RNA–Protein interactions for RNA: ENST00000598871.5

CALM3-211, Transcript of calmodulin 3, humanhuman

TSL 4 BASIC

Gene CALM3, Length 561 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALM3-211ENST00000598871 ZFYVE16Q7Z3T8 1539 aa28.72■■■□□ 2.19
CALM3-211ENST00000598871 CLIP1P30622 1438 aa28.7■■■□□ 2.19
CALM3-211ENST00000598871 MADDQ8WXG6 1647 aa28.69■■■□□ 2.18
CALM3-211ENST00000598871 KIF14Q15058 1648 aa28.68■■■□□ 2.18
CALM3-211ENST00000598871 CASKIN1Q8WXD9 1431 aa28.68■■■□□ 2.18
CALM3-211ENST00000598871 MYO5CQ9NQX4 1742 aa28.63■■■□□ 2.17
CALM3-211ENST00000598871 CCDC18Q5T9S5 1454 aa28.61■■■□□ 2.17
CALM3-211ENST00000598871 ARHGAP5Q13017 1502 aa28.61■■■□□ 2.17
CALM3-211ENST00000598871 MLECQ14165 292 aa28.61■■■□□ 2.17
CALM3-211ENST00000598871 AFAP1Q8N556 730 aa28.61■■■□□ 2.17
CALM3-211ENST00000598871 ATP10AO60312 1499 aa28.6■■■□□ 2.17
CALM3-211ENST00000598871 LRRIQ1Q96JM4 1722 aa28.59■■■□□ 2.17
CALM3-211ENST00000598871 ZNF518AQ6AHZ1 1483 aa28.58■■■□□ 2.17
CALM3-211ENST00000598871 SIGLEC1Q9BZZ2 1709 aa28.57■■■□□ 2.16
CALM3-211ENST00000598871 PCF11O94913 1555 aaKnown RBP28.57■■■□□ 2.16
CALM3-211ENST00000598871 RIMS1Q86UR5 1692 aaKnown RBP28.55■■■□□ 2.16
CALM3-211ENST00000598871 LMTK3Q96Q04 1460 aa28.55■■■□□ 2.16
CALM3-211ENST00000598871 C9orf84Q5VXU9 1444 aa28.55■■■□□ 2.16
CALM3-211ENST00000598871 PLPPR3Q6T4P5 718 aa28.53■■■□□ 2.16
CALM3-211ENST00000598871 FYCO1Q9BQS8 1478 aa28.53■■■□□ 2.16
CALM3-211ENST00000598871 KDM5CP41229 1560 aa28.5■■■□□ 2.15
CALM3-211ENST00000598871 MYT1LQ9UL68 1186 aa28.49■■■□□ 2.15
CALM3-211ENST00000598871 ARHGEF12Q9NZN5 1544 aa28.46■■■□□ 2.15
CALM3-211ENST00000598871 CDC42BPBQ9Y5S2 1711 aa28.45■■■□□ 2.14
CALM3-211ENST00000598871 MLH3Q9UHC1 1453 aa28.45■■■□□ 2.14
CALM3-211ENST00000598871 TRAPPC8Q9Y2L5 1435 aa28.44■■■□□ 2.14
CALM3-211ENST00000598871 HSPA2P54652 639 aa28.44■■■□□ 2.14
CALM3-211ENST00000598871 PREX2Q70Z35 1606 aa28.43■■■□□ 2.14
CALM3-211ENST00000598871 ABCC1P33527 1531 aa28.41■■■□□ 2.14
CALM3-211ENST00000598871 FER1L4A9Z1Z3 1794 aa28.38■■■□□ 2.13
CALM3-211ENST00000598871 DIP2CQ9Y2E4 1556 aa28.37■■■□□ 2.13
CALM3-211ENST00000598871 CEBPAP49715 358 aaPredicted RBP28.37■■■□□ 2.13
CALM3-211ENST00000598871 ZNF777Q9ULD5 760 aaPredicted RBP28.37■■■□□ 2.13
CALM3-211ENST00000598871 GPATCH8Q9UKJ3 1502 aaKnown RBP28.36■■■□□ 2.13
CALM3-211ENST00000598871 REREQ9P2R6 1566 aa28.36■■■□□ 2.13
CALM3-211ENST00000598871 FBXO41Q8TF61 875 aa28.35■■■□□ 2.13
CALM3-211ENST00000598871 CDC42BPAQ5VT25 1732 aa28.32■■■□□ 2.12
CALM3-211ENST00000598871 ABCA6Q8N139 1617 aa28.31■■■□□ 2.12
CALM3-211ENST00000598871 ITSN2Q9NZM3 1697 aa28.3■■■□□ 2.12
CALM3-211ENST00000598871 AGLP35573 1532 aa28.3■■■□□ 2.12
CALM3-211ENST00000598871 CFDP1Q9UEE9 299 aaPredicted RBP28.3■■■□□ 2.12
CALM3-211ENST00000598871 HNRNPMP52272 730 aaKnown RBP eCLIP28.29■■■□□ 2.12
CALM3-211ENST00000598871 MTUS2Q5JR59 1369 aa28.28■■■□□ 2.12
CALM3-211ENST00000598871 CCNB3Q8WWL7 1395 aa28.27■■■□□ 2.12
CALM3-211ENST00000598871 KIAA1107Q9UPP5 1409 aa28.26■■■□□ 2.12
CALM3-211ENST00000598871 SPAG9O60271 1321 aaKnown RBP28.26■■■□□ 2.11
CALM3-211ENST00000598871 SAMD9LQ8IVG5 1584 aa28.25■■■□□ 2.11
CALM3-211ENST00000598871 ESF1Q9H501 851 aaKnown RBP28.25■■■□□ 2.11
CALM3-211ENST00000598871 KIDINS220Q9ULH0 1771 aa28.24■■■□□ 2.11
CALM3-211ENST00000598871 SYCP2Q9BX26 1530 aa28.23■■■□□ 2.11
CALM3-211ENST00000598871 PLEKHH2Q8IVE3 1493 aa28.22■■■□□ 2.11
CALM3-211ENST00000598871 CEP162Q5TB80 1403 aa28.22■■■□□ 2.11
CALM3-211ENST00000598871 UHRF1BP1Q6BDS2 1440 aa28.18■■■□□ 2.1
CALM3-211ENST00000598871 PREX1Q8TCU6 1659 aa28.16■■■□□ 2.1
CALM3-211ENST00000598871 CNTLNQ9NXG0 1405 aa28.16■■■□□ 2.1
CALM3-211ENST00000598871 ZNF644Q9H582 1327 aaPredicted RBP28.15■■■□□ 2.1
CALM3-211ENST00000598871 EHBP1L1Q8N3D4 1523 aa28.12■■■□□ 2.09
CALM3-211ENST00000598871 SETD1BQ9UPS6 1966 aaKnown RBP28.11■■■□□ 2.09
CALM3-211ENST00000598871 DMRT2Q9Y5R5 561 aa28.11■■■□□ 2.09
CALM3-211ENST00000598871 ATP7AQ04656 1500 aa28.11■■■□□ 2.09
CALM3-211ENST00000598871 CERKQ8TCT0 537 aa28.09■■■□□ 2.09
CALM3-211ENST00000598871 C3P01024 1663 aa28.09■■■□□ 2.09
CALM3-211ENST00000598871 TIAM1Q13009 1591 aa28.08■■■□□ 2.09
CALM3-211ENST00000598871 A2MP01023 1474 aa28.08■■■□□ 2.09
CALM3-211ENST00000598871 MBD5Q9P267 1494 aa28.08■■■□□ 2.09
CALM3-211ENST00000598871 ZMYM3Q14202 1370 aa28.07■■■□□ 2.08
CALM3-211ENST00000598871 INO80Q9ULG1 1556 aaPredicted RBP28.06■■■□□ 2.08
CALM3-211ENST00000598871 PLXNC1O60486 1568 aa28.03■■■□□ 2.08
CALM3-211ENST00000598871 LOC105371045A0A1W2PR82 267 aa28.03■■■□□ 2.08
CALM3-211ENST00000598871 NPATQ14207 1427 aa28.02■■■□□ 2.08
CALM3-211ENST00000598871 GGT6Q6P531 493 aa28.02■■■□□ 2.08
CALM3-211ENST00000598871 PPP6R1Q9UPN7 881 aa28■■■□□ 2.07
CALM3-211ENST00000598871 NCOA2Q15596 1464 aa28■■■□□ 2.07
CALM3-211ENST00000598871 RTEL1-TNFRSF6BF6WH68 1400 aa28■■■□□ 2.07
CALM3-211ENST00000598871 STRCQ7RTU9 1775 aa27.99■■■□□ 2.07
CALM3-211ENST00000598871 SUPT6HQ7KZ85 1726 aaKnown RBP27.99■■■□□ 2.07
CALM3-211ENST00000598871 PTPRTO14522 1441 aa27.96■■■□□ 2.07
CALM3-211ENST00000598871 RSPH4AQ5TD94 716 aa27.96■■■□□ 2.07
CALM3-211ENST00000598871 MROH2AA6NES4 1674 aa27.95■■■□□ 2.07
CALM3-211ENST00000598871 DHX29Q7Z478 1369 aaKnown RBP27.95■■■□□ 2.06
CALM3-211ENST00000598871 VPS8Q8N3P4 1428 aa27.92■■■□□ 2.06
CALM3-211ENST00000598871 NCOA1Q15788 1441 aa27.92■■■□□ 2.06
CALM3-211ENST00000598871 CCDC141Q6ZP82 1450 aa27.9■■■□□ 2.06
CALM3-211ENST00000598871 PTPRKQ15262 1439 aa27.9■■■□□ 2.06
CALM3-211ENST00000598871 ADGBQ8N7X0 1667 aa27.9■■■□□ 2.06
CALM3-211ENST00000598871 CAMSAP2Q08AD1 1489 aa27.89■■■□□ 2.06
CALM3-211ENST00000598871 LRRC9Q6ZRR7 1453 aa27.87■■■□□ 2.05
CALM3-211ENST00000598871 CLTCQ00610 1675 aaKnown RBP27.87■■■□□ 2.05
CALM3-211ENST00000598871 KIF3BO15066 747 aa27.86■■■□□ 2.05
CALM3-211ENST00000598871 TSPY4P0CV99 314 aa27.84■■■□□ 2.05
CALM3-211ENST00000598871 TSPY10P0CW01 314 aa27.84■■■□□ 2.05
CALM3-211ENST00000598871 CAMSAP1Q5T5Y3 1602 aa27.83■■■□□ 2.05
CALM3-211ENST00000598871 KANK4Q5T7N3 995 aaPredicted RBP27.82■■■□□ 2.04
CALM3-211ENST00000598871 NCKAP5LQ9HCH0 1330 aa27.8■■■□□ 2.04
CALM3-211ENST00000598871 ARHGEF5Q12774 1597 aa27.78■■■□□ 2.04
CALM3-211ENST00000598871 MAP3K1Q13233 1512 aa27.78■■■□□ 2.04
CALM3-211ENST00000598871 PKD2Q13563 968 aa27.78■■■□□ 2.04
CALM3-211ENST00000598871 WASHC2CQ9Y4E1 1318 aa27.76■■■□□ 2.03
CALM3-211ENST00000598871 PLA2R1Q13018 1463 aa27.76■■■□□ 2.03
CALM3-211ENST00000598871 MYO3AQ8NEV4 1616 aa27.75■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms