RNA–Protein interactions for RNA: ENST00000598808.5

IRF3-221, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-221ENST00000598808 NCOA2Q15596 1464 aa31.37■■■□□ 2.61
IRF3-221ENST00000598808 EFCAB2Q5VUJ9 269 aa31.36■■■□□ 2.61
IRF3-221ENST00000598808 ARAP3Q8WWN8 1544 aa31.36■■■□□ 2.61
IRF3-221ENST00000598808 CDC42BPBQ9Y5S2 1711 aa31.36■■■□□ 2.61
IRF3-221ENST00000598808 AKNAQ7Z591 1439 aa31.35■■■□□ 2.61
IRF3-221ENST00000598808 PHLDB1Q86UU1 1377 aa31.33■■■□□ 2.61
IRF3-221ENST00000598808 GPATCH8Q9UKJ3 1502 aaKnown RBP31.32■■■□□ 2.6
IRF3-221ENST00000598808 ITSN2Q9NZM3 1697 aa31.32■■■□□ 2.6
IRF3-221ENST00000598808 ZNF777Q9ULD5 760 aaPredicted RBP31.32■■■□□ 2.6
IRF3-221ENST00000598808 ADGRL1O94910 1474 aa31.31■■■□□ 2.6
IRF3-221ENST00000598808 CFDP1Q9UEE9 299 aaPredicted RBP31.29■■■□□ 2.6
IRF3-221ENST00000598808 DENND4BO75064 1496 aaPredicted RBP31.24■■■□□ 2.59
IRF3-221ENST00000598808 RAPGEF3O95398 923 aa31.24■■■□□ 2.59
IRF3-221ENST00000598808 SCAPERQ9BY12 1400 aa31.24■■■□□ 2.59
IRF3-221ENST00000598808 PPARGC1BQ86YN6 1023 aaKnown RBP31.21■■■□□ 2.59
IRF3-221ENST00000598808 SAMD9LQ8IVG5 1584 aa31.19■■■□□ 2.58
IRF3-221ENST00000598808 ABCC1P33527 1531 aa31.18■■■□□ 2.58
IRF3-221ENST00000598808 FRMPD1Q5SYB0 1578 aa31.17■■■□□ 2.58
IRF3-221ENST00000598808 RICTORQ6R327 1708 aa31.16■■■□□ 2.58
IRF3-221ENST00000598808 POGZQ7Z3K3 1410 aa31.15■■■□□ 2.58
IRF3-221ENST00000598808 AEBP2Q6ZN18 517 aaPredicted RBP31.15■■■□□ 2.58
IRF3-221ENST00000598808 KDM4FA0A1W2PPD8 638 aa31.14■■■□□ 2.57
IRF3-221ENST00000598808 SYCP2Q9BX26 1530 aa31.13■■■□□ 2.57
IRF3-221ENST00000598808 MYOM3Q5VTT5 1437 aa31.13■■■□□ 2.57
IRF3-221ENST00000598808 MYT1LQ9UL68 1186 aa31.11■■■□□ 2.57
IRF3-221ENST00000598808 PLEKHH2Q8IVE3 1493 aa31.11■■■□□ 2.57
IRF3-221ENST00000598808 ZNF644Q9H582 1327 aaPredicted RBP31.1■■■□□ 2.57
IRF3-221ENST00000598808 CAMSAP2Q08AD1 1489 aa31.08■■■□□ 2.57
IRF3-221ENST00000598808 ZNF518AQ6AHZ1 1483 aa31.08■■■□□ 2.57
IRF3-221ENST00000598808 ARHGEF12Q9NZN5 1544 aa31.08■■■□□ 2.57
IRF3-221ENST00000598808 HNRNPMP52272 730 aaKnown RBP eCLIP31.08■■■□□ 2.57
IRF3-221ENST00000598808 TRAPPC8Q9Y2L5 1435 aa31.05■■■□□ 2.56
IRF3-221ENST00000598808 AFAP1Q8N556 730 aa31.05■■■□□ 2.56
IRF3-221ENST00000598808 ZMYM4Q5VZL5 1548 aa31.03■■■□□ 2.56
IRF3-221ENST00000598808 MIA2Q96PC5 1412 aa31.02■■■□□ 2.56
IRF3-221ENST00000598808 KIAA1107Q9UPP5 1409 aa31.01■■■□□ 2.56
IRF3-221ENST00000598808 ZFYVE16Q7Z3T8 1539 aa31■■■□□ 2.55
IRF3-221ENST00000598808 FGD6Q6ZV73 1430 aa30.99■■■□□ 2.55
IRF3-221ENST00000598808 KDM5CP41229 1560 aa30.99■■■□□ 2.55
IRF3-221ENST00000598808 PTPN23Q9H3S7 1636 aa30.98■■■□□ 2.55
IRF3-221ENST00000598808 HECW2Q9P2P5 1572 aa30.98■■■□□ 2.55
IRF3-221ENST00000598808 ARHGEF40Q8TER5 1519 aa30.98■■■□□ 2.55
IRF3-221ENST00000598808 YEATS2Q9ULM3 1422 aa30.94■■■□□ 2.54
IRF3-221ENST00000598808 MAGI2Q86UL8 1455 aa30.93■■■□□ 2.54
IRF3-221ENST00000598808 SPAG9O60271 1321 aaKnown RBP30.93■■■□□ 2.54
IRF3-221ENST00000598808 CCDC141Q6ZP82 1450 aa30.92■■■□□ 2.54
IRF3-221ENST00000598808 MBD5Q9P267 1494 aa30.91■■■□□ 2.54
IRF3-221ENST00000598808 FAM50AQ14320 339 aaKnown RBP30.9■■■□□ 2.54
IRF3-221ENST00000598808 MLH3Q9UHC1 1453 aa30.87■■■□□ 2.53
IRF3-221ENST00000598808 ARHGEF5Q12774 1597 aa30.87■■■□□ 2.53
IRF3-221ENST00000598808 ARID4BQ4LE39 1312 aaPredicted RBP30.86■■■□□ 2.53
IRF3-221ENST00000598808 ATP7AQ04656 1500 aa30.85■■■□□ 2.53
IRF3-221ENST00000598808 ABCA6Q8N139 1617 aa30.85■■■□□ 2.53
IRF3-221ENST00000598808 TCOF1Q13428 1488 aaKnown RBP30.84■■■□□ 2.53
IRF3-221ENST00000598808 KIDINS220Q9ULH0 1771 aa30.84■■■□□ 2.53
IRF3-221ENST00000598808 INO80Q9ULG1 1556 aaPredicted RBP30.83■■■□□ 2.53
IRF3-221ENST00000598808 RSPH4AQ5TD94 716 aa30.82■■■□□ 2.53
IRF3-221ENST00000598808 DIP2CQ9Y2E4 1556 aa30.82■■■□□ 2.53
IRF3-221ENST00000598808 TSPY4P0CV99 314 aa30.82■■■□□ 2.52
IRF3-221ENST00000598808 TSPY10P0CW01 314 aa30.82■■■□□ 2.52
IRF3-221ENST00000598808 ATP10AO60312 1499 aa30.81■■■□□ 2.52
IRF3-221ENST00000598808 C9orf84Q5VXU9 1444 aa30.8■■■□□ 2.52
IRF3-221ENST00000598808 SIGLEC1Q9BZZ2 1709 aa30.78■■■□□ 2.52
IRF3-221ENST00000598808 DNMT1P26358 1616 aaKnown RBP30.76■■■□□ 2.51
IRF3-221ENST00000598808 ADAMTSL3P82987 1691 aa30.75■■■□□ 2.51
IRF3-221ENST00000598808 BCORL1Q5H9F3 1711 aa30.75■■■□□ 2.51
IRF3-221ENST00000598808 CROCC2H7BZ55 1655 aa30.75■■■□□ 2.51
IRF3-221ENST00000598808 DAPK1P53355 1430 aa30.74■■■□□ 2.51
IRF3-221ENST00000598808 ABCC5O15440 1437 aa30.73■■■□□ 2.51
IRF3-221ENST00000598808 RTEL1-TNFRSF6BF6WH68 1400 aa30.72■■■□□ 2.51
IRF3-221ENST00000598808 MLECQ14165 292 aa30.7■■■□□ 2.5
IRF3-221ENST00000598808 MAST1Q9Y2H9 1570 aa30.69■■■□□ 2.5
IRF3-221ENST00000598808 ADGBQ8N7X0 1667 aa30.69■■■□□ 2.5
IRF3-221ENST00000598808 ITGAEP38570 1179 aa30.69■■■□□ 2.5
IRF3-221ENST00000598808 SHANK2Q9UPX8 1470 aa30.67■■■□□ 2.5
IRF3-221ENST00000598808 CHIC2Q9UKJ5 165 aa30.67■■■□□ 2.5
IRF3-221ENST00000598808 A2MP01023 1474 aa30.67■■■□□ 2.5
IRF3-221ENST00000598808 REREQ9P2R6 1566 aa30.66■■■□□ 2.5
IRF3-221ENST00000598808 MADDQ8WXG6 1647 aa30.65■■■□□ 2.5
IRF3-221ENST00000598808 RRBP1Q9P2E9 1410 aaKnown RBP30.64■■■□□ 2.49
IRF3-221ENST00000598808 PLXNC1O60486 1568 aa30.6■■■□□ 2.49
IRF3-221ENST00000598808 PTPRMP28827 1452 aa30.58■■■□□ 2.49
IRF3-221ENST00000598808 RRP7BPQ9NSQ0 103 aa30.57■■■□□ 2.48
IRF3-221ENST00000598808 ANKRD30AQ9BXX3 1397 aa30.56■■■□□ 2.48
IRF3-221ENST00000598808 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.56■■■□□ 2.483e-6■□□□□ 11.3
IRF3-221ENST00000598808 KIF15Q9NS87 1388 aa30.56■■■□□ 2.48
IRF3-221ENST00000598808 AGLP35573 1532 aa30.56■■■□□ 2.48
IRF3-221ENST00000598808 DHX29Q7Z478 1369 aaKnown RBP30.55■■■□□ 2.48
IRF3-221ENST00000598808 RIMS1Q86UR5 1692 aaKnown RBP30.54■■■□□ 2.48
IRF3-221ENST00000598808 DUOX2Q9NRD8 1548 aa30.51■■■□□ 2.47
IRF3-221ENST00000598808 PTPRKQ15262 1439 aa30.5■■■□□ 2.47
IRF3-221ENST00000598808 FER1L4A9Z1Z3 1794 aa30.5■■■□□ 2.47
IRF3-221ENST00000598808 KIF3BO15066 747 aa30.49■■■□□ 2.47
IRF3-221ENST00000598808 GGT6Q6P531 493 aa30.48■■■□□ 2.47
IRF3-221ENST00000598808 ESF1Q9H501 851 aaKnown RBP30.48■■■□□ 2.47
IRF3-221ENST00000598808 ADGRL2O95490 1459 aa30.48■■■□□ 2.47
IRF3-221ENST00000598808 NCOA1Q15788 1441 aa30.46■■■□□ 2.47
IRF3-221ENST00000598808 PLPPR3Q6T4P5 718 aa30.46■■■□□ 2.47
IRF3-221ENST00000598808 EIF2AK4Q9P2K8 1649 aaKnown RBP30.41■■■□□ 2.46
IRF3-221ENST00000598808 ERBINQ96RT1 1412 aa30.41■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 150.2 ms