RNA–Protein interactions for RNA: ENST00000602887.1

RANBP10-208, Transcript of RAN binding protein 10, human

TSL 3

Gene RANBP10, Length 683 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RANBP10-208	ENST00000602887	ARHGEF40	Q8TER5	1519 aa		41.4	■■■■■ 4.22
RANBP10-208	ENST00000602887	POGZ	Q7Z3K3	1410 aa		41.4	■■■■■ 4.22
RANBP10-208	ENST00000602887	MAGI2	Q86UL8	1455 aa		41.39	■■■■■ 4.22
RANBP10-208	ENST00000602887	LOC105371045	A0A1W2PR82	267 aa		41.34	■■■■■ 4.21
RANBP10-208	ENST00000602887	PREX2	Q70Z35	1606 aa		41.33	■■■■■ 4.21
RANBP10-208	ENST00000602887	CDC42BPB	Q9Y5S2	1711 aa		41.32	■■■■■ 4.21
RANBP10-208	ENST00000602887	ZFYVE16	Q7Z3T8	1539 aa		41.31	■■■■■ 4.2
RANBP10-208	ENST00000602887	ARID4B	Q4LE39	1312 aa	Predicted RBP	41.26	■■■■■ 4.2
RANBP10-208	ENST00000602887	ZNF518A	Q6AHZ1	1483 aa		41.26	■■■■■ 4.2
RANBP10-208	ENST00000602887	YEATS2	Q9ULM3	1422 aa		41.25	■■■■■ 4.19
RANBP10-208	ENST00000602887	MTUS2	Q5JR59	1369 aa		41.25	■■■■■ 4.19
RANBP10-208	ENST00000602887	CDC42BPA	Q5VT25	1732 aa		41.23	■■■■■ 4.19
RANBP10-208	ENST00000602887	ADAMTSL3	P82987	1691 aa		41.21	■■■■■ 4.19
RANBP10-208	ENST00000602887	BCORL1	Q5H9F3	1711 aa		41.19	■■■■■ 4.18
RANBP10-208	ENST00000602887	KDM5C	P41229	1560 aa		41.17	■■■■■ 4.18
RANBP10-208	ENST00000602887	GPATCH8	Q9UKJ3	1502 aa	Known RBP	41.17	■■■■■ 4.18
RANBP10-208	ENST00000602887	ABCC1	P33527	1531 aa		41.16	■■■■■ 4.18
RANBP10-208	ENST00000602887	AFAP1	Q8N556	730 aa		41.15	■■■■■ 4.18
RANBP10-208	ENST00000602887	EHBP1L1	Q8N3D4	1523 aa		41.13	■■■■■ 4.18
RANBP10-208	ENST00000602887	ATP10A	O60312	1499 aa		41.12	■■■■■ 4.17
RANBP10-208	ENST00000602887	CCNB3	Q8WWL7	1395 aa		41.11	■■■■■ 4.17
RANBP10-208	ENST00000602887	VPS8	Q8N3P4	1428 aa		41.1	■■■■■ 4.17
RANBP10-208	ENST00000602887	ARHGEF12	Q9NZN5	1544 aa		41.08	■■■■■ 4.17
RANBP10-208	ENST00000602887	ITSN2	Q9NZM3	1697 aa		41.07	■■■■■ 4.17
RANBP10-208	ENST00000602887	C9orf84	Q5VXU9	1444 aa		41.07	■■■■■ 4.16
RANBP10-208	ENST00000602887	HECW2	Q9P2P5	1572 aa		41.07	■■■■■ 4.16
RANBP10-208	ENST00000602887	TRAPPC8	Q9Y2L5	1435 aa		41.06	■■■■■ 4.16
RANBP10-208	ENST00000602887	PTPRM	P28827	1452 aa		41.06	■■■■■ 4.16
RANBP10-208	ENST00000602887	MLH3	Q9UHC1	1453 aa		41.05	■■■■■ 4.16
RANBP10-208	ENST00000602887	CFDP1	Q9UEE9	299 aa	Predicted RBP	41.05	■■■■■ 4.16
RANBP10-208	ENST00000602887	ZNF777	Q9ULD5	760 aa	Predicted RBP	41.04	■■■■■ 4.16
RANBP10-208	ENST00000602887	MADD	Q8WXG6	1647 aa		41.04	■■■■■ 4.16
RANBP10-208	ENST00000602887	MYT1L	Q9UL68	1186 aa		41.02	■■■■■ 4.16
RANBP10-208	ENST00000602887	SAMD9L	Q8IVG5	1584 aa		41.02	■■■■■ 4.16
RANBP10-208	ENST00000602887	SIGLEC1	Q9BZZ2	1709 aa		41.01	■■■■■ 4.16
RANBP10-208	ENST00000602887	PLEKHH2	Q8IVE3	1493 aa		41	■■■■■ 4.15
RANBP10-208	ENST00000602887	KIAA1107	Q9UPP5	1409 aa		40.98	■■■■■ 4.15
RANBP10-208	ENST00000602887	TIAM1	Q13009	1591 aa		40.97	■■■■■ 4.15
RANBP10-208	ENST00000602887	DIP2C	Q9Y2E4	1556 aa		40.94	■■■■■ 4.14
RANBP10-208	ENST00000602887	SYCP2	Q9BX26	1530 aa		40.93	■■■■■ 4.14
RANBP10-208	ENST00000602887	RERE	Q9P2R6	1566 aa		40.92	■■■■■ 4.14
RANBP10-208	ENST00000602887	RIMS1	Q86UR5	1692 aa	Known RBP	40.89	■■■■■ 4.14
RANBP10-208	ENST00000602887	MLEC	Q14165	292 aa		40.89	■■■■■ 4.14
RANBP10-208	ENST00000602887	SUPT6H	Q7KZ85	1726 aa	Known RBP	40.89	■■■■■ 4.14
RANBP10-208	ENST00000602887	HNRNPM	P52272	730 aa	Known RBP eCLIP	40.88	■■■■■ 4.13	6e-7	■■■■■ 83
RANBP10-208	ENST00000602887	ABCA6	Q8N139	1617 aa		40.88	■■■■■ 4.13
RANBP10-208	ENST00000602887	NCOA2	Q15596	1464 aa		40.86	■■■■■ 4.13
RANBP10-208	ENST00000602887	MAP3K1	Q13233	1512 aa		40.86	■■■■■ 4.13
RANBP10-208	ENST00000602887	KIDINS220	Q9ULH0	1771 aa		40.86	■■■■■ 4.13
RANBP10-208	ENST00000602887	SPAG9	O60271	1321 aa	Known RBP	40.83	■■■■■ 4.13
RANBP10-208	ENST00000602887	LRRC9	Q6ZRR7	1453 aa		40.82	■■■■■ 4.12
RANBP10-208	ENST00000602887	FER1L4	A9Z1Z3	1794 aa		40.8	■■■■■ 4.12
RANBP10-208	ENST00000602887	AGL	P35573	1532 aa		40.79	■■■■■ 4.12
RANBP10-208	ENST00000602887	ZNF644	Q9H582	1327 aa	Predicted RBP	40.76	■■■■■ 4.12
RANBP10-208	ENST00000602887	ATP7A	Q04656	1500 aa		40.72	■■■■■ 4.11
RANBP10-208	ENST00000602887	MBD5	Q9P267	1494 aa		40.71	■■■■■ 4.11
RANBP10-208	ENST00000602887	INO80	Q9ULG1	1556 aa	Predicted RBP	40.69	■■■■■ 4.11
RANBP10-208	ENST00000602887	KANK4	Q5T7N3	995 aa	Predicted RBP	40.65	■■■■■ 4.1
RANBP10-208	ENST00000602887	CAMSAP2	Q08AD1	1489 aa		40.64	■■■■■ 4.1
RANBP10-208	ENST00000602887	APLP2	Q06481	763 aa		40.63	■■■■■ 4.09
RANBP10-208	ENST00000602887	RSPH4A	Q5TD94	716 aa		40.63	■■■■■ 4.09
RANBP10-208	ENST00000602887	PLPPR3	Q6T4P5	718 aa		40.61	■■■■■ 4.09
RANBP10-208	ENST00000602887	RTEL1-TNFRSF6B	F6WH68	1400 aa		40.59	■■■■■ 4.09
RANBP10-208	ENST00000602887	A2M	P01023	1474 aa		40.58	■■■■■ 4.09
RANBP10-208	ENST00000602887	CCDC141	Q6ZP82	1450 aa		40.58	■■■■■ 4.09
RANBP10-208	ENST00000602887	LMTK3	Q96Q04	1460 aa		40.58	■■■■■ 4.09
RANBP10-208	ENST00000602887	ESF1	Q9H501	851 aa	Known RBP	40.55	■■■■■ 4.08
RANBP10-208	ENST00000602887	PLXNC1	O60486	1568 aa		40.55	■■■■■ 4.08
RANBP10-208	ENST00000602887	ADGB	Q8N7X0	1667 aa		40.52	■■■■■ 4.08
RANBP10-208	ENST00000602887	MIA2	Q96PC5	1412 aa		40.5	■■■■■ 4.07
RANBP10-208	ENST00000602887	CNTLN	Q9NXG0	1405 aa		40.5	■■■■■ 4.07
RANBP10-208	ENST00000602887	ARHGEF5	Q12774	1597 aa		40.5	■■■■■ 4.07
RANBP10-208	ENST00000602887	MYOM3	Q5VTT5	1437 aa		40.5	■■■■■ 4.07
RANBP10-208	ENST00000602887	CEBPA	P49715	358 aa	Predicted RBP	40.48	■■■■■ 4.07
RANBP10-208	ENST00000602887	SETD1B	Q9UPS6	1966 aa	Known RBP	40.43	■■■■■ 4.06
RANBP10-208	ENST00000602887	TSPY4	P0CV99	314 aa		40.41	■■■■■ 4.06
RANBP10-208	ENST00000602887	TSPY10	P0CW01	314 aa		40.41	■■■■■ 4.06
RANBP10-208	ENST00000602887	DHX29	Q7Z478	1369 aa	Known RBP	40.4	■■■■■ 4.06
RANBP10-208	ENST00000602887	C3	P01024	1663 aa		40.39	■■■■■ 4.06
RANBP10-208	ENST00000602887	PREX1	Q8TCU6	1659 aa		40.37	■■■■■ 4.05
RANBP10-208	ENST00000602887	PPP6R1	Q9UPN7	881 aa		40.36	■■■■■ 4.05
RANBP10-208	ENST00000602887	MROH2A	A6NES4	1674 aa		40.34	■■■■■ 4.05
RANBP10-208	ENST00000602887	HSPA2	P54652	639 aa		40.32	■■■■■ 4.05
RANBP10-208	ENST00000602887	GGT6	Q6P531	493 aa		40.32	■■■■■ 4.05
RANBP10-208	ENST00000602887	UHRF1BP1	Q6BDS2	1440 aa		40.29	■■■■■ 4.04
RANBP10-208	ENST00000602887	MAST1	Q9Y2H9	1570 aa		40.29	■■■■■ 4.04
RANBP10-208	ENST00000602887	ZMYM3	Q14202	1370 aa		40.28	■■■■■ 4.04
RANBP10-208	ENST00000602887	CLTC	Q00610	1675 aa	Known RBP	40.23	■■■■■ 4.03
RANBP10-208	ENST00000602887	NPAT	Q14207	1427 aa		40.23	■■■■■ 4.03
RANBP10-208	ENST00000602887	KIF3B	O15066	747 aa		40.22	■■■■■ 4.03
RANBP10-208	ENST00000602887	PTPN23	Q9H3S7	1636 aa		40.2	■■■■■ 4.03
RANBP10-208	ENST00000602887	FGD6	Q6ZV73	1430 aa		40.2	■■■■■ 4.03
RANBP10-208	ENST00000602887	FAM135A	Q9P2D6	1515 aa		40.16	■■■■■ 4.02
RANBP10-208	ENST00000602887	TCOF1	Q13428	1488 aa	Known RBP	40.15	■■■■■ 4.02
RANBP10-208	ENST00000602887	SHANK2	Q9UPX8	1470 aa		40.12	■■■■■ 4.01
RANBP10-208	ENST00000602887	ABCC5	O15440	1437 aa		40.1	■■■■■ 4.01
RANBP10-208	ENST00000602887	PTPRK	Q15262	1439 aa		40.08	■■■■■ 4.01
RANBP10-208	ENST00000602887	KDM5D	Q9BY66	1539 aa		40.06	■■■■■ 4
RANBP10-208	ENST00000602887	CROCC2	H7BZ55	1655 aa		40.06	■■■■■ 4
RANBP10-208	ENST00000602887	DAPK1	P53355	1430 aa		40.05	■■■■■ 4

Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms