RNA–Protein interactions for RNA: ENST00000601453.2

ATM-225, Transcript of ATM serine/threonine kinase, humanhuman

TSL 3

Gene ATM, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-225ENST00000601453 POTEBQ6S5H4 581 aa12.76□□□□□ -0.37
ATM-225ENST00000601453 RIMBP2O15034 1052 aa12.73□□□□□ -0.37
ATM-225ENST00000601453 RGL2O15211 777 aa12.73□□□□□ -0.37
ATM-225ENST00000601453 SPNS2Q8IVW8 549 aa12.73□□□□□ -0.37
ATM-225ENST00000601453 MFRPQ9BY79 579 aa12.73□□□□□ -0.37
ATM-225ENST00000601453 ZSWIM6Q9HCJ5 1215 aa12.69□□□□□ -0.38
ATM-225ENST00000601453 MMRN1Q13201 1228 aa12.68□□□□□ -0.38
ATM-225ENST00000601453 KRTAP3-3Q9BYR6 98 aa12.68□□□□□ -0.38
ATM-225ENST00000601453 KRTAP3-2Q9BYR7 98 aa12.68□□□□□ -0.38
ATM-225ENST00000601453 ERBB3P21860 1342 aa12.63□□□□□ -0.39
ATM-225ENST00000601453 GPR153Q6NV75 609 aa12.62□□□□□ -0.39
ATM-225ENST00000601453 KIF3CO14782 793 aa12.58□□□□□ -0.4
ATM-225ENST00000601453 VARS2Q5ST30 1063 aaKnown RBP12.56□□□□□ -0.4
ATM-225ENST00000601453 C2orf72A6NCS6 295 aa12.54□□□□□ -0.4
ATM-225ENST00000601453 ARSIQ5FYB1 569 aa12.53□□□□□ -0.4
ATM-225ENST00000601453 ZNF687Q8N1G0 1237 aa12.51□□□□□ -0.41
ATM-225ENST00000601453 PPP1R37O75864 691 aa12.49□□□□□ -0.41
ATM-225ENST00000601453 HS6ST3Q8IZP7 471 aa12.49□□□□□ -0.41
ATM-225ENST00000601453 TMC2Q8TDI7 906 aa12.46□□□□□ -0.41
ATM-225ENST00000601453 KHSRPQ92945 711 aaKnown RBP eCLIP12.46□□□□□ -0.411e-7■■■□□ 15
ATM-225ENST00000601453 ZNF316A6NFI3 1004 aaPredicted RBP12.45□□□□□ -0.42
ATM-225ENST00000601453 SLC34A2O95436 690 aa12.45□□□□□ -0.42
ATM-225ENST00000601453 NUDT7P0C024 238 aa12.39□□□□□ -0.43
ATM-225ENST00000601453 CHGAP10645 457 aaKnown RBP12.39□□□□□ -0.43
ATM-225ENST00000601453 PCDHGA4Q9Y5G9 962 aa12.39□□□□□ -0.43
ATM-225ENST00000601453 DNAJC5Q9H3Z4 198 aa12.37□□□□□ -0.43
ATM-225ENST00000601453 FOXK1P85037 733 aa12.33□□□□□ -0.44
ATM-225ENST00000601453 LHX6Q9UPM6 363 aa12.33□□□□□ -0.44
ATM-225ENST00000601453 RNF166Q96A37 237 aaPredicted RBP12.32□□□□□ -0.44
ATM-225ENST00000601453 GPHNQ9NQX3 736 aaPredicted RBP12.32□□□□□ -0.44
ATM-225ENST00000601453 PTGER2P43116 358 aa12.31□□□□□ -0.44
ATM-225ENST00000601453 NKX1-1Q15270 411 aaPredicted RBP12.31□□□□□ -0.44
ATM-225ENST00000601453 MYT1LQ9UL68 1186 aa12.31□□□□□ -0.44
ATM-225ENST00000601453 PTCD2Q8WV60 388 aaKnown RBP12.3□□□□□ -0.44
ATM-225ENST00000601453 PBX2P40425 430 aa12.29□□□□□ -0.44
ATM-225ENST00000601453 LSM11P83369 360 aaKnown RBP eCLIP12.29□□□□□ -0.44
ATM-225ENST00000601453 RYDENQ9NUL5 291 aaKnown RBP12.29□□□□□ -0.44
ATM-225ENST00000601453 ANKRD13DQ6ZTN6 518 aa12.28□□□□□ -0.44
ATM-225ENST00000601453 PLPP6Q8IY26 295 aa12.28□□□□□ -0.44
ATM-225ENST00000601453 KDM4FA0A1W2PPD8 638 aa12.26□□□□□ -0.45
ATM-225ENST00000601453 DSG2Q14126 1118 aa12.25□□□□□ -0.45
ATM-225ENST00000601453 POTEEQ6S8J3 1075 aa12.25□□□□□ -0.45
ATM-225ENST00000601453 PSDA5PKW4 1024 aaPredicted RBP12.24□□□□□ -0.45
ATM-225ENST00000601453 AXIN2Q9Y2T1 843 aa12.2□□□□□ -0.46
ATM-225ENST00000601453 TBC1D12O60347 775 aa12.19□□□□□ -0.46
ATM-225ENST00000601453 CRISPLD2Q9H0B8 497 aa12.18□□□□□ -0.46
ATM-225ENST00000601453 ARHGAP33O14559 1287 aa12.17□□□□□ -0.46
ATM-225ENST00000601453 GTPBP6O43824 516 aaPredicted RBP12.13□□□□□ -0.47
ATM-225ENST00000601453 OXER1Q8TDS5 423 aa12.13□□□□□ -0.47
ATM-225ENST00000601453 PPP4R3BQ5MIZ7 849 aa12.11□□□□□ -0.47
ATM-225ENST00000601453 PPP1R15BQ5SWA1 713 aa12.11□□□□□ -0.47
ATM-225ENST00000601453 PDE4AP27815 886 aa12.1□□□□□ -0.47
ATM-225ENST00000601453 ADGRD1Q6QNK2 874 aa12.1□□□□□ -0.47
ATM-225ENST00000601453 NCKAP5LQ9HCH0 1330 aa12.1□□□□□ -0.47
ATM-225ENST00000601453 TK2O00142 265 aa12.08□□□□□ -0.48
ATM-225ENST00000601453 UPF1Q92900 1129 aaKnown RBP eCLIP12.07□□□□□ -0.48
ATM-225ENST00000601453 PSEN2P49810 448 aa12.06□□□□□ -0.48
ATM-225ENST00000601453 DMRTA1Q5VZB9 504 aa12.06□□□□□ -0.48
ATM-225ENST00000601453 DCAF8L2P0C7V8 631 aa12.03□□□□□ -0.48
ATM-225ENST00000601453 HRO43593 1189 aa12.02□□□□□ -0.49
ATM-225ENST00000601453 LARP6Q9BRS8 491 aaKnown RBP12.01□□□□□ -0.49
ATM-225ENST00000601453 DDX27Q96GQ7 796 aaKnown RBP12□□□□□ -0.49
ATM-225ENST00000601453 KCNH8Q96L42 1107 aa12□□□□□ -0.49
ATM-225ENST00000601453 ANO8Q9HCE9 1232 aaPredicted RBP12□□□□□ -0.49
ATM-225ENST00000601453 MFSD10Q14728 455 aa11.99□□□□□ -0.49
ATM-225ENST00000601453 ZNF454Q8N9F8 522 aa11.99□□□□□ -0.49
ATM-225ENST00000601453 KCNK17Q96T54 332 aa11.99□□□□□ -0.49
ATM-225ENST00000601453 FOSBP53539 338 aa11.97□□□□□ -0.49
ATM-225ENST00000601453 BCL2L12Q9HB09 334 aa11.97□□□□□ -0.49
ATM-225ENST00000601453 HCSTQ9UBK5 93 aa11.97□□□□□ -0.49
ATM-225ENST00000601453 EVI5O60447 810 aa11.94□□□□□ -0.5
ATM-225ENST00000601453 JPH4Q96JJ6 628 aa11.93□□□□□ -0.5
ATM-225ENST00000601453 VPS9D1Q9Y2B5 631 aa11.93□□□□□ -0.5
ATM-225ENST00000601453 SLC4A5Q9BY07 1137 aa11.92□□□□□ -0.5
ATM-225ENST00000601453 MAP3K9P80192 1104 aa11.91□□□□□ -0.5
ATM-225ENST00000601453 STAC3Q96MF2 364 aa11.91□□□□□ -0.5
ATM-225ENST00000601453 PTPREP23469 700 aa11.9□□□□□ -0.5
ATM-225ENST00000601453 CADPS2Q86UW7 1296 aa11.9□□□□□ -0.5
ATM-225ENST00000601453 EMILIN3Q9NT22 766 aa11.89□□□□□ -0.51
ATM-225ENST00000601453 ZDHHC16Q969W1 377 aa11.88□□□□□ -0.51
ATM-225ENST00000601453 KCTD12Q96CX2 325 aaKnown RBP11.87□□□□□ -0.51
ATM-225ENST00000601453 PLA2G2EQ9NZK7 142 aa11.87□□□□□ -0.51
ATM-225ENST00000601453 ZBED2Q9BTP6 218 aa11.85□□□□□ -0.51
ATM-225ENST00000601453 ADAM33Q9BZ11 813 aa11.85□□□□□ -0.51
ATM-225ENST00000601453 BHMG1C9JSJ3 638 aaPredicted RBP11.84□□□□□ -0.51
ATM-225ENST00000601453 BBXQ8WY36 941 aaPredicted RBP11.81□□□□□ -0.52
ATM-225ENST00000601453 PCDHGA10Q9Y5H3 936 aa11.81□□□□□ -0.52
ATM-225ENST00000601453 CAMK2BQ13554 666 aa11.8□□□□□ -0.52
ATM-225ENST00000601453 PPP1R3GB7ZBB8 358 aa11.76□□□□□ -0.53
ATM-225ENST00000601453 PHF14O94880 888 aa11.76□□□□□ -0.53
ATM-225ENST00000601453 TYW1BQ6NUM6 668 aa11.76□□□□□ -0.53
ATM-225ENST00000601453 MRPL50Q8N5N7 158 aaKnown RBP11.76□□□□□ -0.53
ATM-225ENST00000601453 FBXW7Q969H0 707 aa11.76□□□□□ -0.53
ATM-225ENST00000601453 NBPF3Q9H094 633 aa11.74□□□□□ -0.53
ATM-225ENST00000601453 GOLGA8CPA6NN73 597 aa11.73□□□□□ -0.53
ATM-225ENST00000601453 PTPN5P54829 565 aa11.73□□□□□ -0.53
ATM-225ENST00000601453 THSD4Q6ZMP0 1018 aa11.73□□□□□ -0.53
ATM-225ENST00000601453 DPYSL4O14531 572 aa11.72□□□□□ -0.53
ATM-225ENST00000601453 WNT2BQ93097 391 aa11.72□□□□□ -0.53
ATM-225ENST00000601453 RABGEF1Q9UJ41 708 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms