RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 ZFYVE16Q7Z3T8 1539 aa34.55■■■■□ 3.12
PPFIA3-209ENST00000602783 MAGI2Q86UL8 1455 aa34.55■■■■□ 3.12
PPFIA3-209ENST00000602783 MYO5CQ9NQX4 1742 aa34.55■■■■□ 3.12
PPFIA3-209ENST00000602783 MADDQ8WXG6 1647 aa34.55■■■■□ 3.12
PPFIA3-209ENST00000602783 POGZQ7Z3K3 1410 aa34.54■■■■□ 3.12
PPFIA3-209ENST00000602783 CASKIN1Q8WXD9 1431 aa34.5■■■■□ 3.11
PPFIA3-209ENST00000602783 ILDR1Q86SU0 546 aaPredicted RBP34.49■■■■□ 3.11
PPFIA3-209ENST00000602783 PCF11O94913 1555 aaKnown RBP34.48■■■■□ 3.11
PPFIA3-209ENST00000602783 ARHGAP5Q13017 1502 aa34.46■■■■□ 3.11
PPFIA3-209ENST00000602783 MLECQ14165 292 aa34.45■■■■□ 3.11
PPFIA3-209ENST00000602783 CCDC18Q5T9S5 1454 aa34.44■■■■□ 3.1
PPFIA3-209ENST00000602783 RIMS1Q86UR5 1692 aaKnown RBP34.43■■■■□ 3.1
PPFIA3-209ENST00000602783 SIGLEC1Q9BZZ2 1709 aa34.41■■■■□ 3.1
PPFIA3-209ENST00000602783 PLPPR3Q6T4P5 718 aa34.41■■■■□ 3.1
PPFIA3-209ENST00000602783 AFAP1Q8N556 730 aa34.41■■■■□ 3.1
PPFIA3-209ENST00000602783 ATP10AO60312 1499 aa34.39■■■■□ 3.1
PPFIA3-209ENST00000602783 ZNF518AQ6AHZ1 1483 aa34.37■■■■□ 3.09
PPFIA3-209ENST00000602783 MYT1LQ9UL68 1186 aa34.36■■■■□ 3.09
PPFIA3-209ENST00000602783 FYCO1Q9BQS8 1478 aa34.34■■■■□ 3.09
PPFIA3-209ENST00000602783 CDC42BPBQ9Y5S2 1711 aa34.33■■■■□ 3.09
PPFIA3-209ENST00000602783 C9orf84Q5VXU9 1444 aa34.33■■■■□ 3.09
PPFIA3-209ENST00000602783 LMTK3Q96Q04 1460 aa34.29■■■■□ 3.08
PPFIA3-209ENST00000602783 KDM5CP41229 1560 aa34.28■■■■□ 3.08
PPFIA3-209ENST00000602783 PREX2Q70Z35 1606 aa34.26■■■■□ 3.08
PPFIA3-209ENST00000602783 FER1L4A9Z1Z3 1794 aa34.23■■■■□ 3.07
PPFIA3-209ENST00000602783 ARHGEF12Q9NZN5 1544 aa34.23■■■■□ 3.07
PPFIA3-209ENST00000602783 TRAPPC8Q9Y2L5 1435 aa34.22■■■■□ 3.07
PPFIA3-209ENST00000602783 HSPA2P54652 639 aa34.2■■■■□ 3.07
PPFIA3-209ENST00000602783 ZNF777Q9ULD5 760 aaPredicted RBP34.2■■■■□ 3.07
PPFIA3-209ENST00000602783 ABCC1P33527 1531 aa34.2■■■■□ 3.06
PPFIA3-209ENST00000602783 MLH3Q9UHC1 1453 aa34.19■■■■□ 3.06
PPFIA3-209ENST00000602783 CDC42BPAQ5VT25 1732 aa34.18■■■■□ 3.06
PPFIA3-209ENST00000602783 DIP2CQ9Y2E4 1556 aa34.16■■■■□ 3.06
PPFIA3-209ENST00000602783 CEBPAP49715 358 aaPredicted RBP34.14■■■■□ 3.06
PPFIA3-209ENST00000602783 ITSN2Q9NZM3 1697 aa34.13■■■■□ 3.05
PPFIA3-209ENST00000602783 GPATCH8Q9UKJ3 1502 aaKnown RBP34.12■■■■□ 3.05
PPFIA3-209ENST00000602783 ABCA6Q8N139 1617 aa34.11■■■■□ 3.05
PPFIA3-209ENST00000602783 CEP162Q5TB80 1403 aa34.09■■■■□ 3.05
PPFIA3-209ENST00000602783 REREQ9P2R6 1566 aa34.08■■■■□ 3.05
PPFIA3-209ENST00000602783 MTUS2Q5JR59 1369 aa34.08■■■■□ 3.05
PPFIA3-209ENST00000602783 HNRNPMP52272 730 aaKnown RBP eCLIP34.07■■■■□ 3.04
PPFIA3-209ENST00000602783 CFDP1Q9UEE9 299 aaPredicted RBP34.06■■■■□ 3.04
PPFIA3-209ENST00000602783 CCNB3Q8WWL7 1395 aa34.05■■■■□ 3.04
PPFIA3-209ENST00000602783 SAMD9LQ8IVG5 1584 aa34.04■■■■□ 3.04
PPFIA3-209ENST00000602783 KIDINS220Q9ULH0 1771 aa34.03■■■■□ 3.04
PPFIA3-209ENST00000602783 AGLP35573 1532 aa34.01■■■■□ 3.04
PPFIA3-209ENST00000602783 SYCP2Q9BX26 1530 aa34.01■■■■□ 3.04
PPFIA3-209ENST00000602783 FBXO41Q8TF61 875 aa34.01■■■■□ 3.03
PPFIA3-209ENST00000602783 ESF1Q9H501 851 aaKnown RBP34.01■■■■□ 3.03
PPFIA3-209ENST00000602783 SPAG9O60271 1321 aaKnown RBP34.01■■■■□ 3.03
PPFIA3-209ENST00000602783 KIAA1107Q9UPP5 1409 aa33.96■■■■□ 3.03
PPFIA3-209ENST00000602783 PLEKHH2Q8IVE3 1493 aa33.95■■■■□ 3.02
PPFIA3-209ENST00000602783 PREX1Q8TCU6 1659 aa33.93■■■■□ 3.02
PPFIA3-209ENST00000602783 SETD1BQ9UPS6 1966 aaKnown RBP33.91■■■■□ 3.02
PPFIA3-209ENST00000602783 UHRF1BP1Q6BDS2 1440 aa33.88■■■■□ 3.01
PPFIA3-209ENST00000602783 ZNF644Q9H582 1327 aaPredicted RBP33.88■■■■□ 3.01
PPFIA3-209ENST00000602783 EHBP1L1Q8N3D4 1523 aa33.88■■■■□ 3.01
PPFIA3-209ENST00000602783 ATP7AQ04656 1500 aa33.85■■■■□ 3.01
PPFIA3-209ENST00000602783 C3P01024 1663 aa33.85■■■■□ 3.01
PPFIA3-209ENST00000602783 CNTLNQ9NXG0 1405 aa33.84■■■■□ 3.01
PPFIA3-209ENST00000602783 TIAM1Q13009 1591 aa33.84■■■■□ 3.01
PPFIA3-209ENST00000602783 LOC105371045A0A1W2PR82 267 aa33.83■■■■□ 3.01
PPFIA3-209ENST00000602783 SUPT6HQ7KZ85 1726 aaKnown RBP33.8■■■■□ 3
PPFIA3-209ENST00000602783 INO80Q9ULG1 1556 aaPredicted RBP33.79■■■■□ 3
PPFIA3-209ENST00000602783 A2MP01023 1474 aa33.78■■■■□ 3
PPFIA3-209ENST00000602783 DMRT2Q9Y5R5 561 aa33.76■■■□□ 2.99
PPFIA3-209ENST00000602783 MBD5Q9P267 1494 aa33.75■■■□□ 2.99
PPFIA3-209ENST00000602783 GGT6Q6P531 493 aa33.74■■■□□ 2.99
PPFIA3-209ENST00000602783 CERKQ8TCT0 537 aa33.74■■■□□ 2.99
PPFIA3-209ENST00000602783 ZMYM3Q14202 1370 aa33.73■■■□□ 2.99
PPFIA3-209ENST00000602783 NCOA2Q15596 1464 aa33.72■■■□□ 2.99
PPFIA3-209ENST00000602783 PLXNC1O60486 1568 aa33.72■■■□□ 2.99
PPFIA3-209ENST00000602783 STRCQ7RTU9 1775 aa33.71■■■□□ 2.99
PPFIA3-209ENST00000602783 VPS8Q8N3P4 1428 aa33.7■■■□□ 2.99
PPFIA3-209ENST00000602783 RTEL1-TNFRSF6BF6WH68 1400 aa33.67■■■□□ 2.98
PPFIA3-209ENST00000602783 MROH2AA6NES4 1674 aa33.67■■■□□ 2.98
PPFIA3-209ENST00000602783 NPATQ14207 1427 aa33.65■■■□□ 2.98
PPFIA3-209ENST00000602783 ADGBQ8N7X0 1667 aa33.64■■■□□ 2.98
PPFIA3-209ENST00000602783 CLTCQ00610 1675 aaKnown RBP33.62■■■□□ 2.97
PPFIA3-209ENST00000602783 RSPH4AQ5TD94 716 aa33.62■■■□□ 2.97
PPFIA3-209ENST00000602783 PPP6R1Q9UPN7 881 aa33.62■■■□□ 2.97
PPFIA3-209ENST00000602783 CAMSAP2Q08AD1 1489 aa33.61■■■□□ 2.97
PPFIA3-209ENST00000602783 DHX29Q7Z478 1369 aaKnown RBP33.6■■■□□ 2.97
PPFIA3-209ENST00000602783 CCDC141Q6ZP82 1450 aa33.59■■■□□ 2.97
PPFIA3-209ENST00000602783 PTPRTO14522 1441 aa33.57■■■□□ 2.96
PPFIA3-209ENST00000602783 LRRC9Q6ZRR7 1453 aa33.56■■■□□ 2.96
PPFIA3-209ENST00000602783 KIF3BO15066 747 aa33.54■■■□□ 2.96
PPFIA3-209ENST00000602783 PTPRKQ15262 1439 aa33.53■■■□□ 2.96
PPFIA3-209ENST00000602783 NCOA1Q15788 1441 aa33.53■■■□□ 2.96
PPFIA3-209ENST00000602783 TSPY4P0CV99 314 aa33.52■■■□□ 2.96
PPFIA3-209ENST00000602783 TSPY10P0CW01 314 aa33.52■■■□□ 2.96
PPFIA3-209ENST00000602783 KANK4Q5T7N3 995 aaPredicted RBP33.52■■■□□ 2.96
PPFIA3-209ENST00000602783 CAMSAP1Q5T5Y3 1602 aa33.49■■■□□ 2.95
PPFIA3-209ENST00000602783 MAP3K1Q13233 1512 aa33.48■■■□□ 2.95
PPFIA3-209ENST00000602783 ARHGEF5Q12774 1597 aa33.45■■■□□ 2.95
PPFIA3-209ENST00000602783 NCKAP5LQ9HCH0 1330 aa33.45■■■□□ 2.95
PPFIA3-209ENST00000602783 MYO3AQ8NEV4 1616 aa33.42■■■□□ 2.94
PPFIA3-209ENST00000602783 WASHC2CQ9Y4E1 1318 aa33.4■■■□□ 2.94
PPFIA3-209ENST00000602783 CEP170BQ9Y4F5 1589 aaPredicted RBP33.38■■■□□ 2.93
PPFIA3-209ENST00000602783 FBXO31Q5XUX0 539 aaPredicted RBP33.38■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms