RNA–Protein interactions for RNA: ENST00000598580.1

GRAMD1A-209, Transcript of GRAM domain containing 1A, humanhuman

TSL 3

Gene GRAMD1A, Length 400 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-209ENST00000598580 KIF14Q15058 1648 aa18.22■□□□□ 0.51
GRAMD1A-209ENST00000598580 ZFYVE16Q7Z3T8 1539 aa18.22■□□□□ 0.51
GRAMD1A-209ENST00000598580 PLPPR3Q6T4P5 718 aa18.21■□□□□ 0.51
GRAMD1A-209ENST00000598580 AFAP1Q8N556 730 aa18.21■□□□□ 0.51
GRAMD1A-209ENST00000598580 CFAP74Q9C0B2 1584 aa18.21■□□□□ 0.51
GRAMD1A-209ENST00000598580 MAGI2Q86UL8 1455 aa18.2■□□□□ 0.5
GRAMD1A-209ENST00000598580 TROQ12816 1431 aaPredicted RBP18.2■□□□□ 0.5
GRAMD1A-209ENST00000598580 HSPA2P54652 639 aa18.19■□□□□ 0.5
GRAMD1A-209ENST00000598580 CDK11AQ9UQ88 783 aaPredicted RBP18.19■□□□□ 0.5
GRAMD1A-209ENST00000598580 RIMS1Q86UR5 1692 aaKnown RBP18.18■□□□□ 0.5
GRAMD1A-209ENST00000598580 PCF11O94913 1555 aaKnown RBP18.17■□□□□ 0.5
GRAMD1A-209ENST00000598580 LRRIQ1Q96JM4 1722 aa18.17■□□□□ 0.5
GRAMD1A-209ENST00000598580 ATP10AO60312 1499 aa18.16■□□□□ 0.5
GRAMD1A-209ENST00000598580 CEBPAP49715 358 aaPredicted RBP18.13■□□□□ 0.49
GRAMD1A-209ENST00000598580 CASKIN1Q8WXD9 1431 aa18.13■□□□□ 0.49
GRAMD1A-209ENST00000598580 ARHGEF12Q9NZN5 1544 aa18.12■□□□□ 0.49
GRAMD1A-209ENST00000598580 FBXO41Q8TF61 875 aa18.11■□□□□ 0.49
GRAMD1A-209ENST00000598580 MYO5CQ9NQX4 1742 aa18.11■□□□□ 0.49
GRAMD1A-209ENST00000598580 ARHGAP5Q13017 1502 aa18.1■□□□□ 0.49
GRAMD1A-209ENST00000598580 C9orf84Q5VXU9 1444 aa18.1■□□□□ 0.49
GRAMD1A-209ENST00000598580 TRAPPC8Q9Y2L5 1435 aa18.1■□□□□ 0.49
GRAMD1A-209ENST00000598580 CLIP1P30622 1438 aa18.08■□□□□ 0.49
GRAMD1A-209ENST00000598580 KDM5CP41229 1560 aa18.08■□□□□ 0.48
GRAMD1A-209ENST00000598580 ZNF518AQ6AHZ1 1483 aa18.07■□□□□ 0.48
GRAMD1A-209ENST00000598580 CDC42BPBQ9Y5S2 1711 aa18.06■□□□□ 0.48
GRAMD1A-209ENST00000598580 MLH3Q9UHC1 1453 aa18.03■□□□□ 0.48
GRAMD1A-209ENST00000598580 DIP2CQ9Y2E4 1556 aa18.03■□□□□ 0.48
GRAMD1A-209ENST00000598580 FER1L4A9Z1Z3 1794 aa18.02■□□□□ 0.48
GRAMD1A-209ENST00000598580 MYT1LQ9UL68 1186 aa18.02■□□□□ 0.48
GRAMD1A-209ENST00000598580 CCDC18Q5T9S5 1454 aa18.01■□□□□ 0.47
GRAMD1A-209ENST00000598580 ABCC1P33527 1531 aa18■□□□□ 0.47
GRAMD1A-209ENST00000598580 PREX2Q70Z35 1606 aa17.99■□□□□ 0.47
GRAMD1A-209ENST00000598580 ABCA6Q8N139 1617 aa17.99■□□□□ 0.47
GRAMD1A-209ENST00000598580 ZNF777Q9ULD5 760 aaPredicted RBP17.99■□□□□ 0.47
GRAMD1A-209ENST00000598580 FYCO1Q9BQS8 1478 aa17.99■□□□□ 0.47
GRAMD1A-209ENST00000598580 GPATCH8Q9UKJ3 1502 aaKnown RBP17.98■□□□□ 0.47
GRAMD1A-209ENST00000598580 HNRNPMP52272 730 aaKnown RBP eCLIP17.97■□□□□ 0.47
GRAMD1A-209ENST00000598580 REREQ9P2R6 1566 aa17.96■□□□□ 0.47
GRAMD1A-209ENST00000598580 CDC42BPAQ5VT25 1732 aa17.95■□□□□ 0.46
GRAMD1A-209ENST00000598580 AGLP35573 1532 aa17.94■□□□□ 0.46
GRAMD1A-209ENST00000598580 ITSN2Q9NZM3 1697 aa17.94■□□□□ 0.46
GRAMD1A-209ENST00000598580 CERKQ8TCT0 537 aa17.94■□□□□ 0.46
GRAMD1A-209ENST00000598580 KIDINS220Q9ULH0 1771 aa17.94■□□□□ 0.46
GRAMD1A-209ENST00000598580 SAMD9LQ8IVG5 1584 aa17.93■□□□□ 0.46
GRAMD1A-209ENST00000598580 ZNF644Q9H582 1327 aaPredicted RBP17.92■□□□□ 0.46
GRAMD1A-209ENST00000598580 CFDP1Q9UEE9 299 aaPredicted RBP17.9■□□□□ 0.46
GRAMD1A-209ENST00000598580 SPAG9O60271 1321 aaKnown RBP17.9■□□□□ 0.46
GRAMD1A-209ENST00000598580 SYCP2Q9BX26 1530 aa17.89■□□□□ 0.45
GRAMD1A-209ENST00000598580 PREX1Q8TCU6 1659 aa17.88■□□□□ 0.45
GRAMD1A-209ENST00000598580 STRCQ7RTU9 1775 aa17.88■□□□□ 0.45
GRAMD1A-209ENST00000598580 UHRF1BP1Q6BDS2 1440 aa17.87■□□□□ 0.45
GRAMD1A-209ENST00000598580 KIAA1107Q9UPP5 1409 aa17.87■□□□□ 0.45
GRAMD1A-209ENST00000598580 C3P01024 1663 aa17.87■□□□□ 0.45
GRAMD1A-209ENST00000598580 CCNB3Q8WWL7 1395 aa17.86■□□□□ 0.45
GRAMD1A-209ENST00000598580 SETD1BQ9UPS6 1966 aaKnown RBP17.85■□□□□ 0.45
GRAMD1A-209ENST00000598580 ZMYM3Q14202 1370 aa17.83■□□□□ 0.45
GRAMD1A-209ENST00000598580 MTUS2Q5JR59 1369 aa17.83■□□□□ 0.45
GRAMD1A-209ENST00000598580 ESF1Q9H501 851 aaKnown RBP17.83■□□□□ 0.44
GRAMD1A-209ENST00000598580 MBD5Q9P267 1494 aa17.82■□□□□ 0.44
GRAMD1A-209ENST00000598580 DMRT2Q9Y5R5 561 aa17.81■□□□□ 0.44
GRAMD1A-209ENST00000598580 ATP7AQ04656 1500 aa17.81■□□□□ 0.44
GRAMD1A-209ENST00000598580 CNTLNQ9NXG0 1405 aa17.81■□□□□ 0.44
GRAMD1A-209ENST00000598580 A2MP01023 1474 aa17.8■□□□□ 0.44
GRAMD1A-209ENST00000598580 CEP162Q5TB80 1403 aa17.8■□□□□ 0.44
GRAMD1A-209ENST00000598580 PLEKHH2Q8IVE3 1493 aa17.79■□□□□ 0.44
GRAMD1A-209ENST00000598580 PLXNC1O60486 1568 aa17.79■□□□□ 0.44
GRAMD1A-209ENST00000598580 TIAM1Q13009 1591 aa17.79■□□□□ 0.44
GRAMD1A-209ENST00000598580 INO80Q9ULG1 1556 aaPredicted RBP17.79■□□□□ 0.44
GRAMD1A-209ENST00000598580 GGT6Q6P531 493 aa17.78■□□□□ 0.44
GRAMD1A-209ENST00000598580 PTPRTO14522 1441 aa17.78■□□□□ 0.44
GRAMD1A-209ENST00000598580 LOC105371045A0A1W2PR82 267 aa17.77■□□□□ 0.44
GRAMD1A-209ENST00000598580 NCOA1Q15788 1441 aa17.77■□□□□ 0.44
GRAMD1A-209ENST00000598580 SUPT6HQ7KZ85 1726 aaKnown RBP17.77■□□□□ 0.44
GRAMD1A-209ENST00000598580 NCKAP5LQ9HCH0 1330 aa17.75■□□□□ 0.43
GRAMD1A-209ENST00000598580 NPATQ14207 1427 aa17.75■□□□□ 0.43
GRAMD1A-209ENST00000598580 PTPRKQ15262 1439 aa17.75■□□□□ 0.43
GRAMD1A-209ENST00000598580 EHBP1L1Q8N3D4 1523 aa17.72■□□□□ 0.43
GRAMD1A-209ENST00000598580 LTBP4Q8N2S1 1624 aa17.72■□□□□ 0.43
GRAMD1A-209ENST00000598580 DHX29Q7Z478 1369 aaKnown RBP17.71■□□□□ 0.43
GRAMD1A-209ENST00000598580 MROH2AA6NES4 1674 aa17.71■□□□□ 0.42
GRAMD1A-209ENST00000598580 NCOA2Q15596 1464 aa17.7■□□□□ 0.42
GRAMD1A-209ENST00000598580 CAMSAP1Q5T5Y3 1602 aa17.7■□□□□ 0.42
GRAMD1A-209ENST00000598580 RTEL1-TNFRSF6BF6WH68 1400 aa17.7■□□□□ 0.42
GRAMD1A-209ENST00000598580 CLTCQ00610 1675 aaKnown RBP17.7■□□□□ 0.42
GRAMD1A-209ENST00000598580 FBXO31Q5XUX0 539 aaPredicted RBP17.69■□□□□ 0.42
GRAMD1A-209ENST00000598580 PPP6R1Q9UPN7 881 aa17.68■□□□□ 0.42
GRAMD1A-209ENST00000598580 KANK4Q5T7N3 995 aaPredicted RBP17.67■□□□□ 0.42
GRAMD1A-209ENST00000598580 KIF3BO15066 747 aa17.66■□□□□ 0.42
GRAMD1A-209ENST00000598580 ZNF335Q9H4Z2 1342 aaPredicted RBP17.66■□□□□ 0.42
GRAMD1A-209ENST00000598580 CAMSAP2Q08AD1 1489 aa17.65■□□□□ 0.42
GRAMD1A-209ENST00000598580 ADGBQ8N7X0 1667 aa17.64■□□□□ 0.41
GRAMD1A-209ENST00000598580 CCDC141Q6ZP82 1450 aa17.63■□□□□ 0.41
GRAMD1A-209ENST00000598580 TCOF1Q13428 1488 aaKnown RBP17.63■□□□□ 0.41
GRAMD1A-209ENST00000598580 MYO3AQ8NEV4 1616 aa17.62■□□□□ 0.41
GRAMD1A-209ENST00000598580 PKD2Q13563 968 aa17.61■□□□□ 0.41
GRAMD1A-209ENST00000598580 RSPH4AQ5TD94 716 aa17.61■□□□□ 0.41
GRAMD1A-209ENST00000598580 PLA2R1Q13018 1463 aa17.61■□□□□ 0.41
GRAMD1A-209ENST00000598580 CEP170BQ9Y4F5 1589 aaPredicted RBP17.61■□□□□ 0.41
GRAMD1A-209ENST00000598580 VPS8Q8N3P4 1428 aa17.6■□□□□ 0.41
GRAMD1A-209ENST00000598580 LRRC9Q6ZRR7 1453 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms