RNA–Protein interactions for RNA: ENST00000602260.5

ZNF544-219, Transcript of zinc finger protein 544, humanhuman

TSL 4

Gene ZNF544, Length 552 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544-219ENST00000602260 RIMS1Q86UR5 1692 aaKnown RBP18.7■□□□□ 0.58
ZNF544-219ENST00000602260 PCF11O94913 1555 aaKnown RBP18.7■□□□□ 0.58
ZNF544-219ENST00000602260 CLIP1P30622 1438 aa18.68■□□□□ 0.58
ZNF544-219ENST00000602260 TROQ12816 1431 aaPredicted RBP18.66■□□□□ 0.58
ZNF544-219ENST00000602260 SCAPERQ9BY12 1400 aa18.66■□□□□ 0.58
ZNF544-219ENST00000602260 YEATS2Q9ULM3 1422 aa18.66■□□□□ 0.58
ZNF544-219ENST00000602260 CASKIN1Q8WXD9 1431 aa18.65■□□□□ 0.58
ZNF544-219ENST00000602260 CCDC18Q5T9S5 1454 aa18.64■□□□□ 0.57
ZNF544-219ENST00000602260 LMTK3Q96Q04 1460 aa18.64■□□□□ 0.57
ZNF544-219ENST00000602260 LRRIQ1Q96JM4 1722 aa18.63■□□□□ 0.57
ZNF544-219ENST00000602260 SIGLEC1Q9BZZ2 1709 aa18.63■□□□□ 0.57
ZNF544-219ENST00000602260 FER1L4A9Z1Z3 1794 aa18.63■□□□□ 0.57
ZNF544-219ENST00000602260 EFCAB2Q5VUJ9 269 aa18.63■□□□□ 0.57
ZNF544-219ENST00000602260 ZNF518AQ6AHZ1 1483 aa18.63■□□□□ 0.57
ZNF544-219ENST00000602260 ARHGAP5Q13017 1502 aa18.62■□□□□ 0.57
ZNF544-219ENST00000602260 KDM5CP41229 1560 aa18.61■□□□□ 0.57
ZNF544-219ENST00000602260 C9orf84Q5VXU9 1444 aa18.61■□□□□ 0.57
ZNF544-219ENST00000602260 ATP10AO60312 1499 aa18.6■□□□□ 0.57
ZNF544-219ENST00000602260 PREX2Q70Z35 1606 aa18.59■□□□□ 0.57
ZNF544-219ENST00000602260 ARHGEF12Q9NZN5 1544 aa18.58■□□□□ 0.56
ZNF544-219ENST00000602260 LOC105371045A0A1W2PR82 267 aa18.56■□□□□ 0.56
ZNF544-219ENST00000602260 CDC42BPBQ9Y5S2 1711 aa18.56■□□□□ 0.56
ZNF544-219ENST00000602260 FYCO1Q9BQS8 1478 aa18.56■□□□□ 0.56
ZNF544-219ENST00000602260 REREQ9P2R6 1566 aa18.55■□□□□ 0.56
ZNF544-219ENST00000602260 CEP162Q5TB80 1403 aa18.53■□□□□ 0.56
ZNF544-219ENST00000602260 ABCC1P33527 1531 aa18.53■□□□□ 0.56
ZNF544-219ENST00000602260 DIP2CQ9Y2E4 1556 aa18.51■□□□□ 0.55
ZNF544-219ENST00000602260 PREX1Q8TCU6 1659 aa18.51■□□□□ 0.55
ZNF544-219ENST00000602260 ITSN2Q9NZM3 1697 aa18.51■□□□□ 0.55
ZNF544-219ENST00000602260 FBXO41Q8TF61 875 aa18.5■□□□□ 0.55
ZNF544-219ENST00000602260 MLH3Q9UHC1 1453 aa18.5■□□□□ 0.55
ZNF544-219ENST00000602260 CDC42BPAQ5VT25 1732 aa18.49■□□□□ 0.55
ZNF544-219ENST00000602260 ABCA6Q8N139 1617 aa18.49■□□□□ 0.55
ZNF544-219ENST00000602260 MLECQ14165 292 aa18.48■□□□□ 0.55
ZNF544-219ENST00000602260 AGLP35573 1532 aa18.45■□□□□ 0.54
ZNF544-219ENST00000602260 AFAP1Q8N556 730 aa18.44■□□□□ 0.54
ZNF544-219ENST00000602260 PLPPR3Q6T4P5 718 aa18.42■□□□□ 0.54
ZNF544-219ENST00000602260 MYT1LQ9UL68 1186 aa18.42■□□□□ 0.54
ZNF544-219ENST00000602260 KIDINS220Q9ULH0 1771 aa18.42■□□□□ 0.54
ZNF544-219ENST00000602260 TRAPPC8Q9Y2L5 1435 aa18.41■□□□□ 0.54
ZNF544-219ENST00000602260 HSPA2P54652 639 aa18.41■□□□□ 0.54
ZNF544-219ENST00000602260 SETD1BQ9UPS6 1966 aaKnown RBP18.4■□□□□ 0.54
ZNF544-219ENST00000602260 MTUS2Q5JR59 1369 aa18.4■□□□□ 0.54
ZNF544-219ENST00000602260 SAMD9LQ8IVG5 1584 aa18.39■□□□□ 0.53
ZNF544-219ENST00000602260 UHRF1BP1Q6BDS2 1440 aa18.39■□□□□ 0.53
ZNF544-219ENST00000602260 C3P01024 1663 aa18.38■□□□□ 0.53
ZNF544-219ENST00000602260 PLEKHH2Q8IVE3 1493 aa18.38■□□□□ 0.53
ZNF544-219ENST00000602260 CNTLNQ9NXG0 1405 aa18.37■□□□□ 0.53
ZNF544-219ENST00000602260 SYCP2Q9BX26 1530 aa18.37■□□□□ 0.53
ZNF544-219ENST00000602260 GPATCH8Q9UKJ3 1502 aaKnown RBP18.36■□□□□ 0.53
ZNF544-219ENST00000602260 ZNF777Q9ULD5 760 aaPredicted RBP18.35■□□□□ 0.53
ZNF544-219ENST00000602260 MROH2AA6NES4 1674 aa18.34■□□□□ 0.53
ZNF544-219ENST00000602260 KIAA1107Q9UPP5 1409 aa18.34■□□□□ 0.53
ZNF544-219ENST00000602260 CCNB3Q8WWL7 1395 aa18.34■□□□□ 0.53
ZNF544-219ENST00000602260 ESF1Q9H501 851 aaKnown RBP18.34■□□□□ 0.53
ZNF544-219ENST00000602260 CFDP1Q9UEE9 299 aaPredicted RBP18.34■□□□□ 0.53
ZNF544-219ENST00000602260 INO80Q9ULG1 1556 aaPredicted RBP18.33■□□□□ 0.52
ZNF544-219ENST00000602260 VPS8Q8N3P4 1428 aa18.32■□□□□ 0.52
ZNF544-219ENST00000602260 ATP7AQ04656 1500 aa18.32■□□□□ 0.52
ZNF544-219ENST00000602260 EHBP1L1Q8N3D4 1523 aa18.32■□□□□ 0.52
ZNF544-219ENST00000602260 CEBPAP49715 358 aaPredicted RBP18.31■□□□□ 0.52
ZNF544-219ENST00000602260 DMRT2Q9Y5R5 561 aa18.31■□□□□ 0.52
ZNF544-219ENST00000602260 STRCQ7RTU9 1775 aa18.31■□□□□ 0.52
ZNF544-219ENST00000602260 PLXNC1O60486 1568 aa18.3■□□□□ 0.52
ZNF544-219ENST00000602260 HNRNPMP52272 730 aaKnown RBP eCLIP18.29■□□□□ 0.52
ZNF544-219ENST00000602260 SPAG9O60271 1321 aaKnown RBP18.28■□□□□ 0.52
ZNF544-219ENST00000602260 SUPT6HQ7KZ85 1726 aaKnown RBP18.27■□□□□ 0.52
ZNF544-219ENST00000602260 TIAM1Q13009 1591 aa18.27■□□□□ 0.52
ZNF544-219ENST00000602260 NPATQ14207 1427 aa18.27■□□□□ 0.52
ZNF544-219ENST00000602260 ADGBQ8N7X0 1667 aa18.27■□□□□ 0.52
ZNF544-219ENST00000602260 CERKQ8TCT0 537 aa18.26■□□□□ 0.51
ZNF544-219ENST00000602260 ZNF644Q9H582 1327 aaPredicted RBP18.24■□□□□ 0.51
ZNF544-219ENST00000602260 A2MP01023 1474 aa18.24■□□□□ 0.51
ZNF544-219ENST00000602260 PTPRTO14522 1441 aa18.23■□□□□ 0.51
ZNF544-219ENST00000602260 NCOA2Q15596 1464 aa18.22■□□□□ 0.51
ZNF544-219ENST00000602260 CLTCQ00610 1675 aaKnown RBP18.22■□□□□ 0.51
ZNF544-219ENST00000602260 ZNF142P52746 1687 aaPredicted RBP18.21■□□□□ 0.51
ZNF544-219ENST00000602260 KANK4Q5T7N3 995 aaPredicted RBP18.2■□□□□ 0.5
ZNF544-219ENST00000602260 LRRC9Q6ZRR7 1453 aa18.2■□□□□ 0.5
ZNF544-219ENST00000602260 RTEL1-TNFRSF6BF6WH68 1400 aa18.19■□□□□ 0.5
ZNF544-219ENST00000602260 NCOA1Q15788 1441 aa18.19■□□□□ 0.5
ZNF544-219ENST00000602260 MAP3K1Q13233 1512 aa18.18■□□□□ 0.5
ZNF544-219ENST00000602260 MYO3AQ8NEV4 1616 aa18.18■□□□□ 0.5
ZNF544-219ENST00000602260 ZMYM3Q14202 1370 aa18.17■□□□□ 0.5
ZNF544-219ENST00000602260 PPP6R1Q9UPN7 881 aa18.17■□□□□ 0.5
ZNF544-219ENST00000602260 MBD5Q9P267 1494 aa18.17■□□□□ 0.5
ZNF544-219ENST00000602260 FAM135AQ9P2D6 1515 aa18.17■□□□□ 0.5
ZNF544-219ENST00000602260 CAMSAP1Q5T5Y3 1602 aa18.16■□□□□ 0.5
ZNF544-219ENST00000602260 APLP2Q06481 763 aa18.15■□□□□ 0.5
ZNF544-219ENST00000602260 IQSEC2Q5JU85 1478 aa18.14■□□□□ 0.5
ZNF544-219ENST00000602260 CCDC141Q6ZP82 1450 aa18.14■□□□□ 0.5
ZNF544-219ENST00000602260 CEP170BQ9Y4F5 1589 aaPredicted RBP18.14■□□□□ 0.49
ZNF544-219ENST00000602260 PLA2R1Q13018 1463 aa18.14■□□□□ 0.49
ZNF544-219ENST00000602260 RSPH4AQ5TD94 716 aa18.12■□□□□ 0.49
ZNF544-219ENST00000602260 PTPRKQ15262 1439 aa18.12■□□□□ 0.49
ZNF544-219ENST00000602260 CAMSAP2Q08AD1 1489 aa18.12■□□□□ 0.49
ZNF544-219ENST00000602260 LTBP4Q8N2S1 1624 aa18.11■□□□□ 0.49
ZNF544-219ENST00000602260 ARHGEF5Q12774 1597 aa18.1■□□□□ 0.49
ZNF544-219ENST00000602260 DHX29Q7Z478 1369 aaKnown RBP18.09■□□□□ 0.49
ZNF544-219ENST00000602260 GGT6Q6P531 493 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms