RNA–Protein interactions for RNA: ENST00000600816.1

TMEM143-211, Transcript of transmembrane protein 143, humanhuman

TSL 2

Gene TMEM143, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM143-211ENST00000600816 POGZQ7Z3K3 1410 aa25.9■■□□□ 1.74
TMEM143-211ENST00000600816 YEATS2Q9ULM3 1422 aa25.88■■□□□ 1.73
TMEM143-211ENST00000600816 MTUS2Q5JR59 1369 aa25.86■■□□□ 1.73
TMEM143-211ENST00000600816 ZMYM4Q5VZL5 1548 aa25.86■■□□□ 1.73
TMEM143-211ENST00000600816 ARHGEF40Q8TER5 1519 aa25.84■■□□□ 1.73
TMEM143-211ENST00000600816 AFAP1Q8N556 730 aa25.84■■□□□ 1.73
TMEM143-211ENST00000600816 PREX2Q70Z35 1606 aa25.83■■□□□ 1.73
TMEM143-211ENST00000600816 ARID4BQ4LE39 1312 aaPredicted RBP25.83■■□□□ 1.73
TMEM143-211ENST00000600816 CDC42BPBQ9Y5S2 1711 aa25.83■■□□□ 1.72
TMEM143-211ENST00000600816 ZFYVE16Q7Z3T8 1539 aa25.81■■□□□ 1.72
TMEM143-211ENST00000600816 GPATCH8Q9UKJ3 1502 aaKnown RBP25.81■■□□□ 1.72
TMEM143-211ENST00000600816 VPS8Q8N3P4 1428 aa25.8■■□□□ 1.72
TMEM143-211ENST00000600816 MAGI2Q86UL8 1455 aa25.79■■□□□ 1.72
TMEM143-211ENST00000600816 ARHGEF12Q9NZN5 1544 aa25.79■■□□□ 1.72
TMEM143-211ENST00000600816 ZNF777Q9ULD5 760 aaPredicted RBP25.79■■□□□ 1.72
TMEM143-211ENST00000600816 ZNF518AQ6AHZ1 1483 aa25.78■■□□□ 1.72
TMEM143-211ENST00000600816 TRAPPC8Q9Y2L5 1435 aa25.77■■□□□ 1.72
TMEM143-211ENST00000600816 CDC42BPAQ5VT25 1732 aa25.77■■□□□ 1.72
TMEM143-211ENST00000600816 CCNB3Q8WWL7 1395 aa25.76■■□□□ 1.71
TMEM143-211ENST00000600816 ABCC1P33527 1531 aa25.76■■□□□ 1.71
TMEM143-211ENST00000600816 EHBP1L1Q8N3D4 1523 aa25.74■■□□□ 1.71
TMEM143-211ENST00000600816 CFDP1Q9UEE9 299 aaPredicted RBP25.73■■□□□ 1.71
TMEM143-211ENST00000600816 KDM5CP41229 1560 aa25.72■■□□□ 1.71
TMEM143-211ENST00000600816 MYT1LQ9UL68 1186 aa25.71■■□□□ 1.71
TMEM143-211ENST00000600816 SIGLEC1Q9BZZ2 1709 aa25.71■■□□□ 1.71
TMEM143-211ENST00000600816 SAMD9LQ8IVG5 1584 aa25.7■■□□□ 1.71
TMEM143-211ENST00000600816 ADAMTSL3P82987 1691 aa25.7■■□□□ 1.7
TMEM143-211ENST00000600816 ATP10AO60312 1499 aa25.69■■□□□ 1.7
TMEM143-211ENST00000600816 HNRNPMP52272 730 aaKnown RBP eCLIP25.69■■□□□ 1.7
TMEM143-211ENST00000600816 TIAM1Q13009 1591 aa25.69■■□□□ 1.7
TMEM143-211ENST00000600816 BCORL1Q5H9F3 1711 aa25.68■■□□□ 1.7
TMEM143-211ENST00000600816 ZNF644Q9H582 1327 aaPredicted RBP25.67■■□□□ 1.7
TMEM143-211ENST00000600816 MLECQ14165 292 aa25.67■■□□□ 1.7
TMEM143-211ENST00000600816 C9orf84Q5VXU9 1444 aa25.66■■□□□ 1.7
TMEM143-211ENST00000600816 ITSN2Q9NZM3 1697 aa25.66■■□□□ 1.7
TMEM143-211ENST00000600816 SYCP2Q9BX26 1530 aa25.66■■□□□ 1.7
TMEM143-211ENST00000600816 PTPRMP28827 1452 aa25.65■■□□□ 1.7
TMEM143-211ENST00000600816 MLH3Q9UHC1 1453 aa25.65■■□□□ 1.7
TMEM143-211ENST00000600816 HECW2Q9P2P5 1572 aa25.65■■□□□ 1.7
TMEM143-211ENST00000600816 KANK4Q5T7N3 995 aaPredicted RBP25.64■■□□□ 1.7
TMEM143-211ENST00000600816 NCOA2Q15596 1464 aa25.64■■□□□ 1.69
TMEM143-211ENST00000600816 MADDQ8WXG6 1647 aa25.63■■□□□ 1.69
TMEM143-211ENST00000600816 LRRC9Q6ZRR7 1453 aa25.62■■□□□ 1.69
TMEM143-211ENST00000600816 KIAA1107Q9UPP5 1409 aa25.62■■□□□ 1.69
TMEM143-211ENST00000600816 DIP2CQ9Y2E4 1556 aa25.61■■□□□ 1.69
TMEM143-211ENST00000600816 PLEKHH2Q8IVE3 1493 aa25.59■■□□□ 1.69
TMEM143-211ENST00000600816 ABCA6Q8N139 1617 aa25.59■■□□□ 1.69
TMEM143-211ENST00000600816 SPAG9O60271 1321 aaKnown RBP25.58■■□□□ 1.69
TMEM143-211ENST00000600816 SUPT6HQ7KZ85 1726 aaKnown RBP25.56■■□□□ 1.68
TMEM143-211ENST00000600816 MAP3K1Q13233 1512 aa25.55■■□□□ 1.68
TMEM143-211ENST00000600816 PLPPR3Q6T4P5 718 aa25.55■■□□□ 1.68
TMEM143-211ENST00000600816 KIDINS220Q9ULH0 1771 aa25.54■■□□□ 1.68
TMEM143-211ENST00000600816 RIMS1Q86UR5 1692 aaKnown RBP25.53■■□□□ 1.68
TMEM143-211ENST00000600816 MBD5Q9P267 1494 aa25.53■■□□□ 1.68
TMEM143-211ENST00000600816 REREQ9P2R6 1566 aa25.5■■□□□ 1.67
TMEM143-211ENST00000600816 CAMSAP2Q08AD1 1489 aa25.48■■□□□ 1.67
TMEM143-211ENST00000600816 ATP7AQ04656 1500 aa25.47■■□□□ 1.67
TMEM143-211ENST00000600816 APLP2Q06481 763 aa25.47■■□□□ 1.67
TMEM143-211ENST00000600816 INO80Q9ULG1 1556 aaPredicted RBP25.45■■□□□ 1.66
TMEM143-211ENST00000600816 AGLP35573 1532 aa25.45■■□□□ 1.66
TMEM143-211ENST00000600816 CEBPAP49715 358 aaPredicted RBP25.43■■□□□ 1.66
TMEM143-211ENST00000600816 FER1L4A9Z1Z3 1794 aa25.41■■□□□ 1.66
TMEM143-211ENST00000600816 A2MP01023 1474 aa25.4■■□□□ 1.66
TMEM143-211ENST00000600816 CCDC141Q6ZP82 1450 aa25.4■■□□□ 1.66
TMEM143-211ENST00000600816 MYOM3Q5VTT5 1437 aa25.39■■□□□ 1.66
TMEM143-211ENST00000600816 RTEL1-TNFRSF6BF6WH68 1400 aa25.37■■□□□ 1.65
TMEM143-211ENST00000600816 LMTK3Q96Q04 1460 aa25.35■■□□□ 1.65
TMEM143-211ENST00000600816 RSPH4AQ5TD94 716 aa25.35■■□□□ 1.65
TMEM143-211ENST00000600816 PLXNC1O60486 1568 aa25.35■■□□□ 1.65
TMEM143-211ENST00000600816 MIA2Q96PC5 1412 aa25.34■■□□□ 1.65
TMEM143-211ENST00000600816 ESF1Q9H501 851 aaKnown RBP25.32■■□□□ 1.64
TMEM143-211ENST00000600816 ARHGEF5Q12774 1597 aa25.31■■□□□ 1.64
TMEM143-211ENST00000600816 TSPY4P0CV99 314 aa25.3■■□□□ 1.64
TMEM143-211ENST00000600816 TSPY10P0CW01 314 aa25.3■■□□□ 1.64
TMEM143-211ENST00000600816 HSPA2P54652 639 aa25.3■■□□□ 1.64
TMEM143-211ENST00000600816 GGT6Q6P531 493 aa25.3■■□□□ 1.64
TMEM143-211ENST00000600816 DHX29Q7Z478 1369 aaKnown RBP25.29■■□□□ 1.64
TMEM143-211ENST00000600816 ADGBQ8N7X0 1667 aa25.26■■□□□ 1.63
TMEM143-211ENST00000600816 CNTLNQ9NXG0 1405 aa25.25■■□□□ 1.63
TMEM143-211ENST00000600816 FGD6Q6ZV73 1430 aa25.22■■□□□ 1.63
TMEM143-211ENST00000600816 KIF3BO15066 747 aa25.22■■□□□ 1.63
TMEM143-211ENST00000600816 ZMYM3Q14202 1370 aa25.21■■□□□ 1.63
TMEM143-211ENST00000600816 C3P01024 1663 aa25.21■■□□□ 1.63
TMEM143-211ENST00000600816 PTPN23Q9H3S7 1636 aa25.19■■□□□ 1.62
TMEM143-211ENST00000600816 ABCC5O15440 1437 aa25.19■■□□□ 1.62
TMEM143-211ENST00000600816 MAST1Q9Y2H9 1570 aa25.18■■□□□ 1.62
TMEM143-211ENST00000600816 TCOF1Q13428 1488 aaKnown RBP25.16■■□□□ 1.62
TMEM143-211ENST00000600816 PPP6R1Q9UPN7 881 aa25.15■■□□□ 1.62
TMEM143-211ENST00000600816 CLTCQ00610 1675 aaKnown RBP25.14■■□□□ 1.62
TMEM143-211ENST00000600816 UHRF1BP1Q6BDS2 1440 aa25.14■■□□□ 1.62
TMEM143-211ENST00000600816 PPARGC1BQ86YN6 1023 aaKnown RBP25.14■■□□□ 1.62
TMEM143-211ENST00000600816 DAPK1P53355 1430 aa25.12■■□□□ 1.61
TMEM143-211ENST00000600816 PREX1Q8TCU6 1659 aa25.12■■□□□ 1.61
TMEM143-211ENST00000600816 MROH2AA6NES4 1674 aa25.11■■□□□ 1.61
TMEM143-211ENST00000600816 FAM50AQ14320 339 aaKnown RBP25.1■■□□□ 1.61
TMEM143-211ENST00000600816 RRP7BPQ9NSQ0 103 aa25.1■■□□□ 1.61
TMEM143-211ENST00000600816 CHIC2Q9UKJ5 165 aa25.09■■□□□ 1.61
TMEM143-211ENST00000600816 NPATQ14207 1427 aa25.09■■□□□ 1.61
TMEM143-211ENST00000600816 PTPRKQ15262 1439 aa25.09■■□□□ 1.61
TMEM143-211ENST00000600816 SHANK2Q9UPX8 1470 aa25.09■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms