RNA–Protein interactions for RNA: ENST00000602905.1

PPFIA3-213, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 799 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-213ENST00000602905 CDC42BPBQ9Y5S2 1711 aa25.09■■□□□ 1.61
PPFIA3-213ENST00000602905 COL17A1Q9UMD9 1497 aaPredicted RBP25.09■■□□□ 1.61
PPFIA3-213ENST00000602905 CCNB3Q8WWL7 1395 aa25.08■■□□□ 1.61
PPFIA3-213ENST00000602905 LRRC9Q6ZRR7 1453 aa25.08■■□□□ 1.6
PPFIA3-213ENST00000602905 DENND4BO75064 1496 aaPredicted RBP25.03■■□□□ 1.6
PPFIA3-213ENST00000602905 ADGRL1O94910 1474 aa25.03■■□□□ 1.6
PPFIA3-213ENST00000602905 ITSN2Q9NZM3 1697 aa25.03■■□□□ 1.6
PPFIA3-213ENST00000602905 GPATCH8Q9UKJ3 1502 aaKnown RBP25.02■■□□□ 1.6
PPFIA3-213ENST00000602905 NCOA2Q15596 1464 aa25.01■■□□□ 1.59
PPFIA3-213ENST00000602905 KANK4Q5T7N3 995 aaPredicted RBP25■■□□□ 1.59
PPFIA3-213ENST00000602905 CFDP1Q9UEE9 299 aaPredicted RBP25■■□□□ 1.59
PPFIA3-213ENST00000602905 RAPGEF3O95398 923 aa24.99■■□□□ 1.59
PPFIA3-213ENST00000602905 SCAPERQ9BY12 1400 aa24.99■■□□□ 1.59
PPFIA3-213ENST00000602905 ZNF777Q9ULD5 760 aaPredicted RBP24.98■■□□□ 1.59
PPFIA3-213ENST00000602905 RICTORQ6R327 1708 aa24.96■■□□□ 1.59
PPFIA3-213ENST00000602905 FRMPD1Q5SYB0 1578 aa24.92■■□□□ 1.58
PPFIA3-213ENST00000602905 ABCC1P33527 1531 aa24.91■■□□□ 1.58
PPFIA3-213ENST00000602905 PLEKHH2Q8IVE3 1493 aa24.91■■□□□ 1.58
PPFIA3-213ENST00000602905 POGZQ7Z3K3 1410 aa24.91■■□□□ 1.58
PPFIA3-213ENST00000602905 SAMD9LQ8IVG5 1584 aa24.9■■□□□ 1.58
PPFIA3-213ENST00000602905 ZNF518AQ6AHZ1 1483 aa24.89■■□□□ 1.57
PPFIA3-213ENST00000602905 MYT1LQ9UL68 1186 aa24.86■■□□□ 1.57
PPFIA3-213ENST00000602905 ZMYM4Q5VZL5 1548 aa24.86■■□□□ 1.57
PPFIA3-213ENST00000602905 KIAA1107Q9UPP5 1409 aa24.85■■□□□ 1.57
PPFIA3-213ENST00000602905 MAGI2Q86UL8 1455 aa24.84■■□□□ 1.57
PPFIA3-213ENST00000602905 SYCP2Q9BX26 1530 aa24.84■■□□□ 1.57
PPFIA3-213ENST00000602905 MYOM3Q5VTT5 1437 aa24.84■■□□□ 1.57
PPFIA3-213ENST00000602905 AFAP1Q8N556 730 aa24.83■■□□□ 1.57
PPFIA3-213ENST00000602905 ARHGEF12Q9NZN5 1544 aa24.82■■□□□ 1.56
PPFIA3-213ENST00000602905 HNRNPMP52272 730 aaKnown RBP eCLIP24.82■■□□□ 1.56
PPFIA3-213ENST00000602905 ZFYVE16Q7Z3T8 1539 aa24.81■■□□□ 1.56
PPFIA3-213ENST00000602905 KDM5CP41229 1560 aa24.8■■□□□ 1.56
PPFIA3-213ENST00000602905 MIA2Q96PC5 1412 aa24.8■■□□□ 1.56
PPFIA3-213ENST00000602905 TRAPPC8Q9Y2L5 1435 aa24.8■■□□□ 1.56
PPFIA3-213ENST00000602905 ZNF644Q9H582 1327 aaPredicted RBP24.8■■□□□ 1.56
PPFIA3-213ENST00000602905 CAMSAP2Q08AD1 1489 aa24.79■■□□□ 1.56
PPFIA3-213ENST00000602905 ARHGEF40Q8TER5 1519 aa24.79■■□□□ 1.56
PPFIA3-213ENST00000602905 HECW2Q9P2P5 1572 aa24.78■■□□□ 1.56
PPFIA3-213ENST00000602905 RSPH4AQ5TD94 716 aa24.75■■□□□ 1.55
PPFIA3-213ENST00000602905 MLH3Q9UHC1 1453 aa24.74■■□□□ 1.55
PPFIA3-213ENST00000602905 YEATS2Q9ULM3 1422 aa24.73■■□□□ 1.55
PPFIA3-213ENST00000602905 SPAG9O60271 1321 aaKnown RBP24.73■■□□□ 1.55
PPFIA3-213ENST00000602905 PTPN23Q9H3S7 1636 aa24.71■■□□□ 1.55
PPFIA3-213ENST00000602905 MBD5Q9P267 1494 aa24.7■■□□□ 1.55
PPFIA3-213ENST00000602905 ARID4BQ4LE39 1312 aaPredicted RBP24.7■■□□□ 1.54
PPFIA3-213ENST00000602905 PPARGC1BQ86YN6 1023 aaKnown RBP24.7■■□□□ 1.54
PPFIA3-213ENST00000602905 ATP10AO60312 1499 aa24.7■■□□□ 1.54
PPFIA3-213ENST00000602905 CCDC141Q6ZP82 1450 aa24.7■■□□□ 1.54
PPFIA3-213ENST00000602905 FGD6Q6ZV73 1430 aa24.69■■□□□ 1.54
PPFIA3-213ENST00000602905 ARHGEF5Q12774 1597 aa24.68■■□□□ 1.54
PPFIA3-213ENST00000602905 KIDINS220Q9ULH0 1771 aa24.68■■□□□ 1.54
PPFIA3-213ENST00000602905 TSPY4P0CV99 314 aa24.67■■□□□ 1.54
PPFIA3-213ENST00000602905 TSPY10P0CW01 314 aa24.67■■□□□ 1.54
PPFIA3-213ENST00000602905 C9orf84Q5VXU9 1444 aa24.67■■□□□ 1.54
PPFIA3-213ENST00000602905 ATP7AQ04656 1500 aa24.66■■□□□ 1.54
PPFIA3-213ENST00000602905 DIP2CQ9Y2E4 1556 aa24.65■■□□□ 1.54
PPFIA3-213ENST00000602905 ABCA6Q8N139 1617 aa24.64■■□□□ 1.54
PPFIA3-213ENST00000602905 INO80Q9ULG1 1556 aaPredicted RBP24.63■■□□□ 1.53
PPFIA3-213ENST00000602905 TCOF1Q13428 1488 aaKnown RBP24.62■■□□□ 1.53
PPFIA3-213ENST00000602905 RTEL1-TNFRSF6BF6WH68 1400 aa24.61■■□□□ 1.53
PPFIA3-213ENST00000602905 FAM50AQ14320 339 aaKnown RBP24.59■■□□□ 1.53
PPFIA3-213ENST00000602905 REREQ9P2R6 1566 aa24.59■■□□□ 1.53
PPFIA3-213ENST00000602905 KDM4FA0A1W2PPD8 638 aa24.58■■□□□ 1.53
PPFIA3-213ENST00000602905 AEBP2Q6ZN18 517 aaPredicted RBP24.58■■□□□ 1.53
PPFIA3-213ENST00000602905 ADGBQ8N7X0 1667 aa24.58■■□□□ 1.53
PPFIA3-213ENST00000602905 BCORL1Q5H9F3 1711 aa24.58■■□□□ 1.52
PPFIA3-213ENST00000602905 MAST1Q9Y2H9 1570 aa24.54■■□□□ 1.52
PPFIA3-213ENST00000602905 DNMT1P26358 1616 aaKnown RBP24.54■■□□□ 1.52
PPFIA3-213ENST00000602905 CROCC2H7BZ55 1655 aa24.53■■□□□ 1.52
PPFIA3-213ENST00000602905 A2MP01023 1474 aa24.53■■□□□ 1.52
PPFIA3-213ENST00000602905 SIGLEC1Q9BZZ2 1709 aa24.53■■□□□ 1.52
PPFIA3-213ENST00000602905 MLECQ14165 292 aa24.53■■□□□ 1.52
PPFIA3-213ENST00000602905 DAPK1P53355 1430 aa24.52■■□□□ 1.52
PPFIA3-213ENST00000602905 AGLP35573 1532 aa24.51■■□□□ 1.51
PPFIA3-213ENST00000602905 ABCC5O15440 1437 aa24.51■■□□□ 1.51
PPFIA3-213ENST00000602905 ADAMTSL3P82987 1691 aa24.5■■□□□ 1.51
PPFIA3-213ENST00000602905 SHANK2Q9UPX8 1470 aa24.5■■□□□ 1.51
PPFIA3-213ENST00000602905 DHX29Q7Z478 1369 aaKnown RBP24.46■■□□□ 1.51
PPFIA3-213ENST00000602905 PLXNC1O60486 1568 aa24.46■■□□□ 1.51
PPFIA3-213ENST00000602905 FER1L4A9Z1Z3 1794 aa24.45■■□□□ 1.5
PPFIA3-213ENST00000602905 MADDQ8WXG6 1647 aa24.45■■□□□ 1.5
PPFIA3-213ENST00000602905 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.44■■□□□ 1.5
PPFIA3-213ENST00000602905 ESF1Q9H501 851 aaKnown RBP24.44■■□□□ 1.5
PPFIA3-213ENST00000602905 CHIC2Q9UKJ5 165 aa24.43■■□□□ 1.5
PPFIA3-213ENST00000602905 ANKRD30AQ9BXX3 1397 aa24.42■■□□□ 1.5
PPFIA3-213ENST00000602905 RIMS1Q86UR5 1692 aaKnown RBP24.42■■□□□ 1.5
PPFIA3-213ENST00000602905 RRBP1Q9P2E9 1410 aaKnown RBP24.41■■□□□ 1.5
PPFIA3-213ENST00000602905 RRP7BPQ9NSQ0 103 aa24.39■■□□□ 1.49
PPFIA3-213ENST00000602905 DUOX2Q9NRD8 1548 aa24.39■■□□□ 1.49
PPFIA3-213ENST00000602905 KIF15Q9NS87 1388 aa24.39■■□□□ 1.49
PPFIA3-213ENST00000602905 KIF3BO15066 747 aa24.38■■□□□ 1.49
PPFIA3-213ENST00000602905 GGT6Q6P531 493 aa24.37■■□□□ 1.49
PPFIA3-213ENST00000602905 ITGAEP38570 1179 aa24.36■■□□□ 1.49
PPFIA3-213ENST00000602905 PTPRMP28827 1452 aa24.36■■□□□ 1.49
PPFIA3-213ENST00000602905 ADGRL2O95490 1459 aa24.34■■□□□ 1.49
PPFIA3-213ENST00000602905 EIF2AK4Q9P2K8 1649 aaKnown RBP24.34■■□□□ 1.49
PPFIA3-213ENST00000602905 PPP6R1Q9UPN7 881 aa24.33■■□□□ 1.49
PPFIA3-213ENST00000602905 NCOA1Q15788 1441 aa24.33■■□□□ 1.49
PPFIA3-213ENST00000602905 CNTLNQ9NXG0 1405 aa24.32■■□□□ 1.48
PPFIA3-213ENST00000602905 ERBINQ96RT1 1412 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms