RNA–Protein interactions for RNA: ENST00000603844.1

FOCAD-210, Transcript of focadhesin, humanhuman

TSL 3

Gene FOCAD, Length 693 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-210ENST00000603844 BCL11BQ9C0K0 894 aaPredicted RBP13.44□□□□□ -0.26
FOCAD-210ENST00000603844 NLRP6P59044 892 aa13.43□□□□□ -0.26
FOCAD-210ENST00000603844 ZSWIM6Q9HCJ5 1215 aa13.43□□□□□ -0.26
FOCAD-210ENST00000603844 FBXO22Q8NEZ5 403 aa13.41□□□□□ -0.26
FOCAD-210ENST00000603844 STK24Q9Y6E0 443 aa13.39□□□□□ -0.27
FOCAD-210ENST00000603844 GPR153Q6NV75 609 aa13.37□□□□□ -0.27
FOCAD-210ENST00000603844 VARS2Q5ST30 1063 aaKnown RBP13.36□□□□□ -0.27
FOCAD-210ENST00000603844 ECM2O94769 699 aaPredicted RBP13.35□□□□□ -0.27
FOCAD-210ENST00000603844 MFRPQ9BY79 579 aa13.34□□□□□ -0.27
FOCAD-210ENST00000603844 STK25O00506 426 aa13.33□□□□□ -0.28
FOCAD-210ENST00000603844 ZNF687Q8N1G0 1237 aa13.29□□□□□ -0.28
FOCAD-210ENST00000603844 PKD2Q13563 968 aa13.27□□□□□ -0.29
FOCAD-210ENST00000603844 ARSIQ5FYB1 569 aa13.27□□□□□ -0.29
FOCAD-210ENST00000603844 RGL2O15211 777 aa13.25□□□□□ -0.29
FOCAD-210ENST00000603844 KIF3CO14782 793 aa13.23□□□□□ -0.29
FOCAD-210ENST00000603844 C2orf72A6NCS6 295 aa13.21□□□□□ -0.29
FOCAD-210ENST00000603844 ZNF316A6NFI3 1004 aaPredicted RBP13.19□□□□□ -0.3
FOCAD-210ENST00000603844 KHSRPQ92945 711 aaKnown RBP eCLIP13.19□□□□□ -0.3
FOCAD-210ENST00000603844 RNF166Q96A37 237 aaPredicted RBP13.17□□□□□ -0.3
FOCAD-210ENST00000603844 MYT1LQ9UL68 1186 aa13.15□□□□□ -0.3
FOCAD-210ENST00000603844 SLC34A2O95436 690 aa13.12□□□□□ -0.31
FOCAD-210ENST00000603844 TMC2Q8TDI7 906 aa13.12□□□□□ -0.31
FOCAD-210ENST00000603844 PTGER2P43116 358 aa13.11□□□□□ -0.31
FOCAD-210ENST00000603844 NUDT7P0C024 238 aa13.09□□□□□ -0.31
FOCAD-210ENST00000603844 PCDHGA4Q9Y5G9 962 aa13.09□□□□□ -0.31
FOCAD-210ENST00000603844 PPP1R37O75864 691 aa13.08□□□□□ -0.32
FOCAD-210ENST00000603844 ANKRD13DQ6ZTN6 518 aa13.07□□□□□ -0.32
FOCAD-210ENST00000603844 LSM11P83369 360 aaKnown RBP eCLIP13.05□□□□□ -0.32
FOCAD-210ENST00000603844 PBX2P40425 430 aa13.04□□□□□ -0.32
FOCAD-210ENST00000603844 LHX6Q9UPM6 363 aa13.04□□□□□ -0.32
FOCAD-210ENST00000603844 HS6ST3Q8IZP7 471 aa12.99□□□□□ -0.33
FOCAD-210ENST00000603844 POTEEQ6S8J3 1075 aa12.97□□□□□ -0.33
FOCAD-210ENST00000603844 PSDA5PKW4 1024 aaPredicted RBP12.94□□□□□ -0.34
FOCAD-210ENST00000603844 FOXK1P85037 733 aa12.94□□□□□ -0.34
FOCAD-210ENST00000603844 PTCD2Q8WV60 388 aaKnown RBP12.94□□□□□ -0.34
FOCAD-210ENST00000603844 AXIN2Q9Y2T1 843 aa12.94□□□□□ -0.34
FOCAD-210ENST00000603844 KDM4FA0A1W2PPD8 638 aa12.93□□□□□ -0.34
FOCAD-210ENST00000603844 GPHNQ9NQX3 736 aaPredicted RBP12.92□□□□□ -0.34
FOCAD-210ENST00000603844 PLPP6Q8IY26 295 aa12.91□□□□□ -0.34
FOCAD-210ENST00000603844 ARHGAP33O14559 1287 aa12.88□□□□□ -0.35
FOCAD-210ENST00000603844 CHGAP10645 457 aaKnown RBP12.88□□□□□ -0.35
FOCAD-210ENST00000603844 DSG2Q14126 1118 aa12.86□□□□□ -0.35
FOCAD-210ENST00000603844 DNAJC5Q9H3Z4 198 aa12.85□□□□□ -0.35
FOCAD-210ENST00000603844 TBC1D12O60347 775 aa12.84□□□□□ -0.35
FOCAD-210ENST00000603844 ADGRD1Q6QNK2 874 aa12.84□□□□□ -0.35
FOCAD-210ENST00000603844 NKX1-1Q15270 411 aaPredicted RBP12.81□□□□□ -0.36
FOCAD-210ENST00000603844 TK2O00142 265 aa12.8□□□□□ -0.36
FOCAD-210ENST00000603844 RYDENQ9NUL5 291 aaKnown RBP12.8□□□□□ -0.36
FOCAD-210ENST00000603844 PPP4R3BQ5MIZ7 849 aa12.79□□□□□ -0.36
FOCAD-210ENST00000603844 DMRTA1Q5VZB9 504 aa12.77□□□□□ -0.37
FOCAD-210ENST00000603844 PSEN2P49810 448 aa12.76□□□□□ -0.37
FOCAD-210ENST00000603844 HCSTQ9UBK5 93 aa12.76□□□□□ -0.37
FOCAD-210ENST00000603844 HRO43593 1189 aa12.75□□□□□ -0.37
FOCAD-210ENST00000603844 OXER1Q8TDS5 423 aa12.74□□□□□ -0.37
FOCAD-210ENST00000603844 CRISPLD2Q9H0B8 497 aa12.74□□□□□ -0.37
FOCAD-210ENST00000603844 UPF1Q92900 1129 aaKnown RBP eCLIP12.69□□□□□ -0.38
FOCAD-210ENST00000603844 KCNH8Q96L42 1107 aa12.69□□□□□ -0.38
FOCAD-210ENST00000603844 PPP1R15BQ5SWA1 713 aa12.68□□□□□ -0.38
FOCAD-210ENST00000603844 KCNK17Q96T54 332 aa12.68□□□□□ -0.38
FOCAD-210ENST00000603844 PLA2G2EQ9NZK7 142 aa12.68□□□□□ -0.38
FOCAD-210ENST00000603844 PDE4AP27815 886 aa12.65□□□□□ -0.38
FOCAD-210ENST00000603844 NCKAP5LQ9HCH0 1330 aa12.64□□□□□ -0.39
FOCAD-210ENST00000603844 ZNF454Q8N9F8 522 aa12.64□□□□□ -0.39
FOCAD-210ENST00000603844 STAC3Q96MF2 364 aa12.64□□□□□ -0.39
FOCAD-210ENST00000603844 BCL2L12Q9HB09 334 aa12.62□□□□□ -0.39
FOCAD-210ENST00000603844 VPS9D1Q9Y2B5 631 aa12.62□□□□□ -0.39
FOCAD-210ENST00000603844 KCTD12Q96CX2 325 aaKnown RBP12.61□□□□□ -0.39
FOCAD-210ENST00000603844 GTPBP6O43824 516 aaPredicted RBP12.6□□□□□ -0.39
FOCAD-210ENST00000603844 FOSBP53539 338 aa12.6□□□□□ -0.39
FOCAD-210ENST00000603844 SLC4A5Q9BY07 1137 aa12.6□□□□□ -0.39
FOCAD-210ENST00000603844 ANO8Q9HCE9 1232 aaPredicted RBP12.59□□□□□ -0.39
FOCAD-210ENST00000603844 PTPREP23469 700 aa12.55□□□□□ -0.4
FOCAD-210ENST00000603844 JPH4Q96JJ6 628 aa12.55□□□□□ -0.4
FOCAD-210ENST00000603844 LARP6Q9BRS8 491 aaKnown RBP12.55□□□□□ -0.4
FOCAD-210ENST00000603844 EVI5O60447 810 aa12.54□□□□□ -0.4
FOCAD-210ENST00000603844 DDX27Q96GQ7 796 aaKnown RBP12.54□□□□□ -0.4
FOCAD-210ENST00000603844 MFSD10Q14728 455 aa12.52□□□□□ -0.41
FOCAD-210ENST00000603844 BHMG1C9JSJ3 638 aaPredicted RBP12.51□□□□□ -0.41
FOCAD-210ENST00000603844 ZBED2Q9BTP6 218 aa12.51□□□□□ -0.41
FOCAD-210ENST00000603844 ZDHHC16Q969W1 377 aa12.5□□□□□ -0.41
FOCAD-210ENST00000603844 MAP3K9P80192 1104 aa12.48□□□□□ -0.41
FOCAD-210ENST00000603844 ADAM33Q9BZ11 813 aa12.48□□□□□ -0.41
FOCAD-210ENST00000603844 PTPN5P54829 565 aa12.47□□□□□ -0.41
FOCAD-210ENST00000603844 EMILIN3Q9NT22 766 aa12.45□□□□□ -0.42
FOCAD-210ENST00000603844 THSD4Q6ZMP0 1018 aa12.44□□□□□ -0.42
FOCAD-210ENST00000603844 MRPL50Q8N5N7 158 aaKnown RBP12.44□□□□□ -0.42
FOCAD-210ENST00000603844 GOLGA8CPA6NN73 597 aa12.43□□□□□ -0.42
FOCAD-210ENST00000603844 DCAF8L2P0C7V8 631 aa12.42□□□□□ -0.42
FOCAD-210ENST00000603844 WNT2BQ93097 391 aa12.41□□□□□ -0.42
FOCAD-210ENST00000603844 NBPF3Q9H094 633 aa12.41□□□□□ -0.42
FOCAD-210ENST00000603844 PCDHGA10Q9Y5H3 936 aa12.4□□□□□ -0.42
FOCAD-210ENST00000603844 IFFO2Q5TF58 517 aa12.39□□□□□ -0.43
FOCAD-210ENST00000603844 CADPS2Q86UW7 1296 aa12.39□□□□□ -0.43
FOCAD-210ENST00000603844 PPP1R3GB7ZBB8 358 aa12.38□□□□□ -0.43
FOCAD-210ENST00000603844 PHF14O94880 888 aa12.35□□□□□ -0.43
FOCAD-210ENST00000603844 TYW1BQ6NUM6 668 aa12.35□□□□□ -0.43
FOCAD-210ENST00000603844 FBXW7Q969H0 707 aa12.35□□□□□ -0.43
FOCAD-210ENST00000603844 RABGEF1Q9UJ41 708 aa12.35□□□□□ -0.43
FOCAD-210ENST00000603844 COL9A1P20849 921 aa12.32□□□□□ -0.44
FOCAD-210ENST00000603844 CAMK2BQ13554 666 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms