RNA–Protein interactions for RNA: ENST00000601220.5

CHMP2A-208, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-208ENST00000601220 TROQ12816 1431 aaPredicted RBP29.61■■■□□ 2.33
CHMP2A-208ENST00000601220 ZFYVE16Q7Z3T8 1539 aa29.61■■■□□ 2.33
CHMP2A-208ENST00000601220 KIF14Q15058 1648 aa29.58■■■□□ 2.33
CHMP2A-208ENST00000601220 SIGLEC1Q9BZZ2 1709 aa29.57■■■□□ 2.32
CHMP2A-208ENST00000601220 LRRIQ1Q96JM4 1722 aa29.53■■■□□ 2.32
CHMP2A-208ENST00000601220 CASKIN1Q8WXD9 1431 aa29.52■■■□□ 2.32
CHMP2A-208ENST00000601220 MYO5CQ9NQX4 1742 aa29.51■■■□□ 2.31
CHMP2A-208ENST00000601220 CLIP1P30622 1438 aa29.49■■■□□ 2.31
CHMP2A-208ENST00000601220 RIMS1Q86UR5 1692 aaKnown RBP29.49■■■□□ 2.31
CHMP2A-208ENST00000601220 ATP10AO60312 1499 aa29.48■■■□□ 2.31
CHMP2A-208ENST00000601220 LMTK3Q96Q04 1460 aa29.48■■■□□ 2.31
CHMP2A-208ENST00000601220 PCF11O94913 1555 aaKnown RBP29.47■■■□□ 2.31
CHMP2A-208ENST00000601220 AFAP1Q8N556 730 aa29.46■■■□□ 2.31
CHMP2A-208ENST00000601220 ARHGAP5Q13017 1502 aa29.45■■■□□ 2.3
CHMP2A-208ENST00000601220 MLECQ14165 292 aa29.44■■■□□ 2.3
CHMP2A-208ENST00000601220 C9orf84Q5VXU9 1444 aa29.43■■■□□ 2.3
CHMP2A-208ENST00000601220 ZNF518AQ6AHZ1 1483 aa29.42■■■□□ 2.3
CHMP2A-208ENST00000601220 CCDC18Q5T9S5 1454 aa29.42■■■□□ 2.3
CHMP2A-208ENST00000601220 KDM5CP41229 1560 aa29.4■■■□□ 2.3
CHMP2A-208ENST00000601220 ARHGEF12Q9NZN5 1544 aa29.38■■■□□ 2.29
CHMP2A-208ENST00000601220 PLPPR3Q6T4P5 718 aa29.36■■■□□ 2.29
CHMP2A-208ENST00000601220 CDC42BPBQ9Y5S2 1711 aa29.36■■■□□ 2.29
CHMP2A-208ENST00000601220 FYCO1Q9BQS8 1478 aa29.35■■■□□ 2.29
CHMP2A-208ENST00000601220 HSPA2P54652 639 aa29.33■■■□□ 2.29
CHMP2A-208ENST00000601220 TRAPPC8Q9Y2L5 1435 aa29.33■■■□□ 2.29
CHMP2A-208ENST00000601220 MLH3Q9UHC1 1453 aa29.32■■■□□ 2.28
CHMP2A-208ENST00000601220 PREX2Q70Z35 1606 aa29.31■■■□□ 2.28
CHMP2A-208ENST00000601220 DIP2CQ9Y2E4 1556 aa29.29■■■□□ 2.28
CHMP2A-208ENST00000601220 ABCC1P33527 1531 aa29.29■■■□□ 2.28
CHMP2A-208ENST00000601220 FER1L4A9Z1Z3 1794 aa29.29■■■□□ 2.28
CHMP2A-208ENST00000601220 REREQ9P2R6 1566 aa29.26■■■□□ 2.27
CHMP2A-208ENST00000601220 CEBPAP49715 358 aaPredicted RBP29.25■■■□□ 2.27
CHMP2A-208ENST00000601220 FBXO41Q8TF61 875 aa29.25■■■□□ 2.27
CHMP2A-208ENST00000601220 MYT1LQ9UL68 1186 aa29.24■■■□□ 2.27
CHMP2A-208ENST00000601220 GPATCH8Q9UKJ3 1502 aaKnown RBP29.22■■■□□ 2.27
CHMP2A-208ENST00000601220 ABCA6Q8N139 1617 aa29.22■■■□□ 2.27
CHMP2A-208ENST00000601220 CDC42BPAQ5VT25 1732 aa29.21■■■□□ 2.27
CHMP2A-208ENST00000601220 ITSN2Q9NZM3 1697 aa29.2■■■□□ 2.26
CHMP2A-208ENST00000601220 AGLP35573 1532 aa29.19■■■□□ 2.26
CHMP2A-208ENST00000601220 ZNF777Q9ULD5 760 aaPredicted RBP29.15■■■□□ 2.26
CHMP2A-208ENST00000601220 SAMD9LQ8IVG5 1584 aa29.14■■■□□ 2.26
CHMP2A-208ENST00000601220 KIDINS220Q9ULH0 1771 aa29.14■■■□□ 2.26
CHMP2A-208ENST00000601220 HNRNPMP52272 730 aaKnown RBP eCLIP29.12■■■□□ 2.25
CHMP2A-208ENST00000601220 KIAA1107Q9UPP5 1409 aa29.1■■■□□ 2.25
CHMP2A-208ENST00000601220 SYCP2Q9BX26 1530 aa29.09■■■□□ 2.25
CHMP2A-208ENST00000601220 CFDP1Q9UEE9 299 aaPredicted RBP29.08■■■□□ 2.25
CHMP2A-208ENST00000601220 PREX1Q8TCU6 1659 aa29.08■■■□□ 2.25
CHMP2A-208ENST00000601220 CCNB3Q8WWL7 1395 aa29.06■■■□□ 2.24
CHMP2A-208ENST00000601220 SPAG9O60271 1321 aaKnown RBP29.06■■■□□ 2.24
CHMP2A-208ENST00000601220 MTUS2Q5JR59 1369 aa29.05■■■□□ 2.24
CHMP2A-208ENST00000601220 UHRF1BP1Q6BDS2 1440 aa29.03■■■□□ 2.24
CHMP2A-208ENST00000601220 PLEKHH2Q8IVE3 1493 aa29.02■■■□□ 2.24
CHMP2A-208ENST00000601220 C3P01024 1663 aa29■■■□□ 2.23
CHMP2A-208ENST00000601220 CEP162Q5TB80 1403 aa29■■■□□ 2.23
CHMP2A-208ENST00000601220 ESF1Q9H501 851 aaKnown RBP28.99■■■□□ 2.23
CHMP2A-208ENST00000601220 CNTLNQ9NXG0 1405 aa28.99■■■□□ 2.23
CHMP2A-208ENST00000601220 ZNF644Q9H582 1327 aaPredicted RBP28.98■■■□□ 2.23
CHMP2A-208ENST00000601220 CERKQ8TCT0 537 aa28.98■■■□□ 2.23
CHMP2A-208ENST00000601220 SETD1BQ9UPS6 1966 aaKnown RBP28.97■■■□□ 2.23
CHMP2A-208ENST00000601220 ATP7AQ04656 1500 aa28.97■■■□□ 2.23
CHMP2A-208ENST00000601220 TIAM1Q13009 1591 aa28.95■■■□□ 2.22
CHMP2A-208ENST00000601220 INO80Q9ULG1 1556 aaPredicted RBP28.95■■■□□ 2.22
CHMP2A-208ENST00000601220 STRCQ7RTU9 1775 aa28.95■■■□□ 2.22
CHMP2A-208ENST00000601220 MBD5Q9P267 1494 aa28.94■■■□□ 2.22
CHMP2A-208ENST00000601220 DMRT2Q9Y5R5 561 aa28.93■■■□□ 2.22
CHMP2A-208ENST00000601220 EHBP1L1Q8N3D4 1523 aa28.93■■■□□ 2.22
CHMP2A-208ENST00000601220 PLXNC1O60486 1568 aa28.92■■■□□ 2.22
CHMP2A-208ENST00000601220 A2MP01023 1474 aa28.91■■■□□ 2.22
CHMP2A-208ENST00000601220 ZMYM3Q14202 1370 aa28.91■■■□□ 2.22
CHMP2A-208ENST00000601220 NPATQ14207 1427 aa28.87■■■□□ 2.21
CHMP2A-208ENST00000601220 SUPT6HQ7KZ85 1726 aaKnown RBP28.86■■■□□ 2.21
CHMP2A-208ENST00000601220 PTPRTO14522 1441 aa28.85■■■□□ 2.21
CHMP2A-208ENST00000601220 MROH2AA6NES4 1674 aa28.84■■■□□ 2.21
CHMP2A-208ENST00000601220 RTEL1-TNFRSF6BF6WH68 1400 aa28.84■■■□□ 2.21
CHMP2A-208ENST00000601220 NCOA2Q15596 1464 aa28.81■■■□□ 2.2
CHMP2A-208ENST00000601220 GGT6Q6P531 493 aa28.81■■■□□ 2.2
CHMP2A-208ENST00000601220 NCOA1Q15788 1441 aa28.8■■■□□ 2.2
CHMP2A-208ENST00000601220 LOC105371045A0A1W2PR82 267 aa28.8■■■□□ 2.2
CHMP2A-208ENST00000601220 PPP6R1Q9UPN7 881 aa28.8■■■□□ 2.2
CHMP2A-208ENST00000601220 PTPRKQ15262 1439 aa28.77■■■□□ 2.2
CHMP2A-208ENST00000601220 DHX29Q7Z478 1369 aaKnown RBP28.77■■■□□ 2.2
CHMP2A-208ENST00000601220 CLTCQ00610 1675 aaKnown RBP28.76■■■□□ 2.19
CHMP2A-208ENST00000601220 ADGBQ8N7X0 1667 aa28.76■■■□□ 2.19
CHMP2A-208ENST00000601220 RSPH4AQ5TD94 716 aa28.73■■■□□ 2.19
CHMP2A-208ENST00000601220 CAMSAP2Q08AD1 1489 aa28.72■■■□□ 2.19
CHMP2A-208ENST00000601220 CCDC141Q6ZP82 1450 aa28.72■■■□□ 2.19
CHMP2A-208ENST00000601220 VPS8Q8N3P4 1428 aa28.71■■■□□ 2.19
CHMP2A-208ENST00000601220 CAMSAP1Q5T5Y3 1602 aa28.71■■■□□ 2.19
CHMP2A-208ENST00000601220 LTBP4Q8N2S1 1624 aa28.69■■■□□ 2.18
CHMP2A-208ENST00000601220 LRRC9Q6ZRR7 1453 aa28.68■■■□□ 2.18
CHMP2A-208ENST00000601220 NCKAP5LQ9HCH0 1330 aa28.67■■■□□ 2.18
CHMP2A-208ENST00000601220 KIF3BO15066 747 aa28.65■■■□□ 2.18
CHMP2A-208ENST00000601220 MYO3AQ8NEV4 1616 aa28.64■■■□□ 2.18
CHMP2A-208ENST00000601220 KANK4Q5T7N3 995 aaPredicted RBP28.63■■■□□ 2.17
CHMP2A-208ENST00000601220 ARHGEF5Q12774 1597 aa28.62■■■□□ 2.17
CHMP2A-208ENST00000601220 ZNF142P52746 1687 aaPredicted RBP28.62■■■□□ 2.17
CHMP2A-208ENST00000601220 PLA2R1Q13018 1463 aa28.62■■■□□ 2.17
CHMP2A-208ENST00000601220 CEP170BQ9Y4F5 1589 aaPredicted RBP28.62■■■□□ 2.17
CHMP2A-208ENST00000601220 PKD2Q13563 968 aa28.6■■■□□ 2.17
CHMP2A-208ENST00000601220 TCOF1Q13428 1488 aaKnown RBP28.59■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 88.1 ms