RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 CEP162Q5TB80 1403 aa22.55■■□□□ 1.2
LIG1-218ENST00000599322 LRRIQ1Q96JM4 1722 aa22.54■■□□□ 1.2
LIG1-218ENST00000599322 ZMYM4Q5VZL5 1548 aa22.54■■□□□ 1.2
LIG1-218ENST00000599322 KIF14Q15058 1648 aa22.53■■□□□ 1.2
LIG1-218ENST00000599322 RIMS1Q86UR5 1692 aaKnown RBP22.53■■□□□ 1.2
LIG1-218ENST00000599322 LOC105371045A0A1W2PR82 267 aa22.53■■□□□ 1.2
LIG1-218ENST00000599322 MYO5CQ9NQX4 1742 aa22.52■■□□□ 1.2
LIG1-218ENST00000599322 PLCH2O75038 1416 aa22.52■■□□□ 1.2
LIG1-218ENST00000599322 ARID4BQ4LE39 1312 aaPredicted RBP22.49■■□□□ 1.19
LIG1-218ENST00000599322 ZFYVE16Q7Z3T8 1539 aa22.48■■□□□ 1.19
LIG1-218ENST00000599322 YEATS2Q9ULM3 1422 aa22.47■■□□□ 1.19
LIG1-218ENST00000599322 MTUS2Q5JR59 1369 aa22.43■■□□□ 1.18
LIG1-218ENST00000599322 ARHGAP5Q13017 1502 aa22.42■■□□□ 1.18
LIG1-218ENST00000599322 MAGI2Q86UL8 1455 aa22.42■■□□□ 1.18
LIG1-218ENST00000599322 POGZQ7Z3K3 1410 aa22.42■■□□□ 1.18
LIG1-218ENST00000599322 SCAPERQ9BY12 1400 aa22.42■■□□□ 1.18
LIG1-218ENST00000599322 FER1L4A9Z1Z3 1794 aa22.42■■□□□ 1.18
LIG1-218ENST00000599322 LMTK3Q96Q04 1460 aa22.41■■□□□ 1.18
LIG1-218ENST00000599322 MYT1LQ9UL68 1186 aa22.4■■□□□ 1.18
LIG1-218ENST00000599322 CDC42BPBQ9Y5S2 1711 aa22.38■■□□□ 1.17
LIG1-218ENST00000599322 ZNF777Q9ULD5 760 aaPredicted RBP22.33■■□□□ 1.17
LIG1-218ENST00000599322 CCNB3Q8WWL7 1395 aa22.33■■□□□ 1.17
LIG1-218ENST00000599322 KDM5CP41229 1560 aa22.32■■□□□ 1.16
LIG1-218ENST00000599322 ATP10AO60312 1499 aa22.31■■□□□ 1.16
LIG1-218ENST00000599322 APLP2Q06481 763 aa22.31■■□□□ 1.16
LIG1-218ENST00000599322 CFDP1Q9UEE9 299 aaPredicted RBP22.31■■□□□ 1.16
LIG1-218ENST00000599322 VPS8Q8N3P4 1428 aa22.31■■□□□ 1.16
LIG1-218ENST00000599322 PREX2Q70Z35 1606 aa22.3■■□□□ 1.16
LIG1-218ENST00000599322 ARHGEF12Q9NZN5 1544 aa22.3■■□□□ 1.16
LIG1-218ENST00000599322 C9orf84Q5VXU9 1444 aa22.3■■□□□ 1.16
LIG1-218ENST00000599322 ZNF518AQ6AHZ1 1483 aa22.29■■□□□ 1.16
LIG1-218ENST00000599322 MLECQ14165 292 aa22.28■■□□□ 1.16
LIG1-218ENST00000599322 CDC42BPAQ5VT25 1732 aa22.28■■□□□ 1.16
LIG1-218ENST00000599322 EHBP1L1Q8N3D4 1523 aa22.27■■□□□ 1.16
LIG1-218ENST00000599322 PLPPR3Q6T4P5 718 aa22.27■■□□□ 1.16
LIG1-218ENST00000599322 AFAP1Q8N556 730 aa22.26■■□□□ 1.15
LIG1-218ENST00000599322 ITSN2Q9NZM3 1697 aa22.26■■□□□ 1.15
LIG1-218ENST00000599322 DIP2CQ9Y2E4 1556 aa22.25■■□□□ 1.15
LIG1-218ENST00000599322 ABCA6Q8N139 1617 aa22.24■■□□□ 1.15
LIG1-218ENST00000599322 GPATCH8Q9UKJ3 1502 aaKnown RBP22.24■■□□□ 1.15
LIG1-218ENST00000599322 HSPA2P54652 639 aa22.23■■□□□ 1.15
LIG1-218ENST00000599322 PREX1Q8TCU6 1659 aa22.23■■□□□ 1.15
LIG1-218ENST00000599322 PLEKHH2Q8IVE3 1493 aa22.22■■□□□ 1.15
LIG1-218ENST00000599322 ABCC1P33527 1531 aa22.22■■□□□ 1.15
LIG1-218ENST00000599322 FBXO41Q8TF61 875 aa22.21■■□□□ 1.15
LIG1-218ENST00000599322 REREQ9P2R6 1566 aa22.21■■□□□ 1.15
LIG1-218ENST00000599322 KIDINS220Q9ULH0 1771 aa22.18■■□□□ 1.14
LIG1-218ENST00000599322 TIAM1Q13009 1591 aa22.18■■□□□ 1.14
LIG1-218ENST00000599322 MLH3Q9UHC1 1453 aa22.17■■□□□ 1.14
LIG1-218ENST00000599322 TRAPPC8Q9Y2L5 1435 aa22.17■■□□□ 1.14
LIG1-218ENST00000599322 HNRNPMP52272 730 aaKnown RBP eCLIP22.17■■□□□ 1.14
LIG1-218ENST00000599322 KIAA1107Q9UPP5 1409 aa22.15■■□□□ 1.14
LIG1-218ENST00000599322 SUPT6HQ7KZ85 1726 aaKnown RBP22.15■■□□□ 1.14
LIG1-218ENST00000599322 SPAG9O60271 1321 aaKnown RBP22.15■■□□□ 1.14
LIG1-218ENST00000599322 C3P01024 1663 aa22.14■■□□□ 1.14
LIG1-218ENST00000599322 SETD1BQ9UPS6 1966 aaKnown RBP22.14■■□□□ 1.14
LIG1-218ENST00000599322 MAP3K1Q13233 1512 aa22.13■■□□□ 1.13
LIG1-218ENST00000599322 CEBPAP49715 358 aaPredicted RBP22.13■■□□□ 1.13
LIG1-218ENST00000599322 SAMD9LQ8IVG5 1584 aa22.12■■□□□ 1.13
LIG1-218ENST00000599322 NCOA2Q15596 1464 aa22.12■■□□□ 1.13
LIG1-218ENST00000599322 LRRC9Q6ZRR7 1453 aa22.12■■□□□ 1.13
LIG1-218ENST00000599322 ESF1Q9H501 851 aaKnown RBP22.12■■□□□ 1.13
LIG1-218ENST00000599322 STRCQ7RTU9 1775 aa22.12■■□□□ 1.13
LIG1-218ENST00000599322 AGLP35573 1532 aa22.11■■□□□ 1.13
LIG1-218ENST00000599322 SYCP2Q9BX26 1530 aa22.11■■□□□ 1.13
LIG1-218ENST00000599322 RSPH4AQ5TD94 716 aa22.1■■□□□ 1.13
LIG1-218ENST00000599322 ZNF644Q9H582 1327 aaPredicted RBP22.06■■□□□ 1.12
LIG1-218ENST00000599322 KANK4Q5T7N3 995 aaPredicted RBP22.05■■□□□ 1.12
LIG1-218ENST00000599322 TSPY4P0CV99 314 aa22.03■■□□□ 1.12
LIG1-218ENST00000599322 TSPY10P0CW01 314 aa22.03■■□□□ 1.12
LIG1-218ENST00000599322 UHRF1BP1Q6BDS2 1440 aa22.02■■□□□ 1.12
LIG1-218ENST00000599322 MROH2AA6NES4 1674 aa22■■□□□ 1.11
LIG1-218ENST00000599322 INO80Q9ULG1 1556 aaPredicted RBP21.99■■□□□ 1.11
LIG1-218ENST00000599322 ATP7AQ04656 1500 aa21.99■■□□□ 1.11
LIG1-218ENST00000599322 CAMSAP2Q08AD1 1489 aa21.98■■□□□ 1.11
LIG1-218ENST00000599322 CERKQ8TCT0 537 aa21.97■■□□□ 1.11
LIG1-218ENST00000599322 CCDC141Q6ZP82 1450 aa21.96■■□□□ 1.11
LIG1-218ENST00000599322 RTEL1-TNFRSF6BF6WH68 1400 aa21.96■■□□□ 1.11
LIG1-218ENST00000599322 MIA2Q96PC5 1412 aa21.96■■□□□ 1.11
LIG1-218ENST00000599322 MBD5Q9P267 1494 aa21.96■■□□□ 1.11
LIG1-218ENST00000599322 PLXNC1O60486 1568 aa21.95■■□□□ 1.11
LIG1-218ENST00000599322 MYOM3Q5VTT5 1437 aa21.95■■□□□ 1.1
LIG1-218ENST00000599322 CNTLNQ9NXG0 1405 aa21.94■■□□□ 1.1
LIG1-218ENST00000599322 A2MP01023 1474 aa21.94■■□□□ 1.1
LIG1-218ENST00000599322 CLTCQ00610 1675 aaKnown RBP21.94■■□□□ 1.1
LIG1-218ENST00000599322 ADGBQ8N7X0 1667 aa21.91■■□□□ 1.1
LIG1-218ENST00000599322 GGT6Q6P531 493 aa21.9■■□□□ 1.1
LIG1-218ENST00000599322 PPP6R1Q9UPN7 881 aa21.88■■□□□ 1.09
LIG1-218ENST00000599322 ARHGEF5Q12774 1597 aa21.87■■□□□ 1.09
LIG1-218ENST00000599322 DMRT2Q9Y5R5 561 aa21.87■■□□□ 1.09
LIG1-218ENST00000599322 DHX29Q7Z478 1369 aaKnown RBP21.87■■□□□ 1.09
LIG1-218ENST00000599322 PTPRTO14522 1441 aa21.86■■□□□ 1.09
LIG1-218ENST00000599322 NPATQ14207 1427 aa21.86■■□□□ 1.09
LIG1-218ENST00000599322 ZMYM3Q14202 1370 aa21.85■■□□□ 1.09
LIG1-218ENST00000599322 ZNF142P52746 1687 aaPredicted RBP21.85■■□□□ 1.09
LIG1-218ENST00000599322 MYO3AQ8NEV4 1616 aa21.84■■□□□ 1.09
LIG1-218ENST00000599322 NCOA1Q15788 1441 aa21.83■■□□□ 1.09
LIG1-218ENST00000599322 KIF3BO15066 747 aa21.83■■□□□ 1.09
LIG1-218ENST00000599322 CAMSAP1Q5T5Y3 1602 aa21.83■■□□□ 1.08
LIG1-218ENST00000599322 LTBP4Q8N2S1 1624 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms