RNA–Protein interactions for RNA: ENST00000600341.5

USF2-213, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 2

Gene USF2, Length 1,392 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-213ENST00000600341 GPATCH8Q9UKJ3 1502 aaKnown RBP28.3■■■□□ 2.12
USF2-213ENST00000600341 APLP2Q06481 763 aa28.3■■■□□ 2.12
USF2-213ENST00000600341 PHLDB1Q86UU1 1377 aa28.3■■■□□ 2.12
USF2-213ENST00000600341 NCOA2Q15596 1464 aa28.29■■■□□ 2.12
USF2-213ENST00000600341 SUPT6HQ7KZ85 1726 aaKnown RBP28.29■■■□□ 2.12
USF2-213ENST00000600341 CCNB3Q8WWL7 1395 aa28.27■■■□□ 2.12
USF2-213ENST00000600341 EFCAB2Q5VUJ9 269 aa28.26■■■□□ 2.12
USF2-213ENST00000600341 ADGRL1O94910 1474 aa28.22■■■□□ 2.11
USF2-213ENST00000600341 FRMPD1Q5SYB0 1578 aa28.22■■■□□ 2.11
USF2-213ENST00000600341 RAPGEF3O95398 923 aa28.21■■■□□ 2.11
USF2-213ENST00000600341 SCAPERQ9BY12 1400 aa28.19■■■□□ 2.1
USF2-213ENST00000600341 DENND4BO75064 1496 aaPredicted RBP28.19■■■□□ 2.1
USF2-213ENST00000600341 ITSN2Q9NZM3 1697 aa28.18■■■□□ 2.1
USF2-213ENST00000600341 SAMD9LQ8IVG5 1584 aa28.17■■■□□ 2.1
USF2-213ENST00000600341 CFDP1Q9UEE9 299 aaPredicted RBP28.16■■■□□ 2.1
USF2-213ENST00000600341 ABCC1P33527 1531 aa28.16■■■□□ 2.1
USF2-213ENST00000600341 RICTORQ6R327 1708 aa28.16■■■□□ 2.1
USF2-213ENST00000600341 ZNF777Q9ULD5 760 aaPredicted RBP28.15■■■□□ 2.1
USF2-213ENST00000600341 ARHGEF12Q9NZN5 1544 aa28.15■■■□□ 2.1
USF2-213ENST00000600341 POGZQ7Z3K3 1410 aa28.13■■■□□ 2.09
USF2-213ENST00000600341 ZNF644Q9H582 1327 aaPredicted RBP28.1■■■□□ 2.09
USF2-213ENST00000600341 SYCP2Q9BX26 1530 aa28.08■■■□□ 2.09
USF2-213ENST00000600341 MYOM3Q5VTT5 1437 aa28.08■■■□□ 2.09
USF2-213ENST00000600341 TRAPPC8Q9Y2L5 1435 aa28.08■■■□□ 2.09
USF2-213ENST00000600341 ZMYM4Q5VZL5 1548 aa28.06■■■□□ 2.08
USF2-213ENST00000600341 PPARGC1BQ86YN6 1023 aaKnown RBP28.04■■■□□ 2.08
USF2-213ENST00000600341 AFAP1Q8N556 730 aa28.04■■■□□ 2.08
USF2-213ENST00000600341 ZNF518AQ6AHZ1 1483 aa28.04■■■□□ 2.08
USF2-213ENST00000600341 PLEKHH2Q8IVE3 1493 aa28.03■■■□□ 2.08
USF2-213ENST00000600341 KIAA1107Q9UPP5 1409 aa28.03■■■□□ 2.08
USF2-213ENST00000600341 HNRNPMP52272 730 aaKnown RBP eCLIP28.02■■■□□ 2.088e-10■■■■□ 23.4
USF2-213ENST00000600341 CAMSAP2Q08AD1 1489 aa28.02■■■□□ 2.08
USF2-213ENST00000600341 KDM5CP41229 1560 aa28.02■■■□□ 2.08
USF2-213ENST00000600341 MIA2Q96PC5 1412 aa27.98■■■□□ 2.07
USF2-213ENST00000600341 YEATS2Q9ULM3 1422 aa27.98■■■□□ 2.07
USF2-213ENST00000600341 MBD5Q9P267 1494 aa27.98■■■□□ 2.07
USF2-213ENST00000600341 ARHGEF40Q8TER5 1519 aa27.97■■■□□ 2.07
USF2-213ENST00000600341 ZFYVE16Q7Z3T8 1539 aa27.96■■■□□ 2.07
USF2-213ENST00000600341 FGD6Q6ZV73 1430 aa27.94■■■□□ 2.06
USF2-213ENST00000600341 MAGI2Q86UL8 1455 aa27.94■■■□□ 2.06
USF2-213ENST00000600341 HECW2Q9P2P5 1572 aa27.93■■■□□ 2.06
USF2-213ENST00000600341 MLH3Q9UHC1 1453 aa27.91■■■□□ 2.06
USF2-213ENST00000600341 PTPN23Q9H3S7 1636 aa27.91■■■□□ 2.06
USF2-213ENST00000600341 CCDC141Q6ZP82 1450 aa27.88■■■□□ 2.05
USF2-213ENST00000600341 KIDINS220Q9ULH0 1771 aa27.88■■■□□ 2.05
USF2-213ENST00000600341 TCOF1Q13428 1488 aaKnown RBP27.87■■■□□ 2.05
USF2-213ENST00000600341 ARHGEF5Q12774 1597 aa27.86■■■□□ 2.05
USF2-213ENST00000600341 ABCA6Q8N139 1617 aa27.86■■■□□ 2.05
USF2-213ENST00000600341 SPAG9O60271 1321 aaKnown RBP27.86■■■□□ 2.05
USF2-213ENST00000600341 DIP2CQ9Y2E4 1556 aa27.86■■■□□ 2.05
USF2-213ENST00000600341 INO80Q9ULG1 1556 aaPredicted RBP27.85■■■□□ 2.05
USF2-213ENST00000600341 MYT1LQ9UL68 1186 aa27.85■■■□□ 2.05
USF2-213ENST00000600341 SIGLEC1Q9BZZ2 1709 aa27.84■■■□□ 2.05
USF2-213ENST00000600341 ATP7AQ04656 1500 aa27.83■■■□□ 2.05
USF2-213ENST00000600341 ATP10AO60312 1499 aa27.81■■■□□ 2.04
USF2-213ENST00000600341 C9orf84Q5VXU9 1444 aa27.79■■■□□ 2.04
USF2-213ENST00000600341 RSPH4AQ5TD94 716 aa27.78■■■□□ 2.04
USF2-213ENST00000600341 RTEL1-TNFRSF6BF6WH68 1400 aa27.75■■■□□ 2.03
USF2-213ENST00000600341 ABCC5O15440 1437 aa27.75■■■□□ 2.03
USF2-213ENST00000600341 DNMT1P26358 1616 aaKnown RBP27.74■■■□□ 2.03
USF2-213ENST00000600341 FAM50AQ14320 339 aaKnown RBP27.73■■■□□ 2.03
USF2-213ENST00000600341 REREQ9P2R6 1566 aa27.73■■■□□ 2.03
USF2-213ENST00000600341 DAPK1P53355 1430 aa27.73■■■□□ 2.03
USF2-213ENST00000600341 KDM4FA0A1W2PPD8 638 aa27.73■■■□□ 2.03
USF2-213ENST00000600341 ARID4BQ4LE39 1312 aaPredicted RBP27.72■■■□□ 2.03
USF2-213ENST00000600341 MAST1Q9Y2H9 1570 aa27.72■■■□□ 2.03
USF2-213ENST00000600341 CROCC2H7BZ55 1655 aa27.71■■■□□ 2.03
USF2-213ENST00000600341 TSPY4P0CV99 314 aa27.71■■■□□ 2.03
USF2-213ENST00000600341 TSPY10P0CW01 314 aa27.71■■■□□ 2.03
USF2-213ENST00000600341 SHANK2Q9UPX8 1470 aa27.68■■■□□ 2.02
USF2-213ENST00000600341 BCORL1Q5H9F3 1711 aa27.68■■■□□ 2.02
USF2-213ENST00000600341 ADGBQ8N7X0 1667 aa27.67■■■□□ 2.02
USF2-213ENST00000600341 PLXNC1O60486 1568 aa27.66■■■□□ 2.02
USF2-213ENST00000600341 A2MP01023 1474 aa27.66■■■□□ 2.02
USF2-213ENST00000600341 RRBP1Q9P2E9 1410 aaKnown RBP27.66■■■□□ 2.02
USF2-213ENST00000600341 AGLP35573 1532 aa27.64■■■□□ 2.01
USF2-213ENST00000600341 ADAMTSL3P82987 1691 aa27.63■■■□□ 2.01
USF2-213ENST00000600341 MLECQ14165 292 aa27.61■■■□□ 2.01
USF2-213ENST00000600341 PTPRKQ15262 1439 aa27.61■■■□□ 2.01
USF2-213ENST00000600341 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.6■■■□□ 2.01
USF2-213ENST00000600341 CHIC2Q9UKJ5 165 aa27.6■■■□□ 2.01
USF2-213ENST00000600341 DHX29Q7Z478 1369 aaKnown RBP27.59■■■□□ 2.01
USF2-213ENST00000600341 MADDQ8WXG6 1647 aa27.57■■■□□ 2
USF2-213ENST00000600341 ADGRL2O95490 1459 aa27.54■■■□□ 2
USF2-213ENST00000600341 KIF15Q9NS87 1388 aa27.53■■■□□ 2
USF2-213ENST00000600341 ITGAEP38570 1179 aa27.52■■■□□ 2
USF2-213ENST00000600341 RRP7BPQ9NSQ0 103 aa27.52■■■□□ 2
USF2-213ENST00000600341 NCOA1Q15788 1441 aa27.51■■□□□ 1.99
USF2-213ENST00000600341 ANKRD30AQ9BXX3 1397 aa27.51■■□□□ 1.99
USF2-213ENST00000600341 DUOX2Q9NRD8 1548 aa27.5■■□□□ 1.99
USF2-213ENST00000600341 RIMS1Q86UR5 1692 aaKnown RBP27.49■■□□□ 1.99
USF2-213ENST00000600341 FER1L4A9Z1Z3 1794 aa27.48■■□□□ 1.99
USF2-213ENST00000600341 KIF3BO15066 747 aa27.47■■□□□ 1.99
USF2-213ENST00000600341 PTPRMP28827 1452 aa27.44■■□□□ 1.98
USF2-213ENST00000600341 GGT6Q6P531 493 aa27.44■■□□□ 1.98
USF2-213ENST00000600341 EIF2AK4Q9P2K8 1649 aaKnown RBP27.43■■□□□ 1.98
USF2-213ENST00000600341 ERBINQ96RT1 1412 aa27.42■■□□□ 1.98
USF2-213ENST00000600341 ROCK1Q13464 1354 aa27.41■■□□□ 1.98
USF2-213ENST00000600341 AEBP2Q6ZN18 517 aaPredicted RBP27.41■■□□□ 1.98
USF2-213ENST00000600341 RNF17Q9BXT8 1623 aaKnown RBP27.39■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms