RNA–Protein interactions for RNA: ENST00000602544.5

SFXN2-206, Transcript of sideroflexin 2, humanhuman

TSL 4

Gene SFXN2, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN2-206ENST00000602544 ZNF777Q9ULD5 760 aaPredicted RBP23.28■■□□□ 1.32
SFXN2-206ENST00000602544 CCNB3Q8WWL7 1395 aa23.27■■□□□ 1.31
SFXN2-206ENST00000602544 KDM4FA0A1W2PPD8 638 aa23.25■■□□□ 1.31
SFXN2-206ENST00000602544 CFDP1Q9UEE9 299 aaPredicted RBP23.24■■□□□ 1.31
SFXN2-206ENST00000602544 ARID4BQ4LE39 1312 aaPredicted RBP23.24■■□□□ 1.31
SFXN2-206ENST00000602544 MYO5CQ9NQX4 1742 aa23.22■■□□□ 1.31
SFXN2-206ENST00000602544 POGZQ7Z3K3 1410 aa23.2■■□□□ 1.3
SFXN2-206ENST00000602544 AFAP1Q8N556 730 aa23.19■■□□□ 1.3
SFXN2-206ENST00000602544 EHBP1L1Q8N3D4 1523 aa23.18■■□□□ 1.3
SFXN2-206ENST00000602544 GPATCH8Q9UKJ3 1502 aaKnown RBP23.17■■□□□ 1.3
SFXN2-206ENST00000602544 FRMPD1Q5SYB0 1578 aa23.15■■□□□ 1.3
SFXN2-206ENST00000602544 MAGI2Q86UL8 1455 aa23.15■■□□□ 1.3
SFXN2-206ENST00000602544 ZNF518AQ6AHZ1 1483 aa23.14■■□□□ 1.29
SFXN2-206ENST00000602544 PREX2Q70Z35 1606 aa23.11■■□□□ 1.29
SFXN2-206ENST00000602544 TIAM1Q13009 1591 aa23.11■■□□□ 1.29
SFXN2-206ENST00000602544 HNRNPMP52272 730 aaKnown RBP eCLIP23.11■■□□□ 1.29
SFXN2-206ENST00000602544 ZFYVE16Q7Z3T8 1539 aa23.1■■□□□ 1.29
SFXN2-206ENST00000602544 ZMYM4Q5VZL5 1548 aa23.09■■□□□ 1.29
SFXN2-206ENST00000602544 RICTORQ6R327 1708 aa23.09■■□□□ 1.29
SFXN2-206ENST00000602544 KANK4Q5T7N3 995 aaPredicted RBP23.09■■□□□ 1.29
SFXN2-206ENST00000602544 LRRC9Q6ZRR7 1453 aa23.09■■□□□ 1.29
SFXN2-206ENST00000602544 YEATS2Q9ULM3 1422 aa23.08■■□□□ 1.29
SFXN2-206ENST00000602544 PLEKHH2Q8IVE3 1493 aa23.08■■□□□ 1.29
SFXN2-206ENST00000602544 CDC42BPBQ9Y5S2 1711 aa23.08■■□□□ 1.28
SFXN2-206ENST00000602544 NCOA2Q15596 1464 aa23.07■■□□□ 1.28
SFXN2-206ENST00000602544 ARHGEF40Q8TER5 1519 aa23.07■■□□□ 1.28
SFXN2-206ENST00000602544 TRAPPC8Q9Y2L5 1435 aa23.07■■□□□ 1.28
SFXN2-206ENST00000602544 MAP3K1Q13233 1512 aa23.06■■□□□ 1.28
SFXN2-206ENST00000602544 ABCC1P33527 1531 aa23.05■■□□□ 1.28
SFXN2-206ENST00000602544 SPAG9O60271 1321 aaKnown RBP23.05■■□□□ 1.28
SFXN2-206ENST00000602544 MLECQ14165 292 aa23.04■■□□□ 1.28
SFXN2-206ENST00000602544 KIAA1107Q9UPP5 1409 aa23.04■■□□□ 1.28
SFXN2-206ENST00000602544 CDC42BPAQ5VT25 1732 aa23.04■■□□□ 1.28
SFXN2-206ENST00000602544 ZNF644Q9H582 1327 aaPredicted RBP23.04■■□□□ 1.28
SFXN2-206ENST00000602544 ATP10AO60312 1499 aa23.04■■□□□ 1.28
SFXN2-206ENST00000602544 ARHGEF12Q9NZN5 1544 aa23.03■■□□□ 1.28
SFXN2-206ENST00000602544 SUPT6HQ7KZ85 1726 aaKnown RBP23.02■■□□□ 1.28
SFXN2-206ENST00000602544 C9orf84Q5VXU9 1444 aa23■■□□□ 1.27
SFXN2-206ENST00000602544 MLH3Q9UHC1 1453 aa22.99■■□□□ 1.27
SFXN2-206ENST00000602544 SYCP2Q9BX26 1530 aa22.99■■□□□ 1.27
SFXN2-206ENST00000602544 SAMD9LQ8IVG5 1584 aa22.99■■□□□ 1.27
SFXN2-206ENST00000602544 KDM5CP41229 1560 aa22.98■■□□□ 1.27
SFXN2-206ENST00000602544 RSPH4AQ5TD94 716 aa22.98■■□□□ 1.27
SFXN2-206ENST00000602544 ITSN2Q9NZM3 1697 aa22.95■■□□□ 1.26
SFXN2-206ENST00000602544 HECW2Q9P2P5 1572 aa22.95■■□□□ 1.26
SFXN2-206ENST00000602544 TSPY4P0CV99 314 aa22.93■■□□□ 1.26
SFXN2-206ENST00000602544 TSPY10P0CW01 314 aa22.93■■□□□ 1.26
SFXN2-206ENST00000602544 PLPPR3Q6T4P5 718 aa22.92■■□□□ 1.26
SFXN2-206ENST00000602544 ESF1Q9H501 851 aaKnown RBP22.92■■□□□ 1.26
SFXN2-206ENST00000602544 MYOM3Q5VTT5 1437 aa22.9■■□□□ 1.26
SFXN2-206ENST00000602544 CAMSAP2Q08AD1 1489 aa22.89■■□□□ 1.25
SFXN2-206ENST00000602544 MBD5Q9P267 1494 aa22.88■■□□□ 1.25
SFXN2-206ENST00000602544 MIA2Q96PC5 1412 aa22.87■■□□□ 1.25
SFXN2-206ENST00000602544 PTPRMP28827 1452 aa22.86■■□□□ 1.25
SFXN2-206ENST00000602544 BCORL1Q5H9F3 1711 aa22.86■■□□□ 1.25
SFXN2-206ENST00000602544 DIP2CQ9Y2E4 1556 aa22.86■■□□□ 1.25
SFXN2-206ENST00000602544 CCDC141Q6ZP82 1450 aa22.85■■□□□ 1.25
SFXN2-206ENST00000602544 ADAMTSL3P82987 1691 aa22.84■■□□□ 1.25
SFXN2-206ENST00000602544 ATP7AQ04656 1500 aa22.83■■□□□ 1.25
SFXN2-206ENST00000602544 RTEL1-TNFRSF6BF6WH68 1400 aa22.82■■□□□ 1.24
SFXN2-206ENST00000602544 ABCA6Q8N139 1617 aa22.82■■□□□ 1.24
SFXN2-206ENST00000602544 MADDQ8WXG6 1647 aa22.8■■□□□ 1.24
SFXN2-206ENST00000602544 KIDINS220Q9ULH0 1771 aa22.8■■□□□ 1.24
SFXN2-206ENST00000602544 REREQ9P2R6 1566 aa22.8■■□□□ 1.24
SFXN2-206ENST00000602544 A2MP01023 1474 aa22.79■■□□□ 1.24
SFXN2-206ENST00000602544 GGT6Q6P531 493 aa22.78■■□□□ 1.24
SFXN2-206ENST00000602544 AGLP35573 1532 aa22.77■■□□□ 1.24
SFXN2-206ENST00000602544 SIGLEC1Q9BZZ2 1709 aa22.75■■□□□ 1.23
SFXN2-206ENST00000602544 FAM50AQ14320 339 aaKnown RBP22.75■■□□□ 1.23
SFXN2-206ENST00000602544 PPARGC1BQ86YN6 1023 aaKnown RBP22.75■■□□□ 1.23
SFXN2-206ENST00000602544 INO80Q9ULG1 1556 aaPredicted RBP22.75■■□□□ 1.23
SFXN2-206ENST00000602544 DHX29Q7Z478 1369 aaKnown RBP22.75■■□□□ 1.23
SFXN2-206ENST00000602544 FGD6Q6ZV73 1430 aa22.74■■□□□ 1.23
SFXN2-206ENST00000602544 ARHGEF5Q12774 1597 aa22.74■■□□□ 1.23
SFXN2-206ENST00000602544 CEBPAP49715 358 aaPredicted RBP22.73■■□□□ 1.23
SFXN2-206ENST00000602544 RIMS1Q86UR5 1692 aaKnown RBP22.73■■□□□ 1.23
SFXN2-206ENST00000602544 KIF3BO15066 747 aa22.72■■□□□ 1.23
SFXN2-206ENST00000602544 PPP6R1Q9UPN7 881 aa22.7■■□□□ 1.22
SFXN2-206ENST00000602544 CNTLNQ9NXG0 1405 aa22.69■■□□□ 1.22
SFXN2-206ENST00000602544 PTPN23Q9H3S7 1636 aa22.68■■□□□ 1.22
SFXN2-206ENST00000602544 FER1L4A9Z1Z3 1794 aa22.66■■□□□ 1.22
SFXN2-206ENST00000602544 CHIC2Q9UKJ5 165 aa22.66■■□□□ 1.22
SFXN2-206ENST00000602544 RRP7BPQ9NSQ0 103 aa22.65■■□□□ 1.22
SFXN2-206ENST00000602544 TCOF1Q13428 1488 aaKnown RBP22.65■■□□□ 1.22
SFXN2-206ENST00000602544 ABCC5O15440 1437 aa22.65■■□□□ 1.22
SFXN2-206ENST00000602544 ADGBQ8N7X0 1667 aa22.64■■□□□ 1.21
SFXN2-206ENST00000602544 PLXNC1O60486 1568 aa22.63■■□□□ 1.21
SFXN2-206ENST00000602544 DAPK1P53355 1430 aa22.63■■□□□ 1.21
SFXN2-206ENST00000602544 ZMYM3Q14202 1370 aa22.62■■□□□ 1.21
SFXN2-206ENST00000602544 WASHC2CQ9Y4E1 1318 aa22.61■■□□□ 1.21
SFXN2-206ENST00000602544 ANKRD30AQ9BXX3 1397 aa22.6■■□□□ 1.21
SFXN2-206ENST00000602544 KIF15Q9NS87 1388 aa22.6■■□□□ 1.21
SFXN2-206ENST00000602544 SHANK2Q9UPX8 1470 aa22.59■■□□□ 1.21
SFXN2-206ENST00000602544 MAST1Q9Y2H9 1570 aa22.59■■□□□ 1.21
SFXN2-206ENST00000602544 HSPA2P54652 639 aa22.55■■□□□ 1.2
SFXN2-206ENST00000602544 ITGAEP38570 1179 aa22.54■■□□□ 1.2
SFXN2-206ENST00000602544 UHRF1BP1Q6BDS2 1440 aa22.54■■□□□ 1.2
SFXN2-206ENST00000602544 DUOX2Q9NRD8 1548 aa22.53■■□□□ 1.2
SFXN2-206ENST00000602544 LMTK3Q96Q04 1460 aa22.53■■□□□ 1.2
SFXN2-206ENST00000602544 DNMT1P26358 1616 aaKnown RBP22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms