RNA–Protein interactions for RNA: ENST00000602395.1

COMMD3-BMI1-206, Transcript of COMMD3-BMI1 readthrough, humanhuman

TSL 2

Gene COMMD3-BMI1, Length 621 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-BMI1-206ENST00000602395 PPP1R37O75864 691 aa15.4■□□□□ 0.06
COMMD3-BMI1-206ENST00000602395 HOXB1P14653 301 aaPredicted RBP15.39■□□□□ 0.05
COMMD3-BMI1-206ENST00000602395 POTEB3A0JP26 581 aa15.37■□□□□ 0.05
COMMD3-BMI1-206ENST00000602395 POTEBQ6S5H4 581 aa15.37■□□□□ 0.05
COMMD3-BMI1-206ENST00000602395 KIF3CO14782 793 aa15.36■□□□□ 0.05
COMMD3-BMI1-206ENST00000602395 FAM205CA6NFA0 338 aa15.35■□□□□ 0.05
COMMD3-BMI1-206ENST00000602395 RIMBP2O15034 1052 aa15.35■□□□□ 0.05
COMMD3-BMI1-206ENST00000602395 DNAJC5Q9H3Z4 198 aa15.35■□□□□ 0.05
COMMD3-BMI1-206ENST00000602395 HS3ST6Q96QI5 342 aa15.33■□□□□ 0.04
COMMD3-BMI1-206ENST00000602395 ZSWIM6Q9HCJ5 1215 aa15.33■□□□□ 0.04
COMMD3-BMI1-206ENST00000602395 C2orf72A6NCS6 295 aa15.32■□□□□ 0.04
COMMD3-BMI1-206ENST00000602395 NKX1-1Q15270 411 aaPredicted RBP15.3■□□□□ 0.04
COMMD3-BMI1-206ENST00000602395 GPR153Q6NV75 609 aa15.29■□□□□ 0.04
COMMD3-BMI1-206ENST00000602395 TMC2Q8TDI7 906 aa15.23■□□□□ 0.03
COMMD3-BMI1-206ENST00000602395 ERBB3P21860 1342 aa15.22■□□□□ 0.03
COMMD3-BMI1-206ENST00000602395 ARSIQ5FYB1 569 aa15.21■□□□□ 0.03
COMMD3-BMI1-206ENST00000602395 KRTAP3-3Q9BYR6 98 aa15.2■□□□□ 0.02
COMMD3-BMI1-206ENST00000602395 KRTAP3-2Q9BYR7 98 aa15.2■□□□□ 0.02
COMMD3-BMI1-206ENST00000602395 RYDENQ9NUL5 291 aaKnown RBP15.17■□□□□ 0.02
COMMD3-BMI1-206ENST00000602395 SPNS2Q8IVW8 549 aa15.16■□□□□ 0.02
COMMD3-BMI1-206ENST00000602395 KHSRPQ92945 711 aaKnown RBP eCLIP15.16■□□□□ 0.028e-7■□□□□ 9.2
COMMD3-BMI1-206ENST00000602395 SLC34A2O95436 690 aa15.15■□□□□ 0.02
COMMD3-BMI1-206ENST00000602395 VARS2Q5ST30 1063 aaKnown RBP15.15■□□□□ 0.02
COMMD3-BMI1-206ENST00000602395 GPHNQ9NQX3 736 aaPredicted RBP15.11■□□□□ 0.01
COMMD3-BMI1-206ENST00000602395 DCAF8L2P0C7V8 631 aa15.1■□□□□ 0.01
COMMD3-BMI1-206ENST00000602395 GTPBP6O43824 516 aaPredicted RBP15.09■□□□□ 0.01
COMMD3-BMI1-206ENST00000602395 FOXK1P85037 733 aa15.09■□□□□ 0.01
COMMD3-BMI1-206ENST00000602395 PCDHGA4Q9Y5G9 962 aa15.08■□□□□ 0
COMMD3-BMI1-206ENST00000602395 MMRN1Q13201 1228 aa15.07■□□□□ 0
COMMD3-BMI1-206ENST00000602395 ZNF687Q8N1G0 1237 aa15.07■□□□□ 0
COMMD3-BMI1-206ENST00000602395 ZNF316A6NFI3 1004 aaPredicted RBP15.06■□□□□ 0
COMMD3-BMI1-206ENST00000602395 PLPP6Q8IY26 295 aa15.05■□□□□ -0
COMMD3-BMI1-206ENST00000602395 NUDT7P0C024 238 aa15.04■□□□□ -0
COMMD3-BMI1-206ENST00000602395 DSG2Q14126 1118 aa15.03■□□□□ -0
COMMD3-BMI1-206ENST00000602395 PTCD2Q8WV60 388 aaKnown RBP15.01□□□□□ -0.01
COMMD3-BMI1-206ENST00000602395 CRISPLD2Q9H0B8 497 aa14.99□□□□□ -0.01
COMMD3-BMI1-206ENST00000602395 LHX6Q9UPM6 363 aa14.97□□□□□ -0.01
COMMD3-BMI1-206ENST00000602395 KDM4FA0A1W2PPD8 638 aa14.96□□□□□ -0.01
COMMD3-BMI1-206ENST00000602395 NCKAP5LQ9HCH0 1330 aa14.93□□□□□ -0.02
COMMD3-BMI1-206ENST00000602395 PDE4AP27815 886 aa14.91□□□□□ -0.02
COMMD3-BMI1-206ENST00000602395 AMER1Q5JTC6 1135 aaPredicted RBP14.9□□□□□ -0.02
COMMD3-BMI1-206ENST00000602395 TBC1D12O60347 775 aa14.88□□□□□ -0.03
COMMD3-BMI1-206ENST00000602395 PPP1R15BQ5SWA1 713 aa14.87□□□□□ -0.03
COMMD3-BMI1-206ENST00000602395 OXER1Q8TDS5 423 aa14.86□□□□□ -0.03
COMMD3-BMI1-206ENST00000602395 RTN4Q9NQC3 1192 aaKnown RBP14.85□□□□□ -0.03
COMMD3-BMI1-206ENST00000602395 POTEEQ6S8J3 1075 aa14.84□□□□□ -0.03
COMMD3-BMI1-206ENST00000602395 PSDA5PKW4 1024 aaPredicted RBP14.83□□□□□ -0.04
COMMD3-BMI1-206ENST00000602395 BBXQ8WY36 941 aaPredicted RBP14.83□□□□□ -0.04
COMMD3-BMI1-206ENST00000602395 PBX2P40425 430 aa14.82□□□□□ -0.04
COMMD3-BMI1-206ENST00000602395 LARP6Q9BRS8 491 aaKnown RBP14.82□□□□□ -0.04
COMMD3-BMI1-206ENST00000602395 LSM11P83369 360 aaKnown RBP eCLIP14.8□□□□□ -0.04
COMMD3-BMI1-206ENST00000602395 ANKRD13DQ6ZTN6 518 aa14.8□□□□□ -0.04
COMMD3-BMI1-206ENST00000602395 UPF1Q92900 1129 aaKnown RBP eCLIP14.8□□□□□ -0.04
COMMD3-BMI1-206ENST00000602395 MFSD10Q14728 455 aa14.79□□□□□ -0.04
COMMD3-BMI1-206ENST00000602395 CADPS2Q86UW7 1296 aa14.79□□□□□ -0.04
COMMD3-BMI1-206ENST00000602395 DDX27Q96GQ7 796 aaKnown RBP14.78□□□□□ -0.04
COMMD3-BMI1-206ENST00000602395 AXIN2Q9Y2T1 843 aa14.78□□□□□ -0.04
COMMD3-BMI1-206ENST00000602395 MYT1LQ9UL68 1186 aa14.74□□□□□ -0.05
COMMD3-BMI1-206ENST00000602395 ARHGAP33O14559 1287 aa14.73□□□□□ -0.05
COMMD3-BMI1-206ENST00000602395 PTGER2P43116 358 aa14.72□□□□□ -0.05
COMMD3-BMI1-206ENST00000602395 PPP4R3BQ5MIZ7 849 aa14.71□□□□□ -0.05
COMMD3-BMI1-206ENST00000602395 RNF166Q96A37 237 aaPredicted RBP14.71□□□□□ -0.05
COMMD3-BMI1-206ENST00000602395 ANO8Q9HCE9 1232 aaPredicted RBP14.69□□□□□ -0.06
COMMD3-BMI1-206ENST00000602395 SPRYD3Q8NCJ5 442 aa14.66□□□□□ -0.06
COMMD3-BMI1-206ENST00000602395 EMILIN3Q9NT22 766 aa14.66□□□□□ -0.06
COMMD3-BMI1-206ENST00000602395 EVI5O60447 810 aa14.65□□□□□ -0.06
COMMD3-BMI1-206ENST00000602395 PSEN2P49810 448 aa14.65□□□□□ -0.06
COMMD3-BMI1-206ENST00000602395 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.64□□□□□ -0.07
COMMD3-BMI1-206ENST00000602395 DMRTA1Q5VZB9 504 aa14.63□□□□□ -0.07
COMMD3-BMI1-206ENST00000602395 FOSBP53539 338 aa14.62□□□□□ -0.07
COMMD3-BMI1-206ENST00000602395 MAP3K9P80192 1104 aa14.62□□□□□ -0.07
COMMD3-BMI1-206ENST00000602395 ZNF454Q8N9F8 522 aa14.62□□□□□ -0.07
COMMD3-BMI1-206ENST00000602395 ADGRD1Q6QNK2 874 aa14.61□□□□□ -0.07
COMMD3-BMI1-206ENST00000602395 TK2O00142 265 aa14.59□□□□□ -0.07
COMMD3-BMI1-206ENST00000602395 CAMK2BQ13554 666 aa14.58□□□□□ -0.08
COMMD3-BMI1-206ENST00000602395 KCNK17Q96T54 332 aa14.57□□□□□ -0.08
COMMD3-BMI1-206ENST00000602395 BCL2L12Q9HB09 334 aa14.57□□□□□ -0.08
COMMD3-BMI1-206ENST00000602395 JPH4Q96JJ6 628 aa14.56□□□□□ -0.08
COMMD3-BMI1-206ENST00000602395 HRO43593 1189 aa14.54□□□□□ -0.08
COMMD3-BMI1-206ENST00000602395 PAXIP1Q6ZW49 1069 aaPredicted RBP14.53□□□□□ -0.08
COMMD3-BMI1-206ENST00000602395 KCNH8Q96L42 1107 aa14.52□□□□□ -0.09
COMMD3-BMI1-206ENST00000602395 ZDHHC16Q969W1 377 aa14.51□□□□□ -0.09
COMMD3-BMI1-206ENST00000602395 CFAP44Q96MT7 982 aa14.51□□□□□ -0.09
COMMD3-BMI1-206ENST00000602395 ADAM33Q9BZ11 813 aa14.48□□□□□ -0.09
COMMD3-BMI1-206ENST00000602395 PTPREP23469 700 aa14.47□□□□□ -0.09
COMMD3-BMI1-206ENST00000602395 VPS9D1Q9Y2B5 631 aa14.47□□□□□ -0.09
COMMD3-BMI1-206ENST00000602395 PCDHGA10Q9Y5H3 936 aa14.47□□□□□ -0.09
COMMD3-BMI1-206ENST00000602395 DPYSL4O14531 572 aa14.46□□□□□ -0.09
COMMD3-BMI1-206ENST00000602395 SLC4A5Q9BY07 1137 aa14.46□□□□□ -0.09
COMMD3-BMI1-206ENST00000602395 PHF14O94880 888 aa14.42□□□□□ -0.1
COMMD3-BMI1-206ENST00000602395 ZBED2Q9BTP6 218 aa14.41□□□□□ -0.1
COMMD3-BMI1-206ENST00000602395 TYW1BQ6NUM6 668 aa14.39□□□□□ -0.11
COMMD3-BMI1-206ENST00000602395 STAC3Q96MF2 364 aa14.39□□□□□ -0.11
COMMD3-BMI1-206ENST00000602395 FBXW7Q969H0 707 aa14.38□□□□□ -0.11
COMMD3-BMI1-206ENST00000602395 BHMG1C9JSJ3 638 aaPredicted RBP14.37□□□□□ -0.11
COMMD3-BMI1-206ENST00000602395 HCSTQ9UBK5 93 aa14.37□□□□□ -0.11
COMMD3-BMI1-206ENST00000602395 E2F4Q16254 413 aa14.34□□□□□ -0.11
COMMD3-BMI1-206ENST00000602395 EPAS1Q99814 870 aa14.34□□□□□ -0.11
COMMD3-BMI1-206ENST00000602395 PPP1R3GB7ZBB8 358 aa14.32□□□□□ -0.12
COMMD3-BMI1-206ENST00000602395 COL9A1P20849 921 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms