RNA–Protein interactions for RNA: ENST00000599016.5

LTBP4-224, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 726 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-224ENST00000599016 GPATCH8Q9UKJ3 1502 aaKnown RBP33.56■■■□□ 2.96
LTBP4-224ENST00000599016 PREX2Q70Z35 1606 aa33.56■■■□□ 2.96
LTBP4-224ENST00000599016 MAP3K4Q9Y6R4 1608 aa33.53■■■□□ 2.96
LTBP4-224ENST00000599016 CD109Q6YHK3 1445 aa33.53■■■□□ 2.96
LTBP4-224ENST00000599016 CDC42BPBQ9Y5S2 1711 aa33.52■■■□□ 2.96
LTBP4-224ENST00000599016 PLCH2O75038 1416 aa33.51■■■□□ 2.95
LTBP4-224ENST00000599016 ARAP3Q8WWN8 1544 aa33.49■■■□□ 2.95
LTBP4-224ENST00000599016 MIA2Q96PC5 1412 aa33.49■■■□□ 2.95
LTBP4-224ENST00000599016 CFDP1Q9UEE9 299 aaPredicted RBP33.49■■■□□ 2.95
LTBP4-224ENST00000599016 FGD6Q6ZV73 1430 aa33.48■■■□□ 2.95
LTBP4-224ENST00000599016 ARHGAP5Q13017 1502 aa33.48■■■□□ 2.95
LTBP4-224ENST00000599016 EFCAB2Q5VUJ9 269 aa33.42■■■□□ 2.94
LTBP4-224ENST00000599016 PTPN23Q9H3S7 1636 aa33.42■■■□□ 2.94
LTBP4-224ENST00000599016 CFAP74Q9C0B2 1584 aa33.4■■■□□ 2.94
LTBP4-224ENST00000599016 RRBP1Q9P2E9 1410 aaKnown RBP33.4■■■□□ 2.94
LTBP4-224ENST00000599016 HECW2Q9P2P5 1572 aa33.39■■■□□ 2.94
LTBP4-224ENST00000599016 ZNF777Q9ULD5 760 aaPredicted RBP33.39■■■□□ 2.94
LTBP4-224ENST00000599016 FANCAO15360 1455 aa33.37■■■□□ 2.93
LTBP4-224ENST00000599016 TCOF1Q13428 1488 aaKnown RBP33.35■■■□□ 2.93
LTBP4-224ENST00000599016 TEX14Q8IWB6 1497 aa33.34■■■□□ 2.93
LTBP4-224ENST00000599016 CAMSAP2Q08AD1 1489 aa33.33■■■□□ 2.93
LTBP4-224ENST00000599016 FAM50AQ14320 339 aaKnown RBP33.33■■■□□ 2.93
LTBP4-224ENST00000599016 SAMD9LQ8IVG5 1584 aa33.32■■■□□ 2.92
LTBP4-224ENST00000599016 PLEKHH2Q8IVE3 1493 aa33.31■■■□□ 2.92
LTBP4-224ENST00000599016 NEO1Q92859 1461 aa33.31■■■□□ 2.92
LTBP4-224ENST00000599016 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.3■■■□□ 2.922e-6■■■■□ 20.4
LTBP4-224ENST00000599016 ZNF644Q9H582 1327 aaPredicted RBP33.28■■■□□ 2.92
LTBP4-224ENST00000599016 TRIM26Q12899 539 aaPredicted RBP33.27■■■□□ 2.92
LTBP4-224ENST00000599016 AKNAQ7Z591 1439 aa33.27■■■□□ 2.92
LTBP4-224ENST00000599016 ABCC1P33527 1531 aa33.23■■■□□ 2.91
LTBP4-224ENST00000599016 KIAA1107Q9UPP5 1409 aa33.22■■■□□ 2.91
LTBP4-224ENST00000599016 SYCP2Q9BX26 1530 aa33.2■■■□□ 2.91
LTBP4-224ENST00000599016 HNRNPMP52272 730 aaKnown RBP eCLIP33.17■■■□□ 2.9
LTBP4-224ENST00000599016 ARHGEF5Q12774 1597 aa33.17■■■□□ 2.9
LTBP4-224ENST00000599016 SCAPERQ9BY12 1400 aa33.16■■■□□ 2.9
LTBP4-224ENST00000599016 DNMT1P26358 1616 aaKnown RBP33.16■■■□□ 2.9
LTBP4-224ENST00000599016 RSPH4AQ5TD94 716 aa33.15■■■□□ 2.9
LTBP4-224ENST00000599016 ARHGEF12Q9NZN5 1544 aa33.12■■■□□ 2.89
LTBP4-224ENST00000599016 MBD5Q9P267 1494 aa33.12■■■□□ 2.89
LTBP4-224ENST00000599016 CCDC141Q6ZP82 1450 aa33.11■■■□□ 2.89
LTBP4-224ENST00000599016 ITGAEP38570 1179 aa33.1■■■□□ 2.89
LTBP4-224ENST00000599016 DAPK1P53355 1430 aa33.1■■■□□ 2.89
LTBP4-224ENST00000599016 CROCC2H7BZ55 1655 aa33.08■■■□□ 2.89
LTBP4-224ENST00000599016 DENND4BO75064 1496 aaPredicted RBP33.08■■■□□ 2.89
LTBP4-224ENST00000599016 ABCC5O15440 1437 aa33.07■■■□□ 2.88
LTBP4-224ENST00000599016 TRAPPC8Q9Y2L5 1435 aa33.05■■■□□ 2.88
LTBP4-224ENST00000599016 TSPY4P0CV99 314 aa33.05■■■□□ 2.88
LTBP4-224ENST00000599016 TSPY10P0CW01 314 aa33.05■■■□□ 2.88
LTBP4-224ENST00000599016 ZNF518AQ6AHZ1 1483 aa33.04■■■□□ 2.88
LTBP4-224ENST00000599016 POGZQ7Z3K3 1410 aa33.03■■■□□ 2.88
LTBP4-224ENST00000599016 SHANK2Q9UPX8 1470 aa33.01■■■□□ 2.88
LTBP4-224ENST00000599016 RICTORQ6R327 1708 aa33.01■■■□□ 2.87
LTBP4-224ENST00000599016 AFAP1Q8N556 730 aa32.98■■■□□ 2.87
LTBP4-224ENST00000599016 ADGBQ8N7X0 1667 aa32.97■■■□□ 2.87
LTBP4-224ENST00000599016 MAST1Q9Y2H9 1570 aa32.97■■■□□ 2.87
LTBP4-224ENST00000599016 PTPRKQ15262 1439 aa32.96■■■□□ 2.87
LTBP4-224ENST00000599016 C9orf84Q5VXU9 1444 aa32.96■■■□□ 2.87
LTBP4-224ENST00000599016 KDM5CP41229 1560 aa32.96■■■□□ 2.87
LTBP4-224ENST00000599016 RAPGEF3O95398 923 aa32.95■■■□□ 2.87
LTBP4-224ENST00000599016 CHIC2Q9UKJ5 165 aa32.95■■■□□ 2.87
LTBP4-224ENST00000599016 SPAG9O60271 1321 aaKnown RBP32.95■■■□□ 2.86
LTBP4-224ENST00000599016 FBXO41Q8TF61 875 aa32.94■■■□□ 2.86
LTBP4-224ENST00000599016 PCGF6Q9BYE7 350 aa32.94■■■□□ 2.86
LTBP4-224ENST00000599016 FRMPD1Q5SYB0 1578 aa32.92■■■□□ 2.86
LTBP4-224ENST00000599016 MYT1LQ9UL68 1186 aa32.91■■■□□ 2.86
LTBP4-224ENST00000599016 RTEL1-TNFRSF6BF6WH68 1400 aa32.9■■■□□ 2.86
LTBP4-224ENST00000599016 INO80Q9ULG1 1556 aaPredicted RBP32.89■■■□□ 2.86
LTBP4-224ENST00000599016 ATP7AQ04656 1500 aa32.88■■■□□ 2.85
LTBP4-224ENST00000599016 ADGRL2O95490 1459 aa32.88■■■□□ 2.85
LTBP4-224ENST00000599016 ROCK1Q13464 1354 aa32.88■■■□□ 2.85
LTBP4-224ENST00000599016 ANKRD30AQ9BXX3 1397 aa32.88■■■□□ 2.85
LTBP4-224ENST00000599016 ZMYM4Q5VZL5 1548 aa32.87■■■□□ 2.85
LTBP4-224ENST00000599016 ZFYVE16Q7Z3T8 1539 aa32.87■■■□□ 2.85
LTBP4-224ENST00000599016 MLH3Q9UHC1 1453 aa32.86■■■□□ 2.85
LTBP4-224ENST00000599016 KIDINS220Q9ULH0 1771 aa32.84■■■□□ 2.85
LTBP4-224ENST00000599016 PLXNC1O60486 1568 aa32.83■■■□□ 2.85
LTBP4-224ENST00000599016 NCOA1Q15788 1441 aa32.82■■■□□ 2.84
LTBP4-224ENST00000599016 MAGI2Q86UL8 1455 aa32.81■■■□□ 2.84
LTBP4-224ENST00000599016 RRP7BPQ9NSQ0 103 aa32.8■■■□□ 2.84
LTBP4-224ENST00000599016 GCC2Q8IWJ2 1684 aa32.77■■■□□ 2.84
LTBP4-224ENST00000599016 KIF15Q9NS87 1388 aa32.76■■■□□ 2.83
LTBP4-224ENST00000599016 HFM1A2PYH4 1435 aa32.76■■■□□ 2.83
LTBP4-224ENST00000599016 PTPRMP28827 1452 aa32.75■■■□□ 2.83
LTBP4-224ENST00000599016 ABCA6Q8N139 1617 aa32.73■■■□□ 2.83
LTBP4-224ENST00000599016 NAIPQ13075 1403 aa32.72■■■□□ 2.83
LTBP4-224ENST00000599016 DUOX2Q9NRD8 1548 aa32.72■■■□□ 2.83
LTBP4-224ENST00000599016 DIP2CQ9Y2E4 1556 aa32.7■■■□□ 2.83
LTBP4-224ENST00000599016 SETD5Q9C0A6 1442 aa32.7■■■□□ 2.83
LTBP4-224ENST00000599016 YEATS2Q9ULM3 1422 aa32.68■■■□□ 2.82
LTBP4-224ENST00000599016 ARHGEF40Q8TER5 1519 aa32.67■■■□□ 2.82
LTBP4-224ENST00000599016 ADAMTSL3P82987 1691 aa32.66■■■□□ 2.82
LTBP4-224ENST00000599016 A2MP01023 1474 aa32.64■■■□□ 2.82
LTBP4-224ENST00000599016 ANKRD50Q9ULJ7 1429 aa32.64■■■□□ 2.82
LTBP4-224ENST00000599016 ATP10AO60312 1499 aa32.63■■■□□ 2.81
LTBP4-224ENST00000599016 DHX29Q7Z478 1369 aaKnown RBP32.62■■■□□ 2.81
LTBP4-224ENST00000599016 ERBINQ96RT1 1412 aa32.61■■■□□ 2.81
LTBP4-224ENST00000599016 REREQ9P2R6 1566 aa32.58■■■□□ 2.81
LTBP4-224ENST00000599016 RAB3GAP2Q9H2M9 1393 aa32.58■■■□□ 2.81
LTBP4-224ENST00000599016 EIF2AK4Q9P2K8 1649 aaKnown RBP32.57■■■□□ 2.8
LTBP4-224ENST00000599016 ARID4BQ4LE39 1312 aaPredicted RBP32.55■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms