RNA–Protein interactions for RNA: ENST00000602728.1

SPCS1-205, Transcript of signal peptidase complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPCS1, Length 832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1-205ENST00000602728 KCNH8Q96L42 1107 aa16.5■□□□□ 0.23
SPCS1-205ENST00000602728 TTC37Q6PGP7 1564 aa16.5■□□□□ 0.23
SPCS1-205ENST00000602728 HECW1Q76N89 1606 aa16.49■□□□□ 0.23
SPCS1-205ENST00000602728 FOXD4L1Q9NU39 408 aa16.46■□□□□ 0.23
SPCS1-205ENST00000602728 PCF11O94913 1555 aaKnown RBP16.46■□□□□ 0.23
SPCS1-205ENST00000602728 FRMPD1Q5SYB0 1578 aa16.46■□□□□ 0.23
SPCS1-205ENST00000602728 UBTFP17480 764 aaKnown RBP16.44■□□□□ 0.22
SPCS1-205ENST00000602728 ADGRL1O94910 1474 aa16.42■□□□□ 0.22
SPCS1-205ENST00000602728 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.42■□□□□ 0.222e-6■□□□□ 11.3
SPCS1-205ENST00000602728 KIF14Q15058 1648 aa16.41■□□□□ 0.22
SPCS1-205ENST00000602728 RICTORQ6R327 1708 aa16.39■□□□□ 0.21
SPCS1-205ENST00000602728 MYO5CQ9NQX4 1742 aa16.39■□□□□ 0.21
SPCS1-205ENST00000602728 CFAP74Q9C0B2 1584 aa16.39■□□□□ 0.21
SPCS1-205ENST00000602728 KDM4FA0A1W2PPD8 638 aa16.38■□□□□ 0.21
SPCS1-205ENST00000602728 ARAP3Q8WWN8 1544 aa16.38■□□□□ 0.21
SPCS1-205ENST00000602728 FMN1Q68DA7 1419 aa16.37■□□□□ 0.21
SPCS1-205ENST00000602728 POLA2Q14181 598 aa16.37■□□□□ 0.21
SPCS1-205ENST00000602728 NEO1Q92859 1461 aa16.35■□□□□ 0.21
SPCS1-205ENST00000602728 ARHGEF40Q8TER5 1519 aa16.33■□□□□ 0.2
SPCS1-205ENST00000602728 SIGLEC1Q9BZZ2 1709 aa16.31■□□□□ 0.2
SPCS1-205ENST00000602728 FANCAO15360 1455 aa16.3■□□□□ 0.2
SPCS1-205ENST00000602728 POTEHQ6S545 545 aa16.29■□□□□ 0.2
SPCS1-205ENST00000602728 ATP1B4Q9UN42 357 aaPredicted RBP16.29■□□□□ 0.2
SPCS1-205ENST00000602728 CDC42BPBQ9Y5S2 1711 aa16.28■□□□□ 0.2
SPCS1-205ENST00000602728 ATF5Q9Y2D1 282 aaPredicted RBP16.28■□□□□ 0.2
SPCS1-205ENST00000602728 PREX2Q70Z35 1606 aa16.27■□□□□ 0.2
SPCS1-205ENST00000602728 CDC42BPAQ5VT25 1732 aa16.26■□□□□ 0.19
SPCS1-205ENST00000602728 PLEKHD1A6NEE1 506 aa16.26■□□□□ 0.19
SPCS1-205ENST00000602728 FYCO1Q9BQS8 1478 aa16.26■□□□□ 0.19
SPCS1-205ENST00000602728 CLIP1P30622 1438 aa16.26■□□□□ 0.19
SPCS1-205ENST00000602728 CASKIN1Q8WXD9 1431 aa16.26■□□□□ 0.19
SPCS1-205ENST00000602728 BCORL1Q5H9F3 1711 aa16.25■□□□□ 0.19
SPCS1-205ENST00000602728 ZMYM4Q5VZL5 1548 aa16.25■□□□□ 0.19
SPCS1-205ENST00000602728 RAPGEF3O95398 923 aa16.25■□□□□ 0.19
SPCS1-205ENST00000602728 TROQ12816 1431 aaPredicted RBP16.25■□□□□ 0.19
SPCS1-205ENST00000602728 AKNAQ7Z591 1439 aa16.25■□□□□ 0.19
SPCS1-205ENST00000602728 ADAMTSL3P82987 1691 aa16.24■□□□□ 0.19
SPCS1-205ENST00000602728 CCDC18Q5T9S5 1454 aa16.24■□□□□ 0.19
SPCS1-205ENST00000602728 MADDQ8WXG6 1647 aa16.23■□□□□ 0.19
SPCS1-205ENST00000602728 DENND4BO75064 1496 aaPredicted RBP16.22■□□□□ 0.19
SPCS1-205ENST00000602728 ZBTB22O15209 634 aa16.22■□□□□ 0.19
SPCS1-205ENST00000602728 PHLDB1Q86UU1 1377 aa16.22■□□□□ 0.19
SPCS1-205ENST00000602728 ITSN2Q9NZM3 1697 aa16.21■□□□□ 0.19
SPCS1-205ENST00000602728 ARHGAP5Q13017 1502 aa16.21■□□□□ 0.19
SPCS1-205ENST00000602728 ZFYVE16Q7Z3T8 1539 aa16.21■□□□□ 0.19
SPCS1-205ENST00000602728 RIMS1Q86UR5 1692 aaKnown RBP16.21■□□□□ 0.18
SPCS1-205ENST00000602728 RBM42Q9BTD8 480 aaKnown RBP16.2■□□□□ 0.18
SPCS1-205ENST00000602728 HECW2Q9P2P5 1572 aa16.2■□□□□ 0.18
SPCS1-205ENST00000602728 PLCH2O75038 1416 aa16.19■□□□□ 0.18
SPCS1-205ENST00000602728 POGZQ7Z3K3 1410 aa16.19■□□□□ 0.18
SPCS1-205ENST00000602728 YEATS2Q9ULM3 1422 aa16.18■□□□□ 0.18
SPCS1-205ENST00000602728 ABCC1P33527 1531 aa16.17■□□□□ 0.18
SPCS1-205ENST00000602728 CEP162Q5TB80 1403 aa16.16■□□□□ 0.18
SPCS1-205ENST00000602728 FER1L4A9Z1Z3 1794 aa16.15■□□□□ 0.18
SPCS1-205ENST00000602728 KDM5CP41229 1560 aa16.15■□□□□ 0.18
SPCS1-205ENST00000602728 SCAPERQ9BY12 1400 aa16.14■□□□□ 0.17
SPCS1-205ENST00000602728 ABCA6Q8N139 1617 aa16.14■□□□□ 0.17
SPCS1-205ENST00000602728 SAMD9LQ8IVG5 1584 aa16.13■□□□□ 0.17
SPCS1-205ENST00000602728 DIP2CQ9Y2E4 1556 aa16.12■□□□□ 0.17
SPCS1-205ENST00000602728 CDK11AQ9UQ88 783 aaPredicted RBP16.11■□□□□ 0.17
SPCS1-205ENST00000602728 PTPRMP28827 1452 aa16.1■□□□□ 0.17
SPCS1-205ENST00000602728 ARHGEF12Q9NZN5 1544 aa16.09■□□□□ 0.17
SPCS1-205ENST00000602728 TIAM1Q13009 1591 aa16.09■□□□□ 0.17
SPCS1-205ENST00000602728 ZNF518AQ6AHZ1 1483 aa16.09■□□□□ 0.17
SPCS1-205ENST00000602728 SYCP2Q9BX26 1530 aa16.09■□□□□ 0.17
SPCS1-205ENST00000602728 MAGI2Q86UL8 1455 aa16.08■□□□□ 0.16
SPCS1-205ENST00000602728 EHBP1L1Q8N3D4 1523 aa16.08■□□□□ 0.16
SPCS1-205ENST00000602728 KIDINS220Q9ULH0 1771 aa16.08■□□□□ 0.16
SPCS1-205ENST00000602728 ARID4BQ4LE39 1312 aaPredicted RBP16.05■□□□□ 0.16
SPCS1-205ENST00000602728 C9orf84Q5VXU9 1444 aa16.04■□□□□ 0.16
SPCS1-205ENST00000602728 TRAPPC8Q9Y2L5 1435 aa16.04■□□□□ 0.16
SPCS1-205ENST00000602728 EFCAB2Q5VUJ9 269 aa16.04■□□□□ 0.16
SPCS1-205ENST00000602728 GPATCH8Q9UKJ3 1502 aaKnown RBP16.03■□□□□ 0.16
SPCS1-205ENST00000602728 SUPT6HQ7KZ85 1726 aaKnown RBP16.02■□□□□ 0.16
SPCS1-205ENST00000602728 INO80Q9ULG1 1556 aaPredicted RBP16.02■□□□□ 0.16
SPCS1-205ENST00000602728 REREQ9P2R6 1566 aa16.01■□□□□ 0.15
SPCS1-205ENST00000602728 ATP10AO60312 1499 aa16.01■□□□□ 0.15
SPCS1-205ENST00000602728 ZBTB12Q9Y330 459 aaPredicted RBP16■□□□□ 0.15
SPCS1-205ENST00000602728 MTUS2Q5JR59 1369 aa16■□□□□ 0.15
SPCS1-205ENST00000602728 LOC105371045A0A1W2PR82 267 aa15.99■□□□□ 0.15
SPCS1-205ENST00000602728 AFAP1Q8N556 730 aa15.99■□□□□ 0.15
SPCS1-205ENST00000602728 MLH3Q9UHC1 1453 aa15.97■□□□□ 0.15
SPCS1-205ENST00000602728 C3P01024 1663 aa15.96■□□□□ 0.15
SPCS1-205ENST00000602728 ADGBQ8N7X0 1667 aa15.96■□□□□ 0.15
SPCS1-205ENST00000602728 VPS8Q8N3P4 1428 aa15.96■□□□□ 0.15
SPCS1-205ENST00000602728 ATP7AQ04656 1500 aa15.96■□□□□ 0.15
SPCS1-205ENST00000602728 MLECQ14165 292 aa15.96■□□□□ 0.15
SPCS1-205ENST00000602728 LMTK3Q96Q04 1460 aa15.96■□□□□ 0.14
SPCS1-205ENST00000602728 ZNF777Q9ULD5 760 aaPredicted RBP15.94■□□□□ 0.14
SPCS1-205ENST00000602728 CCNB3Q8WWL7 1395 aa15.94■□□□□ 0.14
SPCS1-205ENST00000602728 NCOA2Q15596 1464 aa15.94■□□□□ 0.14
SPCS1-205ENST00000602728 PREX1Q8TCU6 1659 aa15.94■□□□□ 0.14
SPCS1-205ENST00000602728 PLXNC1O60486 1568 aa15.93■□□□□ 0.14
SPCS1-205ENST00000602728 ATXN8OSP0DMR3 200 aa15.92■□□□□ 0.14
SPCS1-205ENST00000602728 AGLP35573 1532 aa15.91■□□□□ 0.14
SPCS1-205ENST00000602728 MYT1LQ9UL68 1186 aa15.91■□□□□ 0.14
SPCS1-205ENST00000602728 CAMSAP2Q08AD1 1489 aa15.9■□□□□ 0.14
SPCS1-205ENST00000602728 PLEKHH2Q8IVE3 1493 aa15.9■□□□□ 0.14
SPCS1-205ENST00000602728 CLTCQ00610 1675 aaKnown RBP15.89■□□□□ 0.13
SPCS1-205ENST00000602728 LRRC9Q6ZRR7 1453 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms