RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 FANCAO15360 1455 aa22.28■■□□□ 1.16
CTSA-211ENST00000606066 PTPRMP28827 1452 aa22.28■■□□□ 1.16
CTSA-211ENST00000606066 CCNB3Q8WWL7 1395 aa22.27■■□□□ 1.16
CTSA-211ENST00000606066 KANK4Q5T7N3 995 aaPredicted RBP22.27■■□□□ 1.16
CTSA-211ENST00000606066 FBXO41Q8TF61 875 aa22.26■■□□□ 1.15
CTSA-211ENST00000606066 ARID4BQ4LE39 1312 aaPredicted RBP22.26■■□□□ 1.15
CTSA-211ENST00000606066 AKNAQ7Z591 1439 aa22.25■■□□□ 1.15
CTSA-211ENST00000606066 ARHGAP5Q13017 1502 aa22.24■■□□□ 1.15
CTSA-211ENST00000606066 CFAP74Q9C0B2 1584 aa22.24■■□□□ 1.15
CTSA-211ENST00000606066 MYO5CQ9NQX4 1742 aa22.23■■□□□ 1.15
CTSA-211ENST00000606066 GPATCH8Q9UKJ3 1502 aaKnown RBP22.22■■□□□ 1.15
CTSA-211ENST00000606066 CFDP1Q9UEE9 299 aaPredicted RBP22.22■■□□□ 1.15
CTSA-211ENST00000606066 NCOA2Q15596 1464 aa22.22■■□□□ 1.15
CTSA-211ENST00000606066 SUPT6HQ7KZ85 1726 aaKnown RBP22.2■■□□□ 1.14
CTSA-211ENST00000606066 DENND4BO75064 1496 aaPredicted RBP22.2■■□□□ 1.14
CTSA-211ENST00000606066 ADAMTSL3P82987 1691 aa22.19■■□□□ 1.14
CTSA-211ENST00000606066 PREX2Q70Z35 1606 aa22.17■■□□□ 1.14
CTSA-211ENST00000606066 ZNF777Q9ULD5 760 aaPredicted RBP22.17■■□□□ 1.14
CTSA-211ENST00000606066 SCAPERQ9BY12 1400 aa22.15■■□□□ 1.14
CTSA-211ENST00000606066 CDC42BPAQ5VT25 1732 aa22.13■■□□□ 1.13
CTSA-211ENST00000606066 CDC42BPBQ9Y5S2 1711 aa22.13■■□□□ 1.13
CTSA-211ENST00000606066 FRMPD1Q5SYB0 1578 aa22.12■■□□□ 1.13
CTSA-211ENST00000606066 ITSN2Q9NZM3 1697 aa22.1■■□□□ 1.13
CTSA-211ENST00000606066 PLEKHH2Q8IVE3 1493 aa22.09■■□□□ 1.13
CTSA-211ENST00000606066 POGZQ7Z3K3 1410 aa22.09■■□□□ 1.13
CTSA-211ENST00000606066 MAGI2Q86UL8 1455 aa22.09■■□□□ 1.13
CTSA-211ENST00000606066 MYOM3Q5VTT5 1437 aa22.07■■□□□ 1.12
CTSA-211ENST00000606066 KIAA1107Q9UPP5 1409 aa22.07■■□□□ 1.12
CTSA-211ENST00000606066 BCORL1Q5H9F3 1711 aa22.07■■□□□ 1.12
CTSA-211ENST00000606066 LMTK3Q96Q04 1460 aa22.07■■□□□ 1.12
CTSA-211ENST00000606066 ABCC1P33527 1531 aa22.06■■□□□ 1.12
CTSA-211ENST00000606066 MIA2Q96PC5 1412 aa22.06■■□□□ 1.12
CTSA-211ENST00000606066 ZNF518AQ6AHZ1 1483 aa22.05■■□□□ 1.12
CTSA-211ENST00000606066 HNRNPMP52272 730 aaKnown RBP eCLIP22.04■■□□□ 1.12
CTSA-211ENST00000606066 AFAP1Q8N556 730 aa22.04■■□□□ 1.12
CTSA-211ENST00000606066 ZNF644Q9H582 1327 aaPredicted RBP22.04■■□□□ 1.12
CTSA-211ENST00000606066 SAMD9LQ8IVG5 1584 aa22.04■■□□□ 1.12
CTSA-211ENST00000606066 ARHGEF40Q8TER5 1519 aa22.03■■□□□ 1.12
CTSA-211ENST00000606066 YEATS2Q9ULM3 1422 aa22.03■■□□□ 1.12
CTSA-211ENST00000606066 RSPH4AQ5TD94 716 aa22.02■■□□□ 1.12
CTSA-211ENST00000606066 MADDQ8WXG6 1647 aa22.02■■□□□ 1.11
CTSA-211ENST00000606066 ARHGEF12Q9NZN5 1544 aa22.01■■□□□ 1.11
CTSA-211ENST00000606066 HSPA2P54652 639 aa22.01■■□□□ 1.11
CTSA-211ENST00000606066 MYT1LQ9UL68 1186 aa22.01■■□□□ 1.11
CTSA-211ENST00000606066 ZMYM4Q5VZL5 1548 aa22.01■■□□□ 1.11
CTSA-211ENST00000606066 TRAPPC8Q9Y2L5 1435 aa22■■□□□ 1.11
CTSA-211ENST00000606066 PPARGC1BQ86YN6 1023 aaKnown RBP22■■□□□ 1.11
CTSA-211ENST00000606066 RICTORQ6R327 1708 aa22■■□□□ 1.11
CTSA-211ENST00000606066 SYCP2Q9BX26 1530 aa21.99■■□□□ 1.11
CTSA-211ENST00000606066 CAMSAP2Q08AD1 1489 aa21.98■■□□□ 1.11
CTSA-211ENST00000606066 MLECQ14165 292 aa21.98■■□□□ 1.11
CTSA-211ENST00000606066 ZFYVE16Q7Z3T8 1539 aa21.96■■□□□ 1.11
CTSA-211ENST00000606066 FGD6Q6ZV73 1430 aa21.96■■□□□ 1.11
CTSA-211ENST00000606066 MBD5Q9P267 1494 aa21.96■■□□□ 1.11
CTSA-211ENST00000606066 SPAG9O60271 1321 aaKnown RBP21.95■■□□□ 1.1
CTSA-211ENST00000606066 ATP10AO60312 1499 aa21.95■■□□□ 1.1
CTSA-211ENST00000606066 KDM5CP41229 1560 aa21.95■■□□□ 1.1
CTSA-211ENST00000606066 PLPPR3Q6T4P5 718 aa21.94■■□□□ 1.1
CTSA-211ENST00000606066 MLH3Q9UHC1 1453 aa21.94■■□□□ 1.1
CTSA-211ENST00000606066 TSPY4P0CV99 314 aa21.92■■□□□ 1.1
CTSA-211ENST00000606066 TSPY10P0CW01 314 aa21.92■■□□□ 1.1
CTSA-211ENST00000606066 CERKQ8TCT0 537 aa21.91■■□□□ 1.1
CTSA-211ENST00000606066 CCDC141Q6ZP82 1450 aa21.9■■□□□ 1.1
CTSA-211ENST00000606066 TCOF1Q13428 1488 aaKnown RBP21.89■■□□□ 1.09
CTSA-211ENST00000606066 PTPN23Q9H3S7 1636 aa21.88■■□□□ 1.09
CTSA-211ENST00000606066 C9orf84Q5VXU9 1444 aa21.88■■□□□ 1.09
CTSA-211ENST00000606066 ARHGEF5Q12774 1597 aa21.87■■□□□ 1.09
CTSA-211ENST00000606066 FAM50AQ14320 339 aaKnown RBP21.87■■□□□ 1.09
CTSA-211ENST00000606066 RIMS1Q86UR5 1692 aaKnown RBP21.87■■□□□ 1.09
CTSA-211ENST00000606066 RTEL1-TNFRSF6BF6WH68 1400 aa21.86■■□□□ 1.09
CTSA-211ENST00000606066 CEBPAP49715 358 aaPredicted RBP21.85■■□□□ 1.09
CTSA-211ENST00000606066 DMRT2Q9Y5R5 561 aa21.85■■□□□ 1.09
CTSA-211ENST00000606066 ATP7AQ04656 1500 aa21.82■■□□□ 1.08
CTSA-211ENST00000606066 SIGLEC1Q9BZZ2 1709 aa21.8■■□□□ 1.08
CTSA-211ENST00000606066 ABCC5O15440 1437 aa21.8■■□□□ 1.08
CTSA-211ENST00000606066 INO80Q9ULG1 1556 aaPredicted RBP21.79■■□□□ 1.08
CTSA-211ENST00000606066 DIP2CQ9Y2E4 1556 aa21.79■■□□□ 1.08
CTSA-211ENST00000606066 DAPK1P53355 1430 aa21.79■■□□□ 1.08
CTSA-211ENST00000606066 KIDINS220Q9ULH0 1771 aa21.79■■□□□ 1.08
CTSA-211ENST00000606066 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.78■■□□□ 1.08
CTSA-211ENST00000606066 ABCA6Q8N139 1617 aa21.77■■□□□ 1.07
CTSA-211ENST00000606066 REREQ9P2R6 1566 aa21.76■■□□□ 1.07
CTSA-211ENST00000606066 SHANK2Q9UPX8 1470 aa21.76■■□□□ 1.07
CTSA-211ENST00000606066 MAST1Q9Y2H9 1570 aa21.74■■□□□ 1.07
CTSA-211ENST00000606066 RRBP1Q9P2E9 1410 aaKnown RBP21.74■■□□□ 1.07
CTSA-211ENST00000606066 DNMT1P26358 1616 aaKnown RBP21.74■■□□□ 1.07
CTSA-211ENST00000606066 A2MP01023 1474 aa21.74■■□□□ 1.07
CTSA-211ENST00000606066 DHX29Q7Z478 1369 aaKnown RBP21.73■■□□□ 1.07
CTSA-211ENST00000606066 CHIC2Q9UKJ5 165 aa21.71■■□□□ 1.07
CTSA-211ENST00000606066 UHRF1BP1Q6BDS2 1440 aa21.71■■□□□ 1.07
CTSA-211ENST00000606066 AGLP35573 1532 aa21.7■■□□□ 1.07
CTSA-211ENST00000606066 ESF1Q9H501 851 aaKnown RBP21.7■■□□□ 1.06
CTSA-211ENST00000606066 ANKRD30AQ9BXX3 1397 aa21.7■■□□□ 1.06
CTSA-211ENST00000606066 FER1L4A9Z1Z3 1794 aa21.67■■□□□ 1.06
CTSA-211ENST00000606066 ADGBQ8N7X0 1667 aa21.67■■□□□ 1.06
CTSA-211ENST00000606066 ITGAEP38570 1179 aa21.67■■□□□ 1.06
CTSA-211ENST00000606066 RRP7BPQ9NSQ0 103 aa21.67■■□□□ 1.06
CTSA-211ENST00000606066 KIF15Q9NS87 1388 aa21.66■■□□□ 1.06
CTSA-211ENST00000606066 CROCC2H7BZ55 1655 aa21.66■■□□□ 1.06
CTSA-211ENST00000606066 PLXNC1O60486 1568 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms