SAMD9LQ8IVG5 1584 aa36.95■■■■□ 3.51
PTPRN-219ENST00000606213 PLEKHH2Q8IVE3 1493 aa36.95■■■■□ 3.51
PTPRN-219ENST00000606213 ADAMTSL3P82987 1691 aa36.94■■■■□ 3.5
PTPRN-219ENST00000606213 HNRNPMP52272 730 aaKnown RBP eCLIP36.94■■■■□ 3.5
PTPRN-219ENST00000606213 MLECQ14165 292 aa36.94■■■■□ 3.5
PTPRN-219ENST00000606213 SUPT6HQ7KZ85 1726 aaKnown RBP36.93■■■■□ 3.5
PTPRN-219ENST00000606213 SYCP2Q9BX26 1530 aa36.92■■■■□ 3.5
PTPRN-219ENST00000606213 MLH3Q9UHC1 1453 aa36.92■■■■□ 3.5
PTPRN-219ENST00000606213 NCOA2Q15596 1464 aa36.91■■■■□ 3.5
PTPRN-219ENST00000606213 KIAA1107Q9UPP5 1409 aa36.89■■■■□ 3.5
PTPRN-219ENST00000606213 LRRC9Q6ZRR7 1453 aa36.88■■■■□ 3.5
PTPRN-219ENST00000606213 PTPRMP28827 1452 aa36.87■■■■□ 3.49
PTPRN-219ENST00000606213 SPAG9O60271 1321 aaKnown RBP36.86■■■■□ 3.49
PTPRN-219ENST00000606213 MADDQ8WXG6 1647 aa36.86■■■■□ 3.49
PTPRN-219ENST00000606213 MAP3K1Q13233 1512 aa36.85■■■■□ 3.49
PTPRN-219ENST00000606213 ZNF644Q9H582 1327 aaPredicted RBP36.83■■■■□ 3.49
PTPRN-219ENST00000606213 DIP2CQ9Y2E4 1556 aa36.83■■■■□ 3.49
PTPRN-219ENST00000606213 SIGLEC1Q9BZZ2 1709 aa36.82■■■■□ 3.48
PTPRN-219ENST00000606213 KANK4Q5T7N3 995 aaPredicted RBP36.8■■■■□ 3.48
PTPRN-219ENST00000606213 ABCA6Q8N139 1617 aa36.79■■■■□ 3.48
PTPRN-219ENST00000606213 RIMS1Q86UR5 1692 aaKnown RBP36.77■■■■□ 3.48
PTPRN-219ENST00000606213 PLPPR3Q6T4P5 718 aa36.76■■■■□ 3.48
PTPRN-219ENST00000606213 KIDINS220Q9ULH0 1771 aa36.74■■■■□ 3.47
PTPRN-219ENST00000606213 REREQ9P2R6 1566 aa36.72■■■■□ 3.47
PTPRN-219ENST00000606213 ATP7AQ04656 1500 aa36.69■■■■□ 3.46
PTPRN-219ENST00000606213 CAMSAP2Q08AD1 1489 aa36.69■■■■□ 3.46
PTPRN-219ENST00000606213 ESF1Q9H501 851 aaKnown RBP36.67■■■■□ 3.46
PTPRN-219ENST00000606213 FER1L4A9Z1Z3 1794 aa36.67■■■■□ 3.46
PTPRN-219ENST00000606213 MBD5Q9P267 1494 aa36.66■■■■□ 3.46
PTPRN-219ENST00000606213 RSPH4AQ5TD94 716 aa36.65■■■■□ 3.46
PTPRN-219ENST00000606213 AGLP35573 1532 aa36.64■■■■□ 3.46
PTPRN-219ENST00000606213 INO80Q9ULG1 1556 aaPredicted RBP36.62■■■■□ 3.45
PTPRN-219ENST00000606213 CCDC141Q6ZP82 1450 aa36.6■■■■□ 3.45
PTPRN-219ENST00000606213 MYOM3Q5VTT5 1437 aa36.59■■■■□ 3.45
PTPRN-219ENST00000606213 A2MP01023 1474 aa36.56■■■■□ 3.44
PTPRN-219ENST00000606213 TSPY4P0CV99 314 aa36.56■■■■□ 3.44
PTPRN-219ENST00000606213 TSPY10P0CW01 314 aa36.56■■■■□ 3.44
PTPRN-219ENST00000606213 RTEL1-TNFRSF6BF6WH68 1400 aa36.56■■■■□ 3.44
PTPRN-219ENST00000606213 MIA2Q96PC5 1412 aa36.54■■■■□ 3.44
PTPRN-219ENST00000606213 CEBPAP49715 358 aaPredicted RBP36.49■■■■□ 3.43
PTPRN-219ENST00000606213 ARHGEF5Q12774 1597 aa36.49■■■■□ 3.43
PTPRN-219ENST00000606213 ADGBQ8N7X0 1667 aa36.48■■■■□ 3.43
PTPRN-219ENST00000606213 PLXNC1O60486 1568 aa36.44■■■■□ 3.42
PTPRN-219ENST00000606213 GGT6Q6P531 493 aa36.44■■■■□ 3.42
PTPRN-219ENST00000606213 CNTLNQ9NXG0 1405 aa36.43■■■■□ 3.42
PTPRN-219ENST00000606213 DHX29Q7Z478 1369 aaKnown RBP36.4■■■■□ 3.42
PTPRN-219ENST00000606213 LMTK3Q96Q04 1460 aa36.38■■■■□ 3.41
PTPRN-219ENST00000606213 KIF3BO15066 747 aa36.34■■■■□ 3.41
PTPRN-219ENST00000606213 FGD6Q6ZV73 1430 aa36.34■■■■□ 3.41
PTPRN-219ENST00000606213 PTPN23Q9H3S7 1636 aa36.33■■■■□ 3.41
PTPRN-219ENST00000606213 PPP6R1Q9UPN7 881 aa36.32■■■■□ 3.4
PTPRN-219ENST00000606213 HSPA2P54652 639 aa36.31■■■■□ 3.4
PTPRN-219ENST00000606213 C3P01024 1663 aa36.29■■■■□ 3.4
PTPRN-219ENST00000606213 MAST1Q9Y2H9 1570 aa36.27■■■■□ 3.4
PTPRN-219ENST00000606213 ZMYM3Q14202 1370 aa36.27■■■■□ 3.4
PTPRN-219ENST00000606213 UHRF1BP1Q6BDS2 1440 aa36.25■■■■□ 3.39
PTPRN-219ENST00000606213 PREX1Q8TCU6 1659 aa36.25■■■■□ 3.39
PTPRN-219ENST00000606213 ILDR1Q86SU0 546 aaPredicted RBP36.24■■■■□ 3.39
PTPRN-219ENST00000606213 MROH2AA6NES4 1674 aa36.23■■■■□ 3.39
PTPRN-219ENST00000606213 CLTCQ00610 1675 aaKnown RBP36.23■■■■□ 3.39
PTPRN-219ENST00000606213 TCOF1Q13428 1488 aaKnown RBP36.21■■■■□ 3.39
PTPRN-219ENST00000606213 FAM50AQ14320 339 aaKnown RBP36.21■■■■□ 3.39
PTPRN-219ENST00000606213 SETD1BQ9UPS6 1966 aaKnown RBP36.2■■■■□ 3.39
PTPRN-219ENST00000606213 ABCC5O15440 1437 aa36.19■■■■□ 3.38
PTPRN-219ENST00000606213 DAPK1P53355 1430 aa36.18■■■■□ 3.38
PTPRN-219ENST00000606213 SHANK2Q9UPX8 1470 aa36.18■■■■□ 3.38
PTPRN-219ENST00000606213 WASHC2CQ9Y4E1 1318 aa36.16■■■■□ 3.38
PTPRN-219ENST00000606213 NPATQ14207 1427 aa36.15■■■■□ 3.38
PTPRN-219ENST00000606213 DNMT1P26358 1616 aaKnown RBP36.14■■■■□ 3.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms