RNA–Protein interactions for RNA: ENST00000603492.1

FOCAD-204, Transcript of focadhesin, humanhuman

TSL 4

Gene FOCAD, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOCAD-204ENST00000603492 NUP153P49790 1475 aaKnown RBP10.38□□□□□ -0.75
FOCAD-204ENST00000603492 KCNH8Q96L42 1107 aa10.38□□□□□ -0.75
FOCAD-204ENST00000603492 ATP1B4Q9UN42 357 aaPredicted RBP10.38□□□□□ -0.75
FOCAD-204ENST00000603492 CLIP1P30622 1438 aa10.38□□□□□ -0.75
FOCAD-204ENST00000603492 REM2Q8IYK8 340 aaPredicted RBP10.37□□□□□ -0.75
FOCAD-204ENST00000603492 DIP2BQ9P265 1576 aa10.36□□□□□ -0.75
FOCAD-204ENST00000603492 FMN1Q68DA7 1419 aa10.34□□□□□ -0.75
FOCAD-204ENST00000603492 EPRSP07814 1512 aaKnown RBP10.34□□□□□ -0.75
FOCAD-204ENST00000603492 ZEB1P37275 1124 aaPredicted RBP10.34□□□□□ -0.75
FOCAD-204ENST00000603492 TSPOAP1O95153 1857 aa10.34□□□□□ -0.75
FOCAD-204ENST00000603492 WDR7Q9Y4E6 1490 aa10.33□□□□□ -0.76
FOCAD-204ENST00000603492 CDK13Q14004 1512 aaKnown RBP10.33□□□□□ -0.76
FOCAD-204ENST00000603492 LRRIQ1Q96JM4 1722 aa10.32□□□□□ -0.76
FOCAD-204ENST00000603492 GLI2P10070 1586 aa10.31□□□□□ -0.76
FOCAD-204ENST00000603492 PLEKHD1A6NEE1 506 aa10.3□□□□□ -0.76
FOCAD-204ENST00000603492 CASKIN1Q8WXD9 1431 aa10.29□□□□□ -0.76
FOCAD-204ENST00000603492 PCF11O94913 1555 aaKnown RBP10.29□□□□□ -0.76
FOCAD-204ENST00000603492 PPRC1Q5VV67 1664 aaKnown RBP10.28□□□□□ -0.76
FOCAD-204ENST00000603492 HECW1Q76N89 1606 aa10.28□□□□□ -0.76
FOCAD-204ENST00000603492 MAP3K4Q9Y6R4 1608 aa10.28□□□□□ -0.76
FOCAD-204ENST00000603492 ZBTB12Q9Y330 459 aaPredicted RBP10.27□□□□□ -0.77
FOCAD-204ENST00000603492 CD109Q6YHK3 1445 aa10.26□□□□□ -0.77
FOCAD-204ENST00000603492 PITPNM1O00562 1244 aa10.26□□□□□ -0.77
FOCAD-204ENST00000603492 FXR2P51116 673 aaKnown RBP eCLIP10.26□□□□□ -0.77
FOCAD-204ENST00000603492 CFAP43Q8NDM7 1665 aa10.24□□□□□ -0.77
FOCAD-204ENST00000603492 VPS8Q8N3P4 1428 aa10.24□□□□□ -0.77
FOCAD-204ENST00000603492 FYCO1Q9BQS8 1478 aa10.23□□□□□ -0.77
FOCAD-204ENST00000603492 MAGI3Q5TCQ9 1506 aa10.23□□□□□ -0.77
FOCAD-204ENST00000603492 ABCA9Q8IUA7 1624 aa10.23□□□□□ -0.77
FOCAD-204ENST00000603492 EVX2Q03828 476 aa10.23□□□□□ -0.77
FOCAD-204ENST00000603492 CDK11AQ9UQ88 783 aaPredicted RBP10.23□□□□□ -0.77
FOCAD-204ENST00000603492 COL17A1Q9UMD9 1497 aaPredicted RBP10.23□□□□□ -0.77
FOCAD-204ENST00000603492 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.23□□□□□ -0.77
FOCAD-204ENST00000603492 ATXN8OSP0DMR3 200 aa10.22□□□□□ -0.77
FOCAD-204ENST00000603492 TROQ12816 1431 aaPredicted RBP10.21□□□□□ -0.78
FOCAD-204ENST00000603492 CCDC18Q5T9S5 1454 aa10.21□□□□□ -0.78
FOCAD-204ENST00000603492 KIF14Q15058 1648 aa10.21□□□□□ -0.78
FOCAD-204ENST00000603492 TTC37Q6PGP7 1564 aa10.2□□□□□ -0.78
FOCAD-204ENST00000603492 KDM6BO15054 1643 aa10.19□□□□□ -0.78
FOCAD-204ENST00000603492 TEX14Q8IWB6 1497 aa10.18□□□□□ -0.78
FOCAD-204ENST00000603492 KANK4Q5T7N3 995 aaPredicted RBP10.17□□□□□ -0.78
FOCAD-204ENST00000603492 PLCH2O75038 1416 aa10.16□□□□□ -0.78
FOCAD-204ENST00000603492 RAPGEF3O95398 923 aa10.16□□□□□ -0.78
FOCAD-204ENST00000603492 MTUS2Q5JR59 1369 aa10.14□□□□□ -0.79
FOCAD-204ENST00000603492 FANCAO15360 1455 aa10.14□□□□□ -0.79
FOCAD-204ENST00000603492 AKNAQ7Z591 1439 aa10.14□□□□□ -0.79
FOCAD-204ENST00000603492 CDC42BPBQ9Y5S2 1711 aa10.13□□□□□ -0.79
FOCAD-204ENST00000603492 NEO1Q92859 1461 aa10.13□□□□□ -0.79
FOCAD-204ENST00000603492 EFCAB2Q5VUJ9 269 aa10.13□□□□□ -0.79
FOCAD-204ENST00000603492 TIAM1Q13009 1591 aa10.13□□□□□ -0.79
FOCAD-204ENST00000603492 MYO5CQ9NQX4 1742 aa10.13□□□□□ -0.79
FOCAD-204ENST00000603492 ARAP3Q8WWN8 1544 aa10.12□□□□□ -0.79
FOCAD-204ENST00000603492 PPARGC1BQ86YN6 1023 aaKnown RBP10.12□□□□□ -0.79
FOCAD-204ENST00000603492 CDC42BPAQ5VT25 1732 aa10.11□□□□□ -0.79
FOCAD-204ENST00000603492 GPATCH8Q9UKJ3 1502 aaKnown RBP10.11□□□□□ -0.79
FOCAD-204ENST00000603492 PHLDB1Q86UU1 1377 aa10.11□□□□□ -0.79
FOCAD-204ENST00000603492 LRRC9Q6ZRR7 1453 aa10.1□□□□□ -0.79
FOCAD-204ENST00000603492 ZNF777Q9ULD5 760 aaPredicted RBP10.1□□□□□ -0.79
FOCAD-204ENST00000603492 ARHGAP5Q13017 1502 aa10.1□□□□□ -0.79
FOCAD-204ENST00000603492 SCAPERQ9BY12 1400 aa10.09□□□□□ -0.79
FOCAD-204ENST00000603492 EHBP1L1Q8N3D4 1523 aa10.09□□□□□ -0.79
FOCAD-204ENST00000603492 AFAP1Q8N556 730 aa10.09□□□□□ -0.79
FOCAD-204ENST00000603492 CCNB3Q8WWL7 1395 aa10.09□□□□□ -0.79
FOCAD-204ENST00000603492 FRMPD1Q5SYB0 1578 aa10.09□□□□□ -0.79
FOCAD-204ENST00000603492 ZNF644Q9H582 1327 aaPredicted RBP10.08□□□□□ -0.8
FOCAD-204ENST00000603492 MAP3K1Q13233 1512 aa10.08□□□□□ -0.8
FOCAD-204ENST00000603492 PREX2Q70Z35 1606 aa10.08□□□□□ -0.8
FOCAD-204ENST00000603492 CFDP1Q9UEE9 299 aaPredicted RBP10.08□□□□□ -0.8
FOCAD-204ENST00000603492 DENND4BO75064 1496 aaPredicted RBP10.08□□□□□ -0.8
FOCAD-204ENST00000603492 ADGRL1O94910 1474 aa10.08□□□□□ -0.8
FOCAD-204ENST00000603492 NCOA2Q15596 1464 aa10.08□□□□□ -0.8
FOCAD-204ENST00000603492 ARHGEF12Q9NZN5 1544 aa10.07□□□□□ -0.8
FOCAD-204ENST00000603492 CFAP74Q9C0B2 1584 aa10.07□□□□□ -0.8
FOCAD-204ENST00000603492 HNRNPMP52272 730 aaKnown RBP eCLIP10.07□□□□□ -0.82e-7■■■■□ 25.4
FOCAD-204ENST00000603492 RICTORQ6R327 1708 aa10.07□□□□□ -0.8
FOCAD-204ENST00000603492 CCER1Q8TC90 406 aaPredicted RBP10.06□□□□□ -0.8
FOCAD-204ENST00000603492 SUPT6HQ7KZ85 1726 aaKnown RBP10.06□□□□□ -0.8
FOCAD-204ENST00000603492 TRAPPC8Q9Y2L5 1435 aa10.05□□□□□ -0.8
FOCAD-204ENST00000603492 SAMD9LQ8IVG5 1584 aa10.05□□□□□ -0.8
FOCAD-204ENST00000603492 KDM4FA0A1W2PPD8 638 aa10.03□□□□□ -0.8
FOCAD-204ENST00000603492 POGZQ7Z3K3 1410 aa10.03□□□□□ -0.8
FOCAD-204ENST00000603492 YEATS2Q9ULM3 1422 aa10.03□□□□□ -0.8
FOCAD-204ENST00000603492 ABCC1P33527 1531 aa10.02□□□□□ -0.8
FOCAD-204ENST00000603492 LHX8Q68G74 356 aa10.02□□□□□ -0.81
FOCAD-204ENST00000603492 ITSN2Q9NZM3 1697 aa10.02□□□□□ -0.81
FOCAD-204ENST00000603492 SYCP2Q9BX26 1530 aa10.01□□□□□ -0.81
FOCAD-204ENST00000603492 ZNF518AQ6AHZ1 1483 aa10□□□□□ -0.81
FOCAD-204ENST00000603492 MBD5Q9P267 1494 aa10□□□□□ -0.81
FOCAD-204ENST00000603492 PRKAR2AP13861 404 aaKnown RBP10□□□□□ -0.81
FOCAD-204ENST00000603492 MYT1LQ9UL68 1186 aa10□□□□□ -0.81
FOCAD-204ENST00000603492 ZMYM4Q5VZL5 1548 aa10□□□□□ -0.81
FOCAD-204ENST00000603492 MYOM3Q5VTT5 1437 aa9.99□□□□□ -0.81
FOCAD-204ENST00000603492 KIAA1107Q9UPP5 1409 aa9.99□□□□□ -0.81
FOCAD-204ENST00000603492 SIGLEC1Q9BZZ2 1709 aa9.99□□□□□ -0.81
FOCAD-204ENST00000603492 KDM5CP41229 1560 aa9.99□□□□□ -0.81
FOCAD-204ENST00000603492 CAMSAP2Q08AD1 1489 aa9.98□□□□□ -0.81
FOCAD-204ENST00000603492 MAGI2Q86UL8 1455 aa9.98□□□□□ -0.81
FOCAD-204ENST00000603492 ZFYVE16Q7Z3T8 1539 aa9.97□□□□□ -0.81
FOCAD-204ENST00000603492 KIDINS220Q9ULH0 1771 aa9.97□□□□□ -0.81
FOCAD-204ENST00000603492 GABBR2O75899 941 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms