RNA–Protein interactions for RNA: ENST00000599644.1

SIPA1L3-208, Transcript of signal induced proliferation associated 1 like 3, human

TSL 4

Gene SIPA1L3, Length 545 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SIPA1L3-208	ENST00000599644	TRO	Q12816	1431 aa	Predicted RBP	32.11	■■■□□ 2.73
SIPA1L3-208	ENST00000599644	LRRIQ1	Q96JM4	1722 aa		32.11	■■■□□ 2.73
SIPA1L3-208	ENST00000599644	MYO5C	Q9NQX4	1742 aa		32.11	■■■□□ 2.73
SIPA1L3-208	ENST00000599644	POGZ	Q7Z3K3	1410 aa		32.1	■■■□□ 2.73
SIPA1L3-208	ENST00000599644	MAGI2	Q86UL8	1455 aa		32.09	■■■□□ 2.73
SIPA1L3-208	ENST00000599644	SIGLEC1	Q9BZZ2	1709 aa		32.07	■■■□□ 2.72
SIPA1L3-208	ENST00000599644	RIMS1	Q86UR5	1692 aa	Known RBP	32.06	■■■□□ 2.72
SIPA1L3-208	ENST00000599644	CLIP1	P30622	1438 aa		32.04	■■■□□ 2.72
SIPA1L3-208	ENST00000599644	MLEC	Q14165	292 aa		32.02	■■■□□ 2.72
SIPA1L3-208	ENST00000599644	PLPPR3	Q6T4P5	718 aa		32.01	■■■□□ 2.71
SIPA1L3-208	ENST00000599644	CASKIN1	Q8WXD9	1431 aa		32	■■■□□ 2.71
SIPA1L3-208	ENST00000599644	ARHGAP5	Q13017	1502 aa		32	■■■□□ 2.71
SIPA1L3-208	ENST00000599644	PCF11	O94913	1555 aa	Known RBP	32	■■■□□ 2.71
SIPA1L3-208	ENST00000599644	AFAP1	Q8N556	730 aa		31.96	■■■□□ 2.71
SIPA1L3-208	ENST00000599644	ATP10A	O60312	1499 aa		31.95	■■■□□ 2.7
SIPA1L3-208	ENST00000599644	CCDC18	Q5T9S5	1454 aa		31.94	■■■□□ 2.7
SIPA1L3-208	ENST00000599644	LMTK3	Q96Q04	1460 aa		31.92	■■■□□ 2.7
SIPA1L3-208	ENST00000599644	CDC42BPB	Q9Y5S2	1711 aa		31.92	■■■□□ 2.7
SIPA1L3-208	ENST00000599644	ZNF518A	Q6AHZ1	1483 aa		31.91	■■■□□ 2.7
SIPA1L3-208	ENST00000599644	C9orf84	Q5VXU9	1444 aa		31.9	■■■□□ 2.7
SIPA1L3-208	ENST00000599644	MYT1L	Q9UL68	1186 aa		31.88	■■■□□ 2.69
SIPA1L3-208	ENST00000599644	FER1L4	A9Z1Z3	1794 aa		31.86	■■■□□ 2.69
SIPA1L3-208	ENST00000599644	KDM5C	P41229	1560 aa		31.85	■■■□□ 2.69
SIPA1L3-208	ENST00000599644	FYCO1	Q9BQS8	1478 aa		31.85	■■■□□ 2.69
SIPA1L3-208	ENST00000599644	PREX2	Q70Z35	1606 aa		31.84	■■■□□ 2.69
SIPA1L3-208	ENST00000599644	HSPA2	P54652	639 aa		31.83	■■■□□ 2.69
SIPA1L3-208	ENST00000599644	ARHGEF12	Q9NZN5	1544 aa		31.82	■■■□□ 2.68
SIPA1L3-208	ENST00000599644	TRAPPC8	Q9Y2L5	1435 aa		31.8	■■■□□ 2.68
SIPA1L3-208	ENST00000599644	ABCC1	P33527	1531 aa		31.77	■■■□□ 2.68
SIPA1L3-208	ENST00000599644	CDC42BPA	Q5VT25	1732 aa		31.77	■■■□□ 2.68
SIPA1L3-208	ENST00000599644	DIP2C	Q9Y2E4	1556 aa		31.77	■■■□□ 2.68
SIPA1L3-208	ENST00000599644	MLH3	Q9UHC1	1453 aa		31.75	■■■□□ 2.67
SIPA1L3-208	ENST00000599644	CEBPA	P49715	358 aa	Predicted RBP	31.74	■■■□□ 2.67
SIPA1L3-208	ENST00000599644	ITSN2	Q9NZM3	1697 aa		31.73	■■■□□ 2.67
SIPA1L3-208	ENST00000599644	ZNF777	Q9ULD5	760 aa	Predicted RBP	31.73	■■■□□ 2.67
SIPA1L3-208	ENST00000599644	ABCA6	Q8N139	1617 aa		31.72	■■■□□ 2.67
SIPA1L3-208	ENST00000599644	GPATCH8	Q9UKJ3	1502 aa	Known RBP	31.67	■■■□□ 2.66
SIPA1L3-208	ENST00000599644	RERE	Q9P2R6	1566 aa		31.67	■■■□□ 2.66
SIPA1L3-208	ENST00000599644	FBXO41	Q8TF61	875 aa		31.66	■■■□□ 2.66
SIPA1L3-208	ENST00000599644	KIDINS220	Q9ULH0	1771 aa		31.64	■■■□□ 2.66
SIPA1L3-208	ENST00000599644	SAMD9L	Q8IVG5	1584 aa		31.64	■■■□□ 2.65
SIPA1L3-208	ENST00000599644	HNRNPM	P52272	730 aa	Known RBP eCLIP	31.62	■■■□□ 2.65
SIPA1L3-208	ENST00000599644	AGL	P35573	1532 aa		31.59	■■■□□ 2.65
SIPA1L3-208	ENST00000599644	SYCP2	Q9BX26	1530 aa		31.59	■■■□□ 2.65
SIPA1L3-208	ENST00000599644	MTUS2	Q5JR59	1369 aa		31.59	■■■□□ 2.65
SIPA1L3-208	ENST00000599644	CFDP1	Q9UEE9	299 aa	Predicted RBP	31.59	■■■□□ 2.65
SIPA1L3-208	ENST00000599644	PREX1	Q8TCU6	1659 aa		31.58	■■■□□ 2.65
SIPA1L3-208	ENST00000599644	CCNB3	Q8WWL7	1395 aa		31.57	■■■□□ 2.64
SIPA1L3-208	ENST00000599644	SPAG9	O60271	1321 aa	Known RBP	31.55	■■■□□ 2.64
SIPA1L3-208	ENST00000599644	ESF1	Q9H501	851 aa	Known RBP	31.55	■■■□□ 2.64
SIPA1L3-208	ENST00000599644	SETD1B	Q9UPS6	1966 aa	Known RBP	31.54	■■■□□ 2.64
SIPA1L3-208	ENST00000599644	CEP162	Q5TB80	1403 aa		31.52	■■■□□ 2.64
SIPA1L3-208	ENST00000599644	KIAA1107	Q9UPP5	1409 aa		31.51	■■■□□ 2.64
SIPA1L3-208	ENST00000599644	C3	P01024	1663 aa		31.51	■■■□□ 2.63
SIPA1L3-208	ENST00000599644	UHRF1BP1	Q6BDS2	1440 aa		31.49	■■■□□ 2.63
SIPA1L3-208	ENST00000599644	PLEKHH2	Q8IVE3	1493 aa		31.48	■■■□□ 2.63
SIPA1L3-208	ENST00000599644	ZNF644	Q9H582	1327 aa	Predicted RBP	31.46	■■■□□ 2.63
SIPA1L3-208	ENST00000599644	ATP7A	Q04656	1500 aa		31.44	■■■□□ 2.62
SIPA1L3-208	ENST00000599644	SUPT6H	Q7KZ85	1726 aa	Known RBP	31.43	■■■□□ 2.62
SIPA1L3-208	ENST00000599644	EHBP1L1	Q8N3D4	1523 aa		31.43	■■■□□ 2.62
SIPA1L3-208	ENST00000599644	TIAM1	Q13009	1591 aa		31.43	■■■□□ 2.62
SIPA1L3-208	ENST00000599644	CNTLN	Q9NXG0	1405 aa		31.42	■■■□□ 2.62
SIPA1L3-208	ENST00000599644	STRC	Q7RTU9	1775 aa		31.4	■■■□□ 2.62
SIPA1L3-208	ENST00000599644	INO80	Q9ULG1	1556 aa	Predicted RBP	31.4	■■■□□ 2.62
SIPA1L3-208	ENST00000599644	CERK	Q8TCT0	537 aa		31.39	■■■□□ 2.62
SIPA1L3-208	ENST00000599644	A2M	P01023	1474 aa		31.37	■■■□□ 2.61
SIPA1L3-208	ENST00000599644	DMRT2	Q9Y5R5	561 aa		31.35	■■■□□ 2.61
SIPA1L3-208	ENST00000599644	LOC105371045	A0A1W2PR82	267 aa		31.34	■■■□□ 2.61
SIPA1L3-208	ENST00000599644	PLXNC1	O60486	1568 aa		31.34	■■■□□ 2.61
SIPA1L3-208	ENST00000599644	MBD5	Q9P267	1494 aa		31.33	■■■□□ 2.61
SIPA1L3-208	ENST00000599644	ZMYM3	Q14202	1370 aa		31.33	■■■□□ 2.61
SIPA1L3-208	ENST00000599644	GGT6	Q6P531	493 aa		31.31	■■■□□ 2.6
SIPA1L3-208	ENST00000599644	MROH2A	A6NES4	1674 aa		31.3	■■■□□ 2.6
SIPA1L3-208	ENST00000599644	NCOA2	Q15596	1464 aa		31.28	■■■□□ 2.6
SIPA1L3-208	ENST00000599644	CLTC	Q00610	1675 aa	Known RBP	31.28	■■■□□ 2.6
SIPA1L3-208	ENST00000599644	ADGB	Q8N7X0	1667 aa		31.26	■■■□□ 2.6
SIPA1L3-208	ENST00000599644	NPAT	Q14207	1427 aa		31.26	■■■□□ 2.6
SIPA1L3-208	ENST00000599644	RTEL1-TNFRSF6B	F6WH68	1400 aa		31.23	■■■□□ 2.59
SIPA1L3-208	ENST00000599644	PTPRT	O14522	1441 aa		31.21	■■■□□ 2.59
SIPA1L3-208	ENST00000599644	CAMSAP2	Q08AD1	1489 aa		31.2	■■■□□ 2.58
SIPA1L3-208	ENST00000599644	NCOA1	Q15788	1441 aa		31.19	■■■□□ 2.58
SIPA1L3-208	ENST00000599644	VPS8	Q8N3P4	1428 aa		31.18	■■■□□ 2.58
SIPA1L3-208	ENST00000599644	DHX29	Q7Z478	1369 aa	Known RBP	31.17	■■■□□ 2.58
SIPA1L3-208	ENST00000599644	PTPRK	Q15262	1439 aa		31.17	■■■□□ 2.58
SIPA1L3-208	ENST00000599644	CCDC141	Q6ZP82	1450 aa		31.17	■■■□□ 2.58
SIPA1L3-208	ENST00000599644	PPP6R1	Q9UPN7	881 aa		31.17	■■■□□ 2.58
SIPA1L3-208	ENST00000599644	CAMSAP1	Q5T5Y3	1602 aa		31.15	■■■□□ 2.58
SIPA1L3-208	ENST00000599644	RSPH4A	Q5TD94	716 aa		31.13	■■■□□ 2.57
SIPA1L3-208	ENST00000599644	KIF3B	O15066	747 aa		31.12	■■■□□ 2.57
SIPA1L3-208	ENST00000599644	LRRC9	Q6ZRR7	1453 aa		31.12	■■■□□ 2.57
SIPA1L3-208	ENST00000599644	NCKAP5L	Q9HCH0	1330 aa		31.1	■■■□□ 2.57
SIPA1L3-208	ENST00000599644	MYO3A	Q8NEV4	1616 aa		31.09	■■■□□ 2.57
SIPA1L3-208	ENST00000599644	KANK4	Q5T7N3	995 aa	Predicted RBP	31.08	■■■□□ 2.57
SIPA1L3-208	ENST00000599644	TSPY4	P0CV99	314 aa		31.05	■■■□□ 2.56
SIPA1L3-208	ENST00000599644	TSPY10	P0CW01	314 aa		31.05	■■■□□ 2.56
SIPA1L3-208	ENST00000599644	ZNF142	P52746	1687 aa	Predicted RBP	31.05	■■■□□ 2.56
SIPA1L3-208	ENST00000599644	ARHGEF5	Q12774	1597 aa		31.05	■■■□□ 2.56
SIPA1L3-208	ENST00000599644	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	31.05	■■■□□ 2.56
SIPA1L3-208	ENST00000599644	LTBP4	Q8N2S1	1624 aa		31.03	■■■□□ 2.56
SIPA1L3-208	ENST00000599644	FBXO31	Q5XUX0	539 aa	Predicted RBP	31.01	■■■□□ 2.55

Retrieved 100 of 20,778 RNA–protein pairs in 80 ms