RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-223ENST00000600523 CFDP1Q9UEE9 299 aaPredicted RBP20.28■□□□□ 0.84
SRRM1-223ENST00000600523 ADGRL1O94910 1474 aa20.28■□□□□ 0.84
SRRM1-223ENST00000600523 PREX2Q70Z35 1606 aa20.27■□□□□ 0.84
SRRM1-223ENST00000600523 DENND4BO75064 1496 aaPredicted RBP20.27■□□□□ 0.84
SRRM1-223ENST00000600523 COL17A1Q9UMD9 1497 aaPredicted RBP20.27■□□□□ 0.84
SRRM1-223ENST00000600523 ZNF777Q9ULD5 760 aaPredicted RBP20.25■□□□□ 0.83
SRRM1-223ENST00000600523 GPATCH8Q9UKJ3 1502 aaKnown RBP20.25■□□□□ 0.83
SRRM1-223ENST00000600523 NCOA2Q15596 1464 aa20.24■□□□□ 0.83
SRRM1-223ENST00000600523 SCAPERQ9BY12 1400 aa20.24■□□□□ 0.83
SRRM1-223ENST00000600523 RAPGEF3O95398 923 aa20.23■□□□□ 0.83
SRRM1-223ENST00000600523 KANK4Q5T7N3 995 aaPredicted RBP20.23■□□□□ 0.83
SRRM1-223ENST00000600523 CDC42BPAQ5VT25 1732 aa20.23■□□□□ 0.83
SRRM1-223ENST00000600523 ITSN2Q9NZM3 1697 aa20.22■□□□□ 0.83
SRRM1-223ENST00000600523 CDC42BPBQ9Y5S2 1711 aa20.22■□□□□ 0.83
SRRM1-223ENST00000600523 PLEKHH2Q8IVE3 1493 aa20.2■□□□□ 0.82
SRRM1-223ENST00000600523 MYT1LQ9UL68 1186 aa20.18■□□□□ 0.82
SRRM1-223ENST00000600523 POGZQ7Z3K3 1410 aa20.18■□□□□ 0.82
SRRM1-223ENST00000600523 ZNF518AQ6AHZ1 1483 aa20.18■□□□□ 0.82
SRRM1-223ENST00000600523 ABCC1P33527 1531 aa20.14■□□□□ 0.81
SRRM1-223ENST00000600523 RICTORQ6R327 1708 aa20.13■□□□□ 0.81
SRRM1-223ENST00000600523 MAGI2Q86UL8 1455 aa20.13■□□□□ 0.81
SRRM1-223ENST00000600523 KIAA1107Q9UPP5 1409 aa20.13■□□□□ 0.81
SRRM1-223ENST00000600523 SAMD9LQ8IVG5 1584 aa20.12■□□□□ 0.81
SRRM1-223ENST00000600523 MYOM3Q5VTT5 1437 aa20.11■□□□□ 0.81
SRRM1-223ENST00000600523 FRMPD1Q5SYB0 1578 aa20.11■□□□□ 0.81
SRRM1-223ENST00000600523 ZMYM4Q5VZL5 1548 aa20.11■□□□□ 0.81
SRRM1-223ENST00000600523 RSPH4AQ5TD94 716 aa20.1■□□□□ 0.81
SRRM1-223ENST00000600523 AFAP1Q8N556 730 aa20.1■□□□□ 0.81
SRRM1-223ENST00000600523 MIA2Q96PC5 1412 aa20.1■□□□□ 0.81
SRRM1-223ENST00000600523 SYCP2Q9BX26 1530 aa20.09■□□□□ 0.81
SRRM1-223ENST00000600523 HNRNPMP52272 730 aaKnown RBP eCLIP20.09■□□□□ 0.81
SRRM1-223ENST00000600523 ZFYVE16Q7Z3T8 1539 aa20.07■□□□□ 0.8
SRRM1-223ENST00000600523 ZNF644Q9H582 1327 aaPredicted RBP20.06■□□□□ 0.8
SRRM1-223ENST00000600523 TRAPPC8Q9Y2L5 1435 aa20.06■□□□□ 0.8
SRRM1-223ENST00000600523 CAMSAP2Q08AD1 1489 aa20.05■□□□□ 0.8
SRRM1-223ENST00000600523 SPAG9O60271 1321 aaKnown RBP20.05■□□□□ 0.8
SRRM1-223ENST00000600523 KDM5CP41229 1560 aa20.05■□□□□ 0.8
SRRM1-223ENST00000600523 ARHGEF40Q8TER5 1519 aa20.05■□□□□ 0.8
SRRM1-223ENST00000600523 ARHGEF12Q9NZN5 1544 aa20.05■□□□□ 0.8
SRRM1-223ENST00000600523 ARID4BQ4LE39 1312 aaPredicted RBP20.04■□□□□ 0.8
SRRM1-223ENST00000600523 HECW2Q9P2P5 1572 aa20.04■□□□□ 0.8
SRRM1-223ENST00000600523 MLH3Q9UHC1 1453 aa20.03■□□□□ 0.8
SRRM1-223ENST00000600523 TSPY4P0CV99 314 aa20.02■□□□□ 0.8
SRRM1-223ENST00000600523 TSPY10P0CW01 314 aa20.02■□□□□ 0.8
SRRM1-223ENST00000600523 ATP10AO60312 1499 aa20■□□□□ 0.79
SRRM1-223ENST00000600523 CCDC141Q6ZP82 1450 aa20■□□□□ 0.79
SRRM1-223ENST00000600523 FGD6Q6ZV73 1430 aa20■□□□□ 0.79
SRRM1-223ENST00000600523 YEATS2Q9ULM3 1422 aa20■□□□□ 0.79
SRRM1-223ENST00000600523 MBD5Q9P267 1494 aa19.99■□□□□ 0.79
SRRM1-223ENST00000600523 PPARGC1BQ86YN6 1023 aaKnown RBP19.98■□□□□ 0.79
SRRM1-223ENST00000600523 C9orf84Q5VXU9 1444 aa19.98■□□□□ 0.79
SRRM1-223ENST00000600523 ARHGEF5Q12774 1597 aa19.96■□□□□ 0.79
SRRM1-223ENST00000600523 PTPN23Q9H3S7 1636 aa19.96■□□□□ 0.79
SRRM1-223ENST00000600523 FAM50AQ14320 339 aaKnown RBP19.95■□□□□ 0.78
SRRM1-223ENST00000600523 AEBP2Q6ZN18 517 aaPredicted RBP19.95■□□□□ 0.78
SRRM1-223ENST00000600523 ATP7AQ04656 1500 aa19.95■□□□□ 0.78
SRRM1-223ENST00000600523 RTEL1-TNFRSF6BF6WH68 1400 aa19.94■□□□□ 0.78
SRRM1-223ENST00000600523 TCOF1Q13428 1488 aaKnown RBP19.92■□□□□ 0.78
SRRM1-223ENST00000600523 INO80Q9ULG1 1556 aaPredicted RBP19.91■□□□□ 0.78
SRRM1-223ENST00000600523 DIP2CQ9Y2E4 1556 aa19.91■□□□□ 0.78
SRRM1-223ENST00000600523 KIDINS220Q9ULH0 1771 aa19.91■□□□□ 0.78
SRRM1-223ENST00000600523 ABCA6Q8N139 1617 aa19.9■□□□□ 0.78
SRRM1-223ENST00000600523 REREQ9P2R6 1566 aa19.89■□□□□ 0.77
SRRM1-223ENST00000600523 KDM4FA0A1W2PPD8 638 aa19.88■□□□□ 0.77
SRRM1-223ENST00000600523 MLECQ14165 292 aa19.87■□□□□ 0.77
SRRM1-223ENST00000600523 ESF1Q9H501 851 aaKnown RBP19.87■□□□□ 0.77
SRRM1-223ENST00000600523 A2MP01023 1474 aa19.86■□□□□ 0.77
SRRM1-223ENST00000600523 SHANK2Q9UPX8 1470 aa19.85■□□□□ 0.77
SRRM1-223ENST00000600523 DAPK1P53355 1430 aa19.85■□□□□ 0.77
SRRM1-223ENST00000600523 ADGBQ8N7X0 1667 aa19.84■□□□□ 0.77
SRRM1-223ENST00000600523 MAST1Q9Y2H9 1570 aa19.84■□□□□ 0.77
SRRM1-223ENST00000600523 DNMT1P26358 1616 aaKnown RBP19.84■□□□□ 0.77
SRRM1-223ENST00000600523 AGLP35573 1532 aa19.83■□□□□ 0.77
SRRM1-223ENST00000600523 BCORL1Q5H9F3 1711 aa19.83■□□□□ 0.77
SRRM1-223ENST00000600523 ABCC5O15440 1437 aa19.83■□□□□ 0.76
SRRM1-223ENST00000600523 DHX29Q7Z478 1369 aaKnown RBP19.82■□□□□ 0.76
SRRM1-223ENST00000600523 ANKRD30AQ9BXX3 1397 aa19.81■□□□□ 0.76
SRRM1-223ENST00000600523 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.81■□□□□ 0.76
SRRM1-223ENST00000600523 CROCC2H7BZ55 1655 aa19.79■□□□□ 0.76
SRRM1-223ENST00000600523 CHIC2Q9UKJ5 165 aa19.78■□□□□ 0.76
SRRM1-223ENST00000600523 ADAMTSL3P82987 1691 aa19.78■□□□□ 0.76
SRRM1-223ENST00000600523 PLXNC1O60486 1568 aa19.77■□□□□ 0.76
SRRM1-223ENST00000600523 KIF15Q9NS87 1388 aa19.76■□□□□ 0.75
SRRM1-223ENST00000600523 KIF3BO15066 747 aa19.76■□□□□ 0.75
SRRM1-223ENST00000600523 ITGAEP38570 1179 aa19.76■□□□□ 0.75
SRRM1-223ENST00000600523 RRP7BPQ9NSQ0 103 aa19.76■□□□□ 0.75
SRRM1-223ENST00000600523 RRBP1Q9P2E9 1410 aaKnown RBP19.76■□□□□ 0.75
SRRM1-223ENST00000600523 GGT6Q6P531 493 aa19.75■□□□□ 0.75
SRRM1-223ENST00000600523 PPP6R1Q9UPN7 881 aa19.75■□□□□ 0.75
SRRM1-223ENST00000600523 SIGLEC1Q9BZZ2 1709 aa19.75■□□□□ 0.75
SRRM1-223ENST00000600523 MADDQ8WXG6 1647 aa19.75■□□□□ 0.75
SRRM1-223ENST00000600523 DUOX2Q9NRD8 1548 aa19.74■□□□□ 0.75
SRRM1-223ENST00000600523 CNTLNQ9NXG0 1405 aa19.72■□□□□ 0.75
SRRM1-223ENST00000600523 FER1L4A9Z1Z3 1794 aa19.72■□□□□ 0.75
SRRM1-223ENST00000600523 PTPRMP28827 1452 aa19.72■□□□□ 0.75
SRRM1-223ENST00000600523 NCOA1Q15788 1441 aa19.71■□□□□ 0.75
SRRM1-223ENST00000600523 ADGRL2O95490 1459 aa19.7■□□□□ 0.74
SRRM1-223ENST00000600523 RIMS1Q86UR5 1692 aaKnown RBP19.7■□□□□ 0.74
SRRM1-223ENST00000600523 ERBINQ96RT1 1412 aa19.69■□□□□ 0.74
SRRM1-223ENST00000600523 PLPPR3Q6T4P5 718 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms