RNA–Protein interactions for RNA: ENST00000602878.5

LINC00472-206, long intergenic non-protein coding RNA 472, humanhuman

TSL 2

Gene LINC00472, Length 717 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00472-206ENST00000602878 CDC42BPBQ9Y5S2 1711 aa18.71■□□□□ 0.59
LINC00472-206ENST00000602878 PREX2Q70Z35 1606 aa18.67■□□□□ 0.58
LINC00472-206ENST00000602878 CDC42BPAQ5VT25 1732 aa18.67■□□□□ 0.58
LINC00472-206ENST00000602878 POGZQ7Z3K3 1410 aa18.66■□□□□ 0.58
LINC00472-206ENST00000602878 ZMYM4Q5VZL5 1548 aa18.66■□□□□ 0.58
LINC00472-206ENST00000602878 ARHGEF40Q8TER5 1519 aa18.66■□□□□ 0.58
LINC00472-206ENST00000602878 ARID4BQ4LE39 1312 aaPredicted RBP18.65■□□□□ 0.58
LINC00472-206ENST00000602878 MTUS2Q5JR59 1369 aa18.64■□□□□ 0.57
LINC00472-206ENST00000602878 MAGI2Q86UL8 1455 aa18.64■□□□□ 0.57
LINC00472-206ENST00000602878 ZFYVE16Q7Z3T8 1539 aa18.64■□□□□ 0.57
LINC00472-206ENST00000602878 YEATS2Q9ULM3 1422 aa18.63■□□□□ 0.57
LINC00472-206ENST00000602878 AFAP1Q8N556 730 aa18.61■□□□□ 0.57
LINC00472-206ENST00000602878 BCORL1Q5H9F3 1711 aa18.6■□□□□ 0.57
LINC00472-206ENST00000602878 ZNF518AQ6AHZ1 1483 aa18.6■□□□□ 0.57
LINC00472-206ENST00000602878 ADAMTSL3P82987 1691 aa18.6■□□□□ 0.57
LINC00472-206ENST00000602878 ZNF777Q9ULD5 760 aaPredicted RBP18.59■□□□□ 0.57
LINC00472-206ENST00000602878 GPATCH8Q9UKJ3 1502 aaKnown RBP18.59■□□□□ 0.57
LINC00472-206ENST00000602878 ABCC1P33527 1531 aa18.58■□□□□ 0.56
LINC00472-206ENST00000602878 MYT1LQ9UL68 1186 aa18.57■□□□□ 0.56
LINC00472-206ENST00000602878 EHBP1L1Q8N3D4 1523 aa18.57■□□□□ 0.56
LINC00472-206ENST00000602878 SIGLEC1Q9BZZ2 1709 aa18.57■□□□□ 0.56
LINC00472-206ENST00000602878 VPS8Q8N3P4 1428 aa18.57■□□□□ 0.56
LINC00472-206ENST00000602878 ITSN2Q9NZM3 1697 aa18.57■□□□□ 0.56
LINC00472-206ENST00000602878 CCNB3Q8WWL7 1395 aa18.56■□□□□ 0.56
LINC00472-206ENST00000602878 KDM5CP41229 1560 aa18.56■□□□□ 0.56
LINC00472-206ENST00000602878 ARHGEF12Q9NZN5 1544 aa18.56■□□□□ 0.56
LINC00472-206ENST00000602878 CFDP1Q9UEE9 299 aaPredicted RBP18.55■□□□□ 0.56
LINC00472-206ENST00000602878 TRAPPC8Q9Y2L5 1435 aa18.55■□□□□ 0.56
LINC00472-206ENST00000602878 ATP10AO60312 1499 aa18.54■□□□□ 0.56
LINC00472-206ENST00000602878 MADDQ8WXG6 1647 aa18.54■□□□□ 0.56
LINC00472-206ENST00000602878 SAMD9LQ8IVG5 1584 aa18.54■□□□□ 0.56
LINC00472-206ENST00000602878 HECW2Q9P2P5 1572 aa18.54■□□□□ 0.56
LINC00472-206ENST00000602878 TIAM1Q13009 1591 aa18.52■□□□□ 0.56
LINC00472-206ENST00000602878 PTPRMP28827 1452 aa18.52■□□□□ 0.55
LINC00472-206ENST00000602878 C9orf84Q5VXU9 1444 aa18.51■□□□□ 0.55
LINC00472-206ENST00000602878 MLECQ14165 292 aa18.51■□□□□ 0.55
LINC00472-206ENST00000602878 MLH3Q9UHC1 1453 aa18.51■□□□□ 0.55
LINC00472-206ENST00000602878 SYCP2Q9BX26 1530 aa18.5■□□□□ 0.55
LINC00472-206ENST00000602878 HNRNPMP52272 730 aaKnown RBP eCLIP18.5■□□□□ 0.55
LINC00472-206ENST00000602878 RIMS1Q86UR5 1692 aaKnown RBP18.5■□□□□ 0.55
LINC00472-206ENST00000602878 SUPT6HQ7KZ85 1726 aaKnown RBP18.49■□□□□ 0.55
LINC00472-206ENST00000602878 DIP2CQ9Y2E4 1556 aa18.48■□□□□ 0.55
LINC00472-206ENST00000602878 KIDINS220Q9ULH0 1771 aa18.47■□□□□ 0.55
LINC00472-206ENST00000602878 ABCA6Q8N139 1617 aa18.47■□□□□ 0.55
LINC00472-206ENST00000602878 NCOA2Q15596 1464 aa18.46■□□□□ 0.55
LINC00472-206ENST00000602878 PLEKHH2Q8IVE3 1493 aa18.46■□□□□ 0.55
LINC00472-206ENST00000602878 KIAA1107Q9UPP5 1409 aa18.46■□□□□ 0.55
LINC00472-206ENST00000602878 FER1L4A9Z1Z3 1794 aa18.45■□□□□ 0.54
LINC00472-206ENST00000602878 ZNF644Q9H582 1327 aaPredicted RBP18.45■□□□□ 0.54
LINC00472-206ENST00000602878 LRRC9Q6ZRR7 1453 aa18.45■□□□□ 0.54
LINC00472-206ENST00000602878 PLPPR3Q6T4P5 718 aa18.43■□□□□ 0.54
LINC00472-206ENST00000602878 SPAG9O60271 1321 aaKnown RBP18.43■□□□□ 0.54
LINC00472-206ENST00000602878 REREQ9P2R6 1566 aa18.42■□□□□ 0.54
LINC00472-206ENST00000602878 MAP3K1Q13233 1512 aa18.42■□□□□ 0.54
LINC00472-206ENST00000602878 KANK4Q5T7N3 995 aaPredicted RBP18.41■□□□□ 0.54
LINC00472-206ENST00000602878 ATP7AQ04656 1500 aa18.39■□□□□ 0.53
LINC00472-206ENST00000602878 APLP2Q06481 763 aa18.38■□□□□ 0.53
LINC00472-206ENST00000602878 MBD5Q9P267 1494 aa18.38■□□□□ 0.53
LINC00472-206ENST00000602878 AGLP35573 1532 aa18.37■□□□□ 0.53
LINC00472-206ENST00000602878 INO80Q9ULG1 1556 aaPredicted RBP18.37■□□□□ 0.53
LINC00472-206ENST00000602878 CAMSAP2Q08AD1 1489 aa18.36■□□□□ 0.53
LINC00472-206ENST00000602878 CEBPAP49715 358 aaPredicted RBP18.31■□□□□ 0.52
LINC00472-206ENST00000602878 RSPH4AQ5TD94 716 aa18.31■□□□□ 0.52
LINC00472-206ENST00000602878 ESF1Q9H501 851 aaKnown RBP18.31■□□□□ 0.52
LINC00472-206ENST00000602878 A2MP01023 1474 aa18.31■□□□□ 0.52
LINC00472-206ENST00000602878 CCDC141Q6ZP82 1450 aa18.31■□□□□ 0.52
LINC00472-206ENST00000602878 ADGBQ8N7X0 1667 aa18.31■□□□□ 0.52
LINC00472-206ENST00000602878 RTEL1-TNFRSF6BF6WH68 1400 aa18.3■□□□□ 0.52
LINC00472-206ENST00000602878 LMTK3Q96Q04 1460 aa18.29■□□□□ 0.52
LINC00472-206ENST00000602878 MYOM3Q5VTT5 1437 aa18.29■□□□□ 0.52
LINC00472-206ENST00000602878 PLXNC1O60486 1568 aa18.29■□□□□ 0.52
LINC00472-206ENST00000602878 SETD1BQ9UPS6 1966 aaKnown RBP18.28■□□□□ 0.52
LINC00472-206ENST00000602878 ARHGEF5Q12774 1597 aa18.27■□□□□ 0.52
LINC00472-206ENST00000602878 MIA2Q96PC5 1412 aa18.26■□□□□ 0.51
LINC00472-206ENST00000602878 C3P01024 1663 aa18.26■□□□□ 0.51
LINC00472-206ENST00000602878 TSPY4P0CV99 314 aa18.26■□□□□ 0.51
LINC00472-206ENST00000602878 TSPY10P0CW01 314 aa18.26■□□□□ 0.51
LINC00472-206ENST00000602878 GGT6Q6P531 493 aa18.24■□□□□ 0.51
LINC00472-206ENST00000602878 CNTLNQ9NXG0 1405 aa18.23■□□□□ 0.51
LINC00472-206ENST00000602878 PREX1Q8TCU6 1659 aa18.23■□□□□ 0.51
LINC00472-206ENST00000602878 DHX29Q7Z478 1369 aaKnown RBP18.23■□□□□ 0.51
LINC00472-206ENST00000602878 HSPA2P54652 639 aa18.23■□□□□ 0.51
LINC00472-206ENST00000602878 CLTCQ00610 1675 aaKnown RBP18.21■□□□□ 0.51
LINC00472-206ENST00000602878 MROH2AA6NES4 1674 aa18.2■□□□□ 0.5
LINC00472-206ENST00000602878 PTPN23Q9H3S7 1636 aa18.19■□□□□ 0.5
LINC00472-206ENST00000602878 ZMYM3Q14202 1370 aa18.18■□□□□ 0.5
LINC00472-206ENST00000602878 KIF3BO15066 747 aa18.18■□□□□ 0.5
LINC00472-206ENST00000602878 MAST1Q9Y2H9 1570 aa18.17■□□□□ 0.5
LINC00472-206ENST00000602878 UHRF1BP1Q6BDS2 1440 aa18.16■□□□□ 0.5
LINC00472-206ENST00000602878 PPP6R1Q9UPN7 881 aa18.16■□□□□ 0.5
LINC00472-206ENST00000602878 FGD6Q6ZV73 1430 aa18.15■□□□□ 0.5
LINC00472-206ENST00000602878 ABCC5O15440 1437 aa18.12■□□□□ 0.49
LINC00472-206ENST00000602878 TCOF1Q13428 1488 aaKnown RBP18.12■□□□□ 0.49
LINC00472-206ENST00000602878 CROCC2H7BZ55 1655 aa18.12■□□□□ 0.49
LINC00472-206ENST00000602878 NPATQ14207 1427 aa18.11■□□□□ 0.49
LINC00472-206ENST00000602878 DNMT1P26358 1616 aaKnown RBP18.09■□□□□ 0.49
LINC00472-206ENST00000602878 DAPK1P53355 1430 aa18.09■□□□□ 0.49
LINC00472-206ENST00000602878 SHANK2Q9UPX8 1470 aa18.08■□□□□ 0.49
LINC00472-206ENST00000602878 PTPRKQ15262 1439 aa18.08■□□□□ 0.49
LINC00472-206ENST00000602878 WASHC2CQ9Y4E1 1318 aa18.08■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms