RNA–Protein interactions for RNA: ENST00000606161.1

ZEB1-224, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 3

Gene ZEB1, Length 482 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-224ENST00000606161 HS6ST3Q8IZP7 471 aa8.37□□□□□ -1.07
ZEB1-224ENST00000606161 HS3ST6Q96QI5 342 aa8.37□□□□□ -1.07
ZEB1-224ENST00000606161 FAM205CA6NFA0 338 aa8.36□□□□□ -1.07
ZEB1-224ENST00000606161 DOK7Q18PE1 504 aa8.36□□□□□ -1.07
ZEB1-224ENST00000606161 KIF3CO14782 793 aa8.35□□□□□ -1.07
ZEB1-224ENST00000606161 KRTAP3-3Q9BYR6 98 aa8.34□□□□□ -1.07
ZEB1-224ENST00000606161 KRTAP3-2Q9BYR7 98 aa8.34□□□□□ -1.07
ZEB1-224ENST00000606161 ZNF710Q8N1W2 664 aa8.33□□□□□ -1.08
ZEB1-224ENST00000606161 C2orf72A6NCS6 295 aa8.32□□□□□ -1.08
ZEB1-224ENST00000606161 NKX1-1Q15270 411 aaPredicted RBP8.32□□□□□ -1.08
ZEB1-224ENST00000606161 GPR153Q6NV75 609 aa8.32□□□□□ -1.08
ZEB1-224ENST00000606161 CHGAP10645 457 aaKnown RBP8.3□□□□□ -1.08
ZEB1-224ENST00000606161 SPNS2Q8IVW8 549 aa8.29□□□□□ -1.08
ZEB1-224ENST00000606161 KHSRPQ92945 711 aaKnown RBP eCLIP8.29□□□□□ -1.086e-7■■■■□ 21.8
ZEB1-224ENST00000606161 RIMBP2O15034 1052 aa8.28□□□□□ -1.08
ZEB1-224ENST00000606161 DNAJC5Q9H3Z4 198 aa8.28□□□□□ -1.08
ZEB1-224ENST00000606161 ZSWIM6Q9HCJ5 1215 aa8.28□□□□□ -1.08
ZEB1-224ENST00000606161 ARSIQ5FYB1 569 aa8.27□□□□□ -1.09
ZEB1-224ENST00000606161 ERBB3P21860 1342 aa8.26□□□□□ -1.09
ZEB1-224ENST00000606161 VARS2Q5ST30 1063 aaKnown RBP8.25□□□□□ -1.09
ZEB1-224ENST00000606161 MMRN1Q13201 1228 aa8.24□□□□□ -1.09
ZEB1-224ENST00000606161 TMC2Q8TDI7 906 aa8.22□□□□□ -1.09
ZEB1-224ENST00000606161 SLC34A2O95436 690 aa8.2□□□□□ -1.1
ZEB1-224ENST00000606161 PCDHGA4Q9Y5G9 962 aa8.19□□□□□ -1.1
ZEB1-224ENST00000606161 ZNF316A6NFI3 1004 aaPredicted RBP8.18□□□□□ -1.1
ZEB1-224ENST00000606161 NUDT7P0C024 238 aa8.18□□□□□ -1.1
ZEB1-224ENST00000606161 ZNF687Q8N1G0 1237 aa8.18□□□□□ -1.1
ZEB1-224ENST00000606161 FOXK1P85037 733 aa8.17□□□□□ -1.1
ZEB1-224ENST00000606161 DSG2Q14126 1118 aa8.17□□□□□ -1.1
ZEB1-224ENST00000606161 GTPBP6O43824 516 aaPredicted RBP8.16□□□□□ -1.1
ZEB1-224ENST00000606161 GPHNQ9NQX3 736 aaPredicted RBP8.16□□□□□ -1.1
ZEB1-224ENST00000606161 KDM4FA0A1W2PPD8 638 aa8.15□□□□□ -1.1
ZEB1-224ENST00000606161 PLPP6Q8IY26 295 aa8.15□□□□□ -1.1
ZEB1-224ENST00000606161 LHX6Q9UPM6 363 aa8.14□□□□□ -1.11
ZEB1-224ENST00000606161 POTEEQ6S8J3 1075 aa8.13□□□□□ -1.11
ZEB1-224ENST00000606161 PTCD2Q8WV60 388 aaKnown RBP8.13□□□□□ -1.11
ZEB1-224ENST00000606161 CRISPLD2Q9H0B8 497 aa8.13□□□□□ -1.11
ZEB1-224ENST00000606161 NCKAP5LQ9HCH0 1330 aa8.12□□□□□ -1.11
ZEB1-224ENST00000606161 DCAF8L2P0C7V8 631 aa8.11□□□□□ -1.11
ZEB1-224ENST00000606161 RYDENQ9NUL5 291 aaKnown RBP8.09□□□□□ -1.11
ZEB1-224ENST00000606161 AXIN2Q9Y2T1 843 aa8.07□□□□□ -1.12
ZEB1-224ENST00000606161 LSM11P83369 360 aaKnown RBP eCLIP8.05□□□□□ -1.12
ZEB1-224ENST00000606161 PPP1R15BQ5SWA1 713 aa8.05□□□□□ -1.12
ZEB1-224ENST00000606161 CADPS2Q86UW7 1296 aa8.05□□□□□ -1.12
ZEB1-224ENST00000606161 OXER1Q8TDS5 423 aa8.05□□□□□ -1.12
ZEB1-224ENST00000606161 UPF1Q92900 1129 aaKnown RBP eCLIP8.04□□□□□ -1.12
ZEB1-224ENST00000606161 ANKRD13DQ6ZTN6 518 aa8.03□□□□□ -1.12
ZEB1-224ENST00000606161 PBX2P40425 430 aa8.02□□□□□ -1.13
ZEB1-224ENST00000606161 RNF166Q96A37 237 aaPredicted RBP8.02□□□□□ -1.13
ZEB1-224ENST00000606161 MYT1LQ9UL68 1186 aa8.02□□□□□ -1.13
ZEB1-224ENST00000606161 MFSD10Q14728 455 aa8.01□□□□□ -1.13
ZEB1-224ENST00000606161 PDE4AP27815 886 aa8□□□□□ -1.13
ZEB1-224ENST00000606161 LARP6Q9BRS8 491 aaKnown RBP8□□□□□ -1.13
ZEB1-224ENST00000606161 RTN4Q9NQC3 1192 aaKnown RBP8□□□□□ -1.13
ZEB1-224ENST00000606161 DMRTA1Q5VZB9 504 aa7.99□□□□□ -1.13
ZEB1-224ENST00000606161 DDX27Q96GQ7 796 aaKnown RBP7.99□□□□□ -1.13
ZEB1-224ENST00000606161 PSDA5PKW4 1024 aaPredicted RBP7.98□□□□□ -1.13
ZEB1-224ENST00000606161 PSEN2P49810 448 aa7.98□□□□□ -1.13
ZEB1-224ENST00000606161 EMILIN3Q9NT22 766 aa7.98□□□□□ -1.13
ZEB1-224ENST00000606161 ARHGAP33O14559 1287 aa7.97□□□□□ -1.13
ZEB1-224ENST00000606161 TBC1D12O60347 775 aa7.97□□□□□ -1.13
ZEB1-224ENST00000606161 PTGER2P43116 358 aa7.96□□□□□ -1.14
ZEB1-224ENST00000606161 PPP4R3BQ5MIZ7 849 aa7.95□□□□□ -1.14
ZEB1-224ENST00000606161 ADGRD1Q6QNK2 874 aa7.95□□□□□ -1.14
ZEB1-224ENST00000606161 BBXQ8WY36 941 aaPredicted RBP7.95□□□□□ -1.14
ZEB1-224ENST00000606161 AMER1Q5JTC6 1135 aaPredicted RBP7.94□□□□□ -1.14
ZEB1-224ENST00000606161 HRO43593 1189 aa7.93□□□□□ -1.14
ZEB1-224ENST00000606161 EVI5O60447 810 aa7.93□□□□□ -1.14
ZEB1-224ENST00000606161 ZNF454Q8N9F8 522 aa7.93□□□□□ -1.14
ZEB1-224ENST00000606161 ANO8Q9HCE9 1232 aaPredicted RBP7.93□□□□□ -1.14
ZEB1-224ENST00000606161 FOSBP53539 338 aa7.92□□□□□ -1.14
ZEB1-224ENST00000606161 KCNK17Q96T54 332 aa7.92□□□□□ -1.14
ZEB1-224ENST00000606161 TK2O00142 265 aa7.9□□□□□ -1.14
ZEB1-224ENST00000606161 CAMK2BQ13554 666 aa7.89□□□□□ -1.15
ZEB1-224ENST00000606161 JPH4Q96JJ6 628 aa7.89□□□□□ -1.15
ZEB1-224ENST00000606161 BCL2L12Q9HB09 334 aa7.89□□□□□ -1.15
ZEB1-224ENST00000606161 ADAM33Q9BZ11 813 aa7.88□□□□□ -1.15
ZEB1-224ENST00000606161 MAP3K9P80192 1104 aa7.87□□□□□ -1.15
ZEB1-224ENST00000606161 VPS9D1Q9Y2B5 631 aa7.86□□□□□ -1.15
ZEB1-224ENST00000606161 PCDHGA10Q9Y5H3 936 aa7.85□□□□□ -1.15
ZEB1-224ENST00000606161 DPYSL4O14531 572 aa7.84□□□□□ -1.15
ZEB1-224ENST00000606161 SPRYD3Q8NCJ5 442 aa7.84□□□□□ -1.15
ZEB1-224ENST00000606161 ZDHHC16Q969W1 377 aa7.84□□□□□ -1.15
ZEB1-224ENST00000606161 ZBED2Q9BTP6 218 aa7.83□□□□□ -1.16
ZEB1-224ENST00000606161 BHMG1C9JSJ3 638 aaPredicted RBP7.82□□□□□ -1.16
ZEB1-224ENST00000606161 PTPREP23469 700 aa7.82□□□□□ -1.16
ZEB1-224ENST00000606161 SLC4A5Q9BY07 1137 aa7.82□□□□□ -1.16
ZEB1-224ENST00000606161 COL9A1P20849 921 aa7.8□□□□□ -1.16
ZEB1-224ENST00000606161 PAXIP1Q6ZW49 1069 aaPredicted RBP7.8□□□□□ -1.16
ZEB1-224ENST00000606161 KCNH8Q96L42 1107 aa7.8□□□□□ -1.16
ZEB1-224ENST00000606161 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.8□□□□□ -1.16
ZEB1-224ENST00000606161 PHF14O94880 888 aa7.79□□□□□ -1.16
ZEB1-224ENST00000606161 KCTD12Q96CX2 325 aaKnown RBP7.79□□□□□ -1.16
ZEB1-224ENST00000606161 CFAP44Q96MT7 982 aa7.79□□□□□ -1.16
ZEB1-224ENST00000606161 PROX2Q3B8N5 592 aa7.77□□□□□ -1.17
ZEB1-224ENST00000606161 HCSTQ9UBK5 93 aa7.77□□□□□ -1.17
ZEB1-224ENST00000606161 PPP1R3GB7ZBB8 358 aa7.76□□□□□ -1.17
ZEB1-224ENST00000606161 TYW1BQ6NUM6 668 aa7.76□□□□□ -1.17
ZEB1-224ENST00000606161 PDIA6Q15084 440 aa7.75□□□□□ -1.17
ZEB1-224ENST00000606161 DDX12PQ92771 950 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms