RNA–Protein interactions for RNA: ENST00000600610.5

GTPBP3-221, Transcript of GTP binding protein 3, mitochondrial, human

TSL 1 (best)

Gene GTPBP3, Length 1,105 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GTPBP3-221	ENST00000600610	CDC42BPB	Q9Y5S2	1711 aa		32.29	■■■□□ 2.76
GTPBP3-221	ENST00000600610	ITSN2	Q9NZM3	1697 aa		32.27	■■■□□ 2.76
GTPBP3-221	ENST00000600610	KANK4	Q5T7N3	995 aa	Predicted RBP	32.27	■■■□□ 2.76
GTPBP3-221	ENST00000600610	CCNB3	Q8WWL7	1395 aa		32.26	■■■□□ 2.75
GTPBP3-221	ENST00000600610	NCOA2	Q15596	1464 aa		32.26	■■■□□ 2.75
GTPBP3-221	ENST00000600610	EFCAB2	Q5VUJ9	269 aa		32.25	■■■□□ 2.75
GTPBP3-221	ENST00000600610	GPATCH8	Q9UKJ3	1502 aa	Known RBP	32.24	■■■□□ 2.75
GTPBP3-221	ENST00000600610	ARHGAP5	Q13017	1502 aa		32.21	■■■□□ 2.75
GTPBP3-221	ENST00000600610	DENND4B	O75064	1496 aa	Predicted RBP	32.2	■■■□□ 2.75
GTPBP3-221	ENST00000600610	RAPGEF3	O95398	923 aa		32.19	■■■□□ 2.74
GTPBP3-221	ENST00000600610	RICTOR	Q6R327	1708 aa		32.15	■■■□□ 2.74
GTPBP3-221	ENST00000600610	ADGRL1	O94910	1474 aa		32.15	■■■□□ 2.74
GTPBP3-221	ENST00000600610	FRMPD1	Q5SYB0	1578 aa		32.14	■■■□□ 2.74
GTPBP3-221	ENST00000600610	CFDP1	Q9UEE9	299 aa	Predicted RBP	32.13	■■■□□ 2.73
GTPBP3-221	ENST00000600610	SCAPER	Q9BY12	1400 aa		32.11	■■■□□ 2.73
GTPBP3-221	ENST00000600610	PLEKHH2	Q8IVE3	1493 aa		32.1	■■■□□ 2.73
GTPBP3-221	ENST00000600610	MYOM3	Q5VTT5	1437 aa		32.09	■■■□□ 2.73
GTPBP3-221	ENST00000600610	MIA2	Q96PC5	1412 aa		32.09	■■■□□ 2.73
GTPBP3-221	ENST00000600610	POGZ	Q7Z3K3	1410 aa		32.04	■■■□□ 2.72
GTPBP3-221	ENST00000600610	KIAA1107	Q9UPP5	1409 aa		32.04	■■■□□ 2.72
GTPBP3-221	ENST00000600610	ZMYM4	Q5VZL5	1548 aa		32.04	■■■□□ 2.72
GTPBP3-221	ENST00000600610	SAMD9L	Q8IVG5	1584 aa		32.02	■■■□□ 2.72
GTPBP3-221	ENST00000600610	ABCC1	P33527	1531 aa		32.02	■■■□□ 2.72
GTPBP3-221	ENST00000600610	MAGI2	Q86UL8	1455 aa		32.02	■■■□□ 2.72
GTPBP3-221	ENST00000600610	AEBP2	Q6ZN18	517 aa	Predicted RBP	31.99	■■■□□ 2.71
GTPBP3-221	ENST00000600610	ZNF518A	Q6AHZ1	1483 aa		31.98	■■■□□ 2.71
GTPBP3-221	ENST00000600610	KDM4F	A0A1W2PPD8	638 aa		31.97	■■■□□ 2.71
GTPBP3-221	ENST00000600610	RSPH4A	Q5TD94	716 aa		31.96	■■■□□ 2.71
GTPBP3-221	ENST00000600610	ZNF777	Q9ULD5	760 aa	Predicted RBP	31.96	■■■□□ 2.71
GTPBP3-221	ENST00000600610	ARHGEF40	Q8TER5	1519 aa		31.94	■■■□□ 2.7
GTPBP3-221	ENST00000600610	FGD6	Q6ZV73	1430 aa		31.92	■■■□□ 2.7
GTPBP3-221	ENST00000600610	CAMSAP2	Q08AD1	1489 aa		31.91	■■■□□ 2.7
GTPBP3-221	ENST00000600610	ZFYVE16	Q7Z3T8	1539 aa		31.91	■■■□□ 2.7
GTPBP3-221	ENST00000600610	KDM5C	P41229	1560 aa		31.91	■■■□□ 2.7
GTPBP3-221	ENST00000600610	AFAP1	Q8N556	730 aa		31.9	■■■□□ 2.7
GTPBP3-221	ENST00000600610	ARHGEF12	Q9NZN5	1544 aa		31.9	■■■□□ 2.7
GTPBP3-221	ENST00000600610	SYCP2	Q9BX26	1530 aa		31.89	■■■□□ 2.7
GTPBP3-221	ENST00000600610	PTPN23	Q9H3S7	1636 aa		31.89	■■■□□ 2.7
GTPBP3-221	ENST00000600610	ARHGEF5	Q12774	1597 aa		31.87	■■■□□ 2.69
GTPBP3-221	ENST00000600610	TCOF1	Q13428	1488 aa	Known RBP	31.87	■■■□□ 2.69
GTPBP3-221	ENST00000600610	MBD5	Q9P267	1494 aa		31.85	■■■□□ 2.69
GTPBP3-221	ENST00000600610	YEATS2	Q9ULM3	1422 aa		31.85	■■■□□ 2.69
GTPBP3-221	ENST00000600610	TRAPPC8	Q9Y2L5	1435 aa		31.85	■■■□□ 2.69
GTPBP3-221	ENST00000600610	ZNF644	Q9H582	1327 aa	Predicted RBP	31.84	■■■□□ 2.69
GTPBP3-221	ENST00000600610	MLH3	Q9UHC1	1453 aa		31.84	■■■□□ 2.69
GTPBP3-221	ENST00000600610	HECW2	Q9P2P5	1572 aa		31.82	■■■□□ 2.68
GTPBP3-221	ENST00000600610	HNRNPM	P52272	730 aa	Known RBP eCLIP	31.82	■■■□□ 2.68
GTPBP3-221	ENST00000600610	ATP10A	O60312	1499 aa		31.8	■■■□□ 2.68
GTPBP3-221	ENST00000600610	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	31.79	■■■□□ 2.68
GTPBP3-221	ENST00000600610	CCDC141	Q6ZP82	1450 aa		31.78	■■■□□ 2.68
GTPBP3-221	ENST00000600610	PPARGC1B	Q86YN6	1023 aa	Known RBP	31.78	■■■□□ 2.68
GTPBP3-221	ENST00000600610	MYT1L	Q9UL68	1186 aa		31.77	■■■□□ 2.68
GTPBP3-221	ENST00000600610	ARID4B	Q4LE39	1312 aa	Predicted RBP	31.76	■■■□□ 2.68
GTPBP3-221	ENST00000600610	RTEL1-TNFRSF6B	F6WH68	1400 aa		31.75	■■■□□ 2.67
GTPBP3-221	ENST00000600610	C9orf84	Q5VXU9	1444 aa		31.75	■■■□□ 2.67
GTPBP3-221	ENST00000600610	BCORL1	Q5H9F3	1711 aa		31.74	■■■□□ 2.67
GTPBP3-221	ENST00000600610	KIDINS220	Q9ULH0	1771 aa		31.72	■■■□□ 2.67
GTPBP3-221	ENST00000600610	TSPY4	P0CV99	314 aa		31.72	■■■□□ 2.67
GTPBP3-221	ENST00000600610	TSPY10	P0CW01	314 aa		31.72	■■■□□ 2.67
GTPBP3-221	ENST00000600610	SPAG9	O60271	1321 aa	Known RBP	31.72	■■■□□ 2.67
GTPBP3-221	ENST00000600610	DNMT1	P26358	1616 aa	Known RBP	31.71	■■■□□ 2.67
GTPBP3-221	ENST00000600610	ADAMTSL3	P82987	1691 aa		31.71	■■■□□ 2.67
GTPBP3-221	ENST00000600610	RRBP1	Q9P2E9	1410 aa	Known RBP	31.71	■■■□□ 2.67
GTPBP3-221	ENST00000600610	INO80	Q9ULG1	1556 aa	Predicted RBP	31.7	■■■□□ 2.67
GTPBP3-221	ENST00000600610	DIP2C	Q9Y2E4	1556 aa		31.7	■■■□□ 2.67
GTPBP3-221	ENST00000600610	MAST1	Q9Y2H9	1570 aa		31.7	■■■□□ 2.67
GTPBP3-221	ENST00000600610	RERE	Q9P2R6	1566 aa		31.69	■■■□□ 2.66
GTPBP3-221	ENST00000600610	CROCC2	H7BZ55	1655 aa		31.68	■■■□□ 2.66
GTPBP3-221	ENST00000600610	ATP7A	Q04656	1500 aa		31.68	■■■□□ 2.66
GTPBP3-221	ENST00000600610	ABCA6	Q8N139	1617 aa		31.67	■■■□□ 2.66
GTPBP3-221	ENST00000600610	SIGLEC1	Q9BZZ2	1709 aa		31.67	■■■□□ 2.66
GTPBP3-221	ENST00000600610	SHANK2	Q9UPX8	1470 aa		31.66	■■■□□ 2.66
GTPBP3-221	ENST00000600610	FAM50A	Q14320	339 aa	Known RBP	31.63	■■■□□ 2.65
GTPBP3-221	ENST00000600610	DAPK1	P53355	1430 aa		31.63	■■■□□ 2.65
GTPBP3-221	ENST00000600610	ABCC5	O15440	1437 aa		31.62	■■■□□ 2.65
GTPBP3-221	ENST00000600610	ADGB	Q8N7X0	1667 aa		31.62	■■■□□ 2.65
GTPBP3-221	ENST00000600610	AGL	P35573	1532 aa		31.58	■■■□□ 2.65
GTPBP3-221	ENST00000600610	MADD	Q8WXG6	1647 aa		31.57	■■■□□ 2.64
GTPBP3-221	ENST00000600610	PLXNC1	O60486	1568 aa		31.56	■■■□□ 2.64
GTPBP3-221	ENST00000600610	PTPRM	P28827	1452 aa		31.52	■■■□□ 2.64
GTPBP3-221	ENST00000600610	MLEC	Q14165	292 aa		31.51	■■■□□ 2.63
GTPBP3-221	ENST00000600610	ADGRL2	O95490	1459 aa		31.49	■■■□□ 2.63
GTPBP3-221	ENST00000600610	FER1L4	A9Z1Z3	1794 aa		31.48	■■■□□ 2.63
GTPBP3-221	ENST00000600610	A2M	P01023	1474 aa		31.48	■■■□□ 2.63
GTPBP3-221	ENST00000600610	ANKRD30A	Q9BXX3	1397 aa		31.48	■■■□□ 2.63
GTPBP3-221	ENST00000600610	RIMS1	Q86UR5	1692 aa	Known RBP	31.48	■■■□□ 2.63
GTPBP3-221	ENST00000600610	DHX29	Q7Z478	1369 aa	Known RBP	31.46	■■■□□ 2.63
GTPBP3-221	ENST00000600610	ROCK1	Q13464	1354 aa		31.44	■■■□□ 2.62
GTPBP3-221	ENST00000600610	NCOA1	Q15788	1441 aa		31.43	■■■□□ 2.62
GTPBP3-221	ENST00000600610	DUOX2	Q9NRD8	1548 aa		31.43	■■■□□ 2.62
GTPBP3-221	ENST00000600610	EIF2AK4	Q9P2K8	1649 aa	Known RBP	31.38	■■■□□ 2.61
GTPBP3-221	ENST00000600610	KIF15	Q9NS87	1388 aa		31.37	■■■□□ 2.61
GTPBP3-221	ENST00000600610	PTPRK	Q15262	1439 aa		31.37	■■■□□ 2.61
GTPBP3-221	ENST00000600610	CHIC2	Q9UKJ5	165 aa		31.36	■■■□□ 2.61
GTPBP3-221	ENST00000600610	ERBIN	Q96RT1	1412 aa		31.34	■■■□□ 2.61
GTPBP3-221	ENST00000600610	ESF1	Q9H501	851 aa	Known RBP	31.34	■■■□□ 2.61
GTPBP3-221	ENST00000600610	PPP6R1	Q9UPN7	881 aa		31.33	■■■□□ 2.61
GTPBP3-221	ENST00000600610	RRP7BP	Q9NSQ0	103 aa		31.31	■■■□□ 2.6
GTPBP3-221	ENST00000600610	CNTLN	Q9NXG0	1405 aa		31.31	■■■□□ 2.6
GTPBP3-221	ENST00000600610	ITGAE	P38570	1179 aa		31.29	■■■□□ 2.6

Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms