RNA–Protein interactions for RNA: ENST00000599804.5

SMG9-209, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-209ENST00000599804 PPARGC1BQ86YN6 1023 aaKnown RBP25.54■■□□□ 1.68
SMG9-209ENST00000599804 MYOM3Q5VTT5 1437 aa25.54■■□□□ 1.68
SMG9-209ENST00000599804 ARHGAP5Q13017 1502 aa25.53■■□□□ 1.68
SMG9-209ENST00000599804 PHLDB1Q86UU1 1377 aa25.51■■□□□ 1.67
SMG9-209ENST00000599804 MIA2Q96PC5 1412 aa25.5■■□□□ 1.67
SMG9-209ENST00000599804 FANCAO15360 1455 aa25.48■■□□□ 1.67
SMG9-209ENST00000599804 NEO1Q92859 1461 aa25.47■■□□□ 1.67
SMG9-209ENST00000599804 CFDP1Q9UEE9 299 aaPredicted RBP25.47■■□□□ 1.67
SMG9-209ENST00000599804 EFCAB2Q5VUJ9 269 aa25.46■■□□□ 1.67
SMG9-209ENST00000599804 FGD6Q6ZV73 1430 aa25.45■■□□□ 1.66
SMG9-209ENST00000599804 PTPN23Q9H3S7 1636 aa25.43■■□□□ 1.66
SMG9-209ENST00000599804 SAMD9LQ8IVG5 1584 aa25.42■■□□□ 1.66
SMG9-209ENST00000599804 PLEKHH2Q8IVE3 1493 aa25.41■■□□□ 1.66
SMG9-209ENST00000599804 AKNAQ7Z591 1439 aa25.39■■□□□ 1.66
SMG9-209ENST00000599804 ABCC1P33527 1531 aa25.38■■□□□ 1.65
SMG9-209ENST00000599804 CAMSAP2Q08AD1 1489 aa25.38■■□□□ 1.65
SMG9-209ENST00000599804 TCOF1Q13428 1488 aaKnown RBP25.38■■□□□ 1.65
SMG9-209ENST00000599804 RRBP1Q9P2E9 1410 aaKnown RBP25.37■■□□□ 1.65
SMG9-209ENST00000599804 ADGRL1O94910 1474 aa25.36■■□□□ 1.65
SMG9-209ENST00000599804 ZNF777Q9ULD5 760 aaPredicted RBP25.35■■□□□ 1.65
SMG9-209ENST00000599804 KIAA1107Q9UPP5 1409 aa25.35■■□□□ 1.65
SMG9-209ENST00000599804 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.32■■□□□ 1.64
SMG9-209ENST00000599804 SYCP2Q9BX26 1530 aa25.32■■□□□ 1.64
SMG9-209ENST00000599804 ARHGEF5Q12774 1597 aa25.31■■□□□ 1.64
SMG9-209ENST00000599804 RICTORQ6R327 1708 aa25.29■■□□□ 1.64
SMG9-209ENST00000599804 SCAPERQ9BY12 1400 aa25.29■■□□□ 1.64
SMG9-209ENST00000599804 ZNF644Q9H582 1327 aaPredicted RBP25.28■■□□□ 1.64
SMG9-209ENST00000599804 DENND4BO75064 1496 aaPredicted RBP25.28■■□□□ 1.64
SMG9-209ENST00000599804 KDM6BO15054 1643 aa25.26■■□□□ 1.63
SMG9-209ENST00000599804 DNMT1P26358 1616 aaKnown RBP25.26■■□□□ 1.63
SMG9-209ENST00000599804 RSPH4AQ5TD94 716 aa25.26■■□□□ 1.63
SMG9-209ENST00000599804 ARHGEF12Q9NZN5 1544 aa25.26■■□□□ 1.63
SMG9-209ENST00000599804 ZNF518AQ6AHZ1 1483 aa25.25■■□□□ 1.63
SMG9-209ENST00000599804 MBD5Q9P267 1494 aa25.25■■□□□ 1.63
SMG9-209ENST00000599804 CROCC2H7BZ55 1655 aa25.25■■□□□ 1.63
SMG9-209ENST00000599804 CCDC141Q6ZP82 1450 aa25.24■■□□□ 1.63
SMG9-209ENST00000599804 POGZQ7Z3K3 1410 aa25.24■■□□□ 1.63
SMG9-209ENST00000599804 FAM50AQ14320 339 aaKnown RBP25.24■■□□□ 1.63
SMG9-209ENST00000599804 HNRNPMP52272 730 aaKnown RBP eCLIP25.21■■□□□ 1.63
SMG9-209ENST00000599804 KDM5CP41229 1560 aa25.21■■□□□ 1.63
SMG9-209ENST00000599804 FRMPD1Q5SYB0 1578 aa25.2■■□□□ 1.62
SMG9-209ENST00000599804 TRAPPC8Q9Y2L5 1435 aa25.19■■□□□ 1.62
SMG9-209ENST00000599804 ZMYM4Q5VZL5 1548 aa25.18■■□□□ 1.62
SMG9-209ENST00000599804 DAPK1P53355 1430 aa25.18■■□□□ 1.62
SMG9-209ENST00000599804 COL17A1Q9UMD9 1497 aaPredicted RBP25.17■■□□□ 1.62
SMG9-209ENST00000599804 SHANK2Q9UPX8 1470 aa25.17■■□□□ 1.62
SMG9-209ENST00000599804 MAST1Q9Y2H9 1570 aa25.17■■□□□ 1.62
SMG9-209ENST00000599804 HECW2Q9P2P5 1572 aa25.15■■□□□ 1.62
SMG9-209ENST00000599804 ADGBQ8N7X0 1667 aa25.14■■□□□ 1.62
SMG9-209ENST00000599804 ABCC5O15440 1437 aa25.14■■□□□ 1.62
SMG9-209ENST00000599804 INO80Q9ULG1 1556 aaPredicted RBP25.14■■□□□ 1.61
SMG9-209ENST00000599804 RAPGEF3O95398 923 aa25.13■■□□□ 1.61
SMG9-209ENST00000599804 TSPY4P0CV99 314 aa25.13■■□□□ 1.61
SMG9-209ENST00000599804 TSPY10P0CW01 314 aa25.13■■□□□ 1.61
SMG9-209ENST00000599804 AFAP1Q8N556 730 aa25.12■■□□□ 1.61
SMG9-209ENST00000599804 MAGI2Q86UL8 1455 aa25.12■■□□□ 1.61
SMG9-209ENST00000599804 MLH3Q9UHC1 1453 aa25.11■■□□□ 1.61
SMG9-209ENST00000599804 RTEL1-TNFRSF6BF6WH68 1400 aa25.11■■□□□ 1.61
SMG9-209ENST00000599804 KIDINS220Q9ULH0 1771 aa25.1■■□□□ 1.61
SMG9-209ENST00000599804 ATP7AQ04656 1500 aa25.1■■□□□ 1.61
SMG9-209ENST00000599804 ZFYVE16Q7Z3T8 1539 aa25.1■■□□□ 1.61
SMG9-209ENST00000599804 C9orf84Q5VXU9 1444 aa25.09■■□□□ 1.61
SMG9-209ENST00000599804 SPAG9O60271 1321 aaKnown RBP25.09■■□□□ 1.61
SMG9-209ENST00000599804 PLXNC1O60486 1568 aa25.07■■□□□ 1.6
SMG9-209ENST00000599804 TRIM26Q12899 539 aaPredicted RBP25.06■■□□□ 1.6
SMG9-209ENST00000599804 ADGRL2O95490 1459 aa25.05■■□□□ 1.6
SMG9-209ENST00000599804 ARHGEF40Q8TER5 1519 aa25.03■■□□□ 1.6
SMG9-209ENST00000599804 PTPRKQ15262 1439 aa25.03■■□□□ 1.6
SMG9-209ENST00000599804 ITGAEP38570 1179 aa25.02■■□□□ 1.6
SMG9-209ENST00000599804 ROCK1Q13464 1354 aa25.02■■□□□ 1.6
SMG9-209ENST00000599804 ABCA6Q8N139 1617 aa25.01■■□□□ 1.59
SMG9-209ENST00000599804 MYT1LQ9UL68 1186 aa25.01■■□□□ 1.59
SMG9-209ENST00000599804 ANKRD30AQ9BXX3 1397 aa25■■□□□ 1.59
SMG9-209ENST00000599804 DIP2CQ9Y2E4 1556 aa25■■□□□ 1.59
SMG9-209ENST00000599804 NCOA1Q15788 1441 aa24.97■■□□□ 1.59
SMG9-209ENST00000599804 CHIC2Q9UKJ5 165 aa24.96■■□□□ 1.59
SMG9-209ENST00000599804 REREQ9P2R6 1566 aa24.96■■□□□ 1.59
SMG9-209ENST00000599804 YEATS2Q9ULM3 1422 aa24.95■■□□□ 1.59
SMG9-209ENST00000599804 GCC2Q8IWJ2 1684 aa24.95■■□□□ 1.58
SMG9-209ENST00000599804 DUOX2Q9NRD8 1548 aa24.94■■□□□ 1.58
SMG9-209ENST00000599804 ATP10AO60312 1499 aa24.94■■□□□ 1.58
SMG9-209ENST00000599804 KIF15Q9NS87 1388 aa24.92■■□□□ 1.58
SMG9-209ENST00000599804 A2MP01023 1474 aa24.9■■□□□ 1.58
SMG9-209ENST00000599804 EIF2AK4Q9P2K8 1649 aaKnown RBP24.9■■□□□ 1.58
SMG9-209ENST00000599804 HFM1A2PYH4 1435 aa24.89■■□□□ 1.58
SMG9-209ENST00000599804 RRP7BPQ9NSQ0 103 aa24.88■■□□□ 1.57
SMG9-209ENST00000599804 ERBINQ96RT1 1412 aa24.87■■□□□ 1.57
SMG9-209ENST00000599804 BCORL1Q5H9F3 1711 aa24.87■■□□□ 1.57
SMG9-209ENST00000599804 DHX29Q7Z478 1369 aaKnown RBP24.87■■□□□ 1.57
SMG9-209ENST00000599804 NAIPQ13075 1403 aa24.85■■□□□ 1.57
SMG9-209ENST00000599804 AGLP35573 1532 aa24.84■■□□□ 1.57
SMG9-209ENST00000599804 ANKRD50Q9ULJ7 1429 aa24.83■■□□□ 1.57
SMG9-209ENST00000599804 SIGLEC1Q9BZZ2 1709 aa24.81■■□□□ 1.56
SMG9-209ENST00000599804 SETD5Q9C0A6 1442 aa24.78■■□□□ 1.56
SMG9-209ENST00000599804 RNF17Q9BXT8 1623 aaKnown RBP24.77■■□□□ 1.56
SMG9-209ENST00000599804 DEPDC5O75140 1603 aa24.76■■□□□ 1.55
SMG9-209ENST00000599804 ACIN1Q9UKV3 1341 aaKnown RBP24.74■■□□□ 1.55
SMG9-209ENST00000599804 UNC13BO14795 1591 aa24.73■■□□□ 1.55
SMG9-209ENST00000599804 PCGF6Q9BYE7 350 aa24.73■■□□□ 1.55
SMG9-209ENST00000599804 KIF3BO15066 747 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms