RNA–Protein interactions for RNA: ENST00000599689.1

SHD-204, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

TSL 5 BASIC

Gene SHD, Length 1,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-204ENST00000599689 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP34.41■■■■□ 3.1
SHD-204ENST00000599689 ARAP3Q8WWN8 1544 aa34.41■■■■□ 3.1
SHD-204ENST00000599689 NEO1Q92859 1461 aa34.41■■■■□ 3.1
SHD-204ENST00000599689 MYOM3Q5VTT5 1437 aa34.4■■■■□ 3.1
SHD-204ENST00000599689 ITGAEP38570 1179 aa34.39■■■■□ 3.1
SHD-204ENST00000599689 AEBP2Q6ZN18 517 aaPredicted RBP34.38■■■■□ 3.09
SHD-204ENST00000599689 TROQ12816 1431 aaPredicted RBP34.34■■■■□ 3.09
SHD-204ENST00000599689 TTC37Q6PGP7 1564 aa34.33■■■■□ 3.09
SHD-204ENST00000599689 FANCAO15360 1455 aa34.28■■■■□ 3.08
SHD-204ENST00000599689 PLCH2O75038 1416 aa34.26■■■■□ 3.07
SHD-204ENST00000599689 PTPN23Q9H3S7 1636 aa34.26■■■■□ 3.07
SHD-204ENST00000599689 AKNAQ7Z591 1439 aa34.24■■■■□ 3.07
SHD-204ENST00000599689 RAPGEF3O95398 923 aa34.24■■■■□ 3.07
SHD-204ENST00000599689 KIF14Q15058 1648 aa34.23■■■■□ 3.07
SHD-204ENST00000599689 CFAP74Q9C0B2 1584 aa34.21■■■■□ 3.07
SHD-204ENST00000599689 KDM4FA0A1W2PPD8 638 aa34.21■■■■□ 3.07
SHD-204ENST00000599689 SETD5Q9C0A6 1442 aa34.2■■■■□ 3.06
SHD-204ENST00000599689 TCOF1Q13428 1488 aaKnown RBP34.19■■■■□ 3.06
SHD-204ENST00000599689 DHX57Q6P158 1386 aaKnown RBP34.19■■■■□ 3.06
SHD-204ENST00000599689 MIA2Q96PC5 1412 aa34.18■■■■□ 3.06
SHD-204ENST00000599689 DENND4BO75064 1496 aaPredicted RBP34.16■■■■□ 3.06
SHD-204ENST00000599689 RAB3GAP2Q9H2M9 1393 aa34.16■■■■□ 3.06
SHD-204ENST00000599689 EFCAB2Q5VUJ9 269 aa34.15■■■■□ 3.06
SHD-204ENST00000599689 CLSPNQ9HAW4 1339 aa34.13■■■■□ 3.05
SHD-204ENST00000599689 FRMPD1Q5SYB0 1578 aa34.11■■■■□ 3.05
SHD-204ENST00000599689 MYO5CQ9NQX4 1742 aa34.1■■■■□ 3.05
SHD-204ENST00000599689 ADGRL1O94910 1474 aa34.08■■■■□ 3.05
SHD-204ENST00000599689 PTPRKQ15262 1439 aa34.07■■■■□ 3.04
SHD-204ENST00000599689 SCAPERQ9BY12 1400 aa34.05■■■■□ 3.04
SHD-204ENST00000599689 ARHGAP5Q13017 1502 aa34.04■■■■□ 3.04
SHD-204ENST00000599689 RICTORQ6R327 1708 aa34.01■■■■□ 3.04
SHD-204ENST00000599689 ITSN2Q9NZM3 1697 aa34.01■■■■□ 3.04
SHD-204ENST00000599689 POGZQ7Z3K3 1410 aa33.99■■■■□ 3.03
SHD-204ENST00000599689 HFM1A2PYH4 1435 aa33.97■■■■□ 3.03
SHD-204ENST00000599689 ZMYM4Q5VZL5 1548 aa33.96■■■■□ 3.03
SHD-204ENST00000599689 MAGI2Q86UL8 1455 aa33.93■■■■□ 3.02
SHD-204ENST00000599689 GPATCH8Q9UKJ3 1502 aaKnown RBP33.93■■■■□ 3.02
SHD-204ENST00000599689 PREX2Q70Z35 1606 aa33.93■■■■□ 3.02
SHD-204ENST00000599689 CDC42BPBQ9Y5S2 1711 aa33.92■■■■□ 3.02
SHD-204ENST00000599689 ARHGEF40Q8TER5 1519 aa33.91■■■■□ 3.02
SHD-204ENST00000599689 ZNF518AQ6AHZ1 1483 aa33.88■■■■□ 3.01
SHD-204ENST00000599689 NAIPQ13075 1403 aa33.87■■■■□ 3.01
SHD-204ENST00000599689 DNMT1P26358 1616 aaKnown RBP33.87■■■■□ 3.01
SHD-204ENST00000599689 CDC42BPAQ5VT25 1732 aa33.87■■■■□ 3.01
SHD-204ENST00000599689 ZFYVE16Q7Z3T8 1539 aa33.86■■■■□ 3.01
SHD-204ENST00000599689 YEATS2Q9ULM3 1422 aa33.85■■■■□ 3.01
SHD-204ENST00000599689 AFAP1Q8N556 730 aa33.84■■■■□ 3.01
SHD-204ENST00000599689 CFDP1Q9UEE9 299 aaPredicted RBP33.84■■■■□ 3.01
SHD-204ENST00000599689 GCC2Q8IWJ2 1684 aa33.84■■■■□ 3.01
SHD-204ENST00000599689 DAPK1P53355 1430 aa33.83■■■■□ 3.01
SHD-204ENST00000599689 ARID4BQ4LE39 1312 aaPredicted RBP33.83■■■■□ 3.01
SHD-204ENST00000599689 ZNF644Q9H582 1327 aaPredicted RBP33.81■■■■□ 3
SHD-204ENST00000599689 CAMSAP2Q08AD1 1489 aa33.81■■■■□ 3
SHD-204ENST00000599689 ABCC1P33527 1531 aa33.81■■■■□ 3
SHD-204ENST00000599689 ZNF777Q9ULD5 760 aaPredicted RBP33.79■■■■□ 3
SHD-204ENST00000599689 ABCC5O15440 1437 aa33.79■■■■□ 3
SHD-204ENST00000599689 ARHGEF12Q9NZN5 1544 aa33.78■■■■□ 3
SHD-204ENST00000599689 KDM5CP41229 1560 aa33.78■■■■□ 3
SHD-204ENST00000599689 CHIC2Q9UKJ5 165 aa33.77■■■■□ 3
SHD-204ENST00000599689 TRAPPC8Q9Y2L5 1435 aa33.75■■■□□ 2.99
SHD-204ENST00000599689 ROCK1Q13464 1354 aa33.73■■■□□ 2.99
SHD-204ENST00000599689 RRP7BPQ9NSQ0 103 aa33.73■■■□□ 2.99
SHD-204ENST00000599689 ATP10AO60312 1499 aa33.73■■■□□ 2.99
SHD-204ENST00000599689 SAMD9LQ8IVG5 1584 aa33.72■■■□□ 2.99
SHD-204ENST00000599689 MYT1LQ9UL68 1186 aa33.7■■■□□ 2.99
SHD-204ENST00000599689 MLH3Q9UHC1 1453 aa33.7■■■□□ 2.99
SHD-204ENST00000599689 KIAA1107Q9UPP5 1409 aa33.69■■■□□ 2.98
SHD-204ENST00000599689 ADAMTSL3P82987 1691 aa33.69■■■□□ 2.98
SHD-204ENST00000599689 PLEKHH2Q8IVE3 1493 aa33.69■■■□□ 2.98
SHD-204ENST00000599689 C9orf84Q5VXU9 1444 aa33.69■■■□□ 2.98
SHD-204ENST00000599689 BCORL1Q5H9F3 1711 aa33.68■■■□□ 2.98
SHD-204ENST00000599689 HECW2Q9P2P5 1572 aa33.67■■■□□ 2.98
SHD-204ENST00000599689 CROCC2H7BZ55 1655 aa33.67■■■□□ 2.98
SHD-204ENST00000599689 HNRNPMP52272 730 aaKnown RBP eCLIP33.66■■■□□ 2.98
SHD-204ENST00000599689 SYCP2Q9BX26 1530 aa33.65■■■□□ 2.98
SHD-204ENST00000599689 ADGBQ8N7X0 1667 aa33.64■■■□□ 2.98
SHD-204ENST00000599689 SIGLEC1Q9BZZ2 1709 aa33.6■■■□□ 2.97
SHD-204ENST00000599689 PTPRMP28827 1452 aa33.59■■■□□ 2.97
SHD-204ENST00000599689 DIP2CQ9Y2E4 1556 aa33.59■■■□□ 2.97
SHD-204ENST00000599689 SPAG9O60271 1321 aaKnown RBP33.57■■■□□ 2.96
SHD-204ENST00000599689 MADDQ8WXG6 1647 aa33.56■■■□□ 2.96
SHD-204ENST00000599689 MLECQ14165 292 aa33.56■■■□□ 2.96
SHD-204ENST00000599689 ADGRL2O95490 1459 aa33.56■■■□□ 2.96
SHD-204ENST00000599689 ACIN1Q9UKV3 1341 aaKnown RBP33.55■■■□□ 2.96
SHD-204ENST00000599689 ABCA6Q8N139 1617 aa33.54■■■□□ 2.96
SHD-204ENST00000599689 REREQ9P2R6 1566 aa33.54■■■□□ 2.96
SHD-204ENST00000599689 ARHGEF5Q12774 1597 aa33.53■■■□□ 2.96
SHD-204ENST00000599689 KIDINS220Q9ULH0 1771 aa33.52■■■□□ 2.96
SHD-204ENST00000599689 SHANK2Q9UPX8 1470 aa33.52■■■□□ 2.96
SHD-204ENST00000599689 MBD5Q9P267 1494 aa33.51■■■□□ 2.96
SHD-204ENST00000599689 NCOA1Q15788 1441 aa33.51■■■□□ 2.95
SHD-204ENST00000599689 ZNF316A6NFI3 1004 aaPredicted RBP33.5■■■□□ 2.95
SHD-204ENST00000599689 SIN3AQ96ST3 1273 aa33.48■■■□□ 2.95
SHD-204ENST00000599689 ANKRD30AQ9BXX3 1397 aa33.46■■■□□ 2.95
SHD-204ENST00000599689 AGLP35573 1532 aa33.45■■■□□ 2.95
SHD-204ENST00000599689 ATP7AQ04656 1500 aa33.45■■■□□ 2.95
SHD-204ENST00000599689 TRIM52Q96A61 297 aa33.45■■■□□ 2.94
SHD-204ENST00000599689 RSPH4AQ5TD94 716 aa33.44■■■□□ 2.94
SHD-204ENST00000599689 RIMS1Q86UR5 1692 aaKnown RBP33.43■■■□□ 2.94
SHD-204ENST00000599689 TIMELESSQ9UNS1 1208 aa33.42■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms