RNA–Protein interactions for RNA: ENST00000597477.5

PIK3C3-216, Transcript of phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

TSL 2

Gene PIK3C3, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3-216ENST00000597477 ZNF687Q8N1G0 1237 aa12.09□□□□□ -0.47
PIK3C3-216ENST00000597477 RNF166Q96A37 237 aaPredicted RBP12.09□□□□□ -0.47
PIK3C3-216ENST00000597477 RIMBP2O15034 1052 aa12.08□□□□□ -0.48
PIK3C3-216ENST00000597477 FBXO22Q8NEZ5 403 aa12.05□□□□□ -0.48
PIK3C3-216ENST00000597477 VGFO15240 615 aaPredicted RBP12.02□□□□□ -0.49
PIK3C3-216ENST00000597477 KHSRPQ92945 711 aaKnown RBP eCLIP12.02□□□□□ -0.49
PIK3C3-216ENST00000597477 MYT1LQ9UL68 1186 aa12.02□□□□□ -0.49
PIK3C3-216ENST00000597477 ARSIQ5FYB1 569 aa12.01□□□□□ -0.49
PIK3C3-216ENST00000597477 KIF3CO14782 793 aa11.98□□□□□ -0.49
PIK3C3-216ENST00000597477 ZNF316A6NFI3 1004 aaPredicted RBP11.94□□□□□ -0.5
PIK3C3-216ENST00000597477 MFRPQ9BY79 579 aa11.94□□□□□ -0.5
PIK3C3-216ENST00000597477 POTEEQ6S8J3 1075 aa11.93□□□□□ -0.5
PIK3C3-216ENST00000597477 BCL11BQ9C0K0 894 aaPredicted RBP11.91□□□□□ -0.5
PIK3C3-216ENST00000597477 NLRP6P59044 892 aa11.9□□□□□ -0.5
PIK3C3-216ENST00000597477 PTGER2P43116 358 aa11.89□□□□□ -0.51
PIK3C3-216ENST00000597477 LSM11P83369 360 aaKnown RBP eCLIP11.88□□□□□ -0.51
PIK3C3-216ENST00000597477 C2orf72A6NCS6 295 aa11.87□□□□□ -0.51
PIK3C3-216ENST00000597477 ANKRD13DQ6ZTN6 518 aa11.85□□□□□ -0.51
PIK3C3-216ENST00000597477 NUDT7P0C024 238 aa11.83□□□□□ -0.52
PIK3C3-216ENST00000597477 STK24Q9Y6E0 443 aa11.82□□□□□ -0.52
PIK3C3-216ENST00000597477 SLC34A2O95436 690 aa11.8□□□□□ -0.52
PIK3C3-216ENST00000597477 LHX6Q9UPM6 363 aa11.8□□□□□ -0.52
PIK3C3-216ENST00000597477 PCDHGA4Q9Y5G9 962 aa11.79□□□□□ -0.52
PIK3C3-216ENST00000597477 KDM4FA0A1W2PPD8 638 aa11.78□□□□□ -0.52
PIK3C3-216ENST00000597477 AXIN2Q9Y2T1 843 aa11.78□□□□□ -0.52
PIK3C3-216ENST00000597477 PBX2P40425 430 aa11.76□□□□□ -0.53
PIK3C3-216ENST00000597477 STK25O00506 426 aa11.74□□□□□ -0.53
PIK3C3-216ENST00000597477 PPP1R37O75864 691 aa11.73□□□□□ -0.53
PIK3C3-216ENST00000597477 RGL2O15211 777 aa11.7□□□□□ -0.54
PIK3C3-216ENST00000597477 PKD2Q13563 968 aa11.69□□□□□ -0.54
PIK3C3-216ENST00000597477 TAOK2Q9UL54 1235 aa11.68□□□□□ -0.54
PIK3C3-216ENST00000597477 ADGRD1Q6QNK2 874 aa11.66□□□□□ -0.54
PIK3C3-216ENST00000597477 ECM2O94769 699 aaPredicted RBP11.65□□□□□ -0.54
PIK3C3-216ENST00000597477 HRO43593 1189 aa11.64□□□□□ -0.55
PIK3C3-216ENST00000597477 DMRTA1Q5VZB9 504 aa11.63□□□□□ -0.55
PIK3C3-216ENST00000597477 TMC2Q8TDI7 906 aa11.63□□□□□ -0.55
PIK3C3-216ENST00000597477 ARHGAP33O14559 1287 aa11.62□□□□□ -0.55
PIK3C3-216ENST00000597477 PTCD2Q8WV60 388 aaKnown RBP11.62□□□□□ -0.55
PIK3C3-216ENST00000597477 PLA2G2EQ9NZK7 142 aa11.62□□□□□ -0.55
PIK3C3-216ENST00000597477 PSEN2P49810 448 aa11.59□□□□□ -0.55
PIK3C3-216ENST00000597477 HCSTQ9UBK5 93 aa11.58□□□□□ -0.56
PIK3C3-216ENST00000597477 TK2O00142 265 aa11.56□□□□□ -0.56
PIK3C3-216ENST00000597477 FOXK1P85037 733 aa11.56□□□□□ -0.56
PIK3C3-216ENST00000597477 PSDA5PKW4 1024 aaPredicted RBP11.54□□□□□ -0.56
PIK3C3-216ENST00000597477 PLPP6Q8IY26 295 aa11.52□□□□□ -0.57
PIK3C3-216ENST00000597477 DSG2Q14126 1118 aa11.51□□□□□ -0.57
PIK3C3-216ENST00000597477 GPHNQ9NQX3 736 aaPredicted RBP11.51□□□□□ -0.57
PIK3C3-216ENST00000597477 PPP4R3BQ5MIZ7 849 aa11.44□□□□□ -0.58
PIK3C3-216ENST00000597477 KCTD12Q96CX2 325 aaKnown RBP11.44□□□□□ -0.58
PIK3C3-216ENST00000597477 OXER1Q8TDS5 423 aa11.43□□□□□ -0.58
PIK3C3-216ENST00000597477 HS6ST3Q8IZP7 471 aa11.42□□□□□ -0.58
PIK3C3-216ENST00000597477 KCNK17Q96T54 332 aa11.41□□□□□ -0.58
PIK3C3-216ENST00000597477 VPS9D1Q9Y2B5 631 aa11.41□□□□□ -0.58
PIK3C3-216ENST00000597477 NKX1-1Q15270 411 aaPredicted RBP11.38□□□□□ -0.59
PIK3C3-216ENST00000597477 BHMG1C9JSJ3 638 aaPredicted RBP11.36□□□□□ -0.59
PIK3C3-216ENST00000597477 CRISPLD2Q9H0B8 497 aa11.36□□□□□ -0.59
PIK3C3-216ENST00000597477 SLC4A5Q9BY07 1137 aa11.34□□□□□ -0.59
PIK3C3-216ENST00000597477 BCL2L12Q9HB09 334 aa11.34□□□□□ -0.59
PIK3C3-216ENST00000597477 TBC1D12O60347 775 aa11.33□□□□□ -0.6
PIK3C3-216ENST00000597477 DNAJC5Q9H3Z4 198 aa11.33□□□□□ -0.6
PIK3C3-216ENST00000597477 FOSBP53539 338 aa11.32□□□□□ -0.6
PIK3C3-216ENST00000597477 IFFO2Q5TF58 517 aa11.31□□□□□ -0.6
PIK3C3-216ENST00000597477 UPF1Q92900 1129 aaKnown RBP eCLIP11.31□□□□□ -0.6
PIK3C3-216ENST00000597477 ZNF454Q8N9F8 522 aa11.3□□□□□ -0.6
PIK3C3-216ENST00000597477 ZBED2Q9BTP6 218 aa11.3□□□□□ -0.6
PIK3C3-216ENST00000597477 NCKAP5LQ9HCH0 1330 aa11.3□□□□□ -0.6
PIK3C3-216ENST00000597477 THSD4Q6ZMP0 1018 aa11.29□□□□□ -0.6
PIK3C3-216ENST00000597477 PTPN5P54829 565 aa11.28□□□□□ -0.6
PIK3C3-216ENST00000597477 ANO8Q9HCE9 1232 aaPredicted RBP11.27□□□□□ -0.61
PIK3C3-216ENST00000597477 PPP1R15BQ5SWA1 713 aa11.26□□□□□ -0.61
PIK3C3-216ENST00000597477 A0A0G2JS52 829 aa11.23□□□□□ -0.61
PIK3C3-216ENST00000597477 JPH4Q96JJ6 628 aa11.23□□□□□ -0.61
PIK3C3-216ENST00000597477 ADAM33Q9BZ11 813 aa11.23□□□□□ -0.61
PIK3C3-216ENST00000597477 CHGAP10645 457 aaKnown RBP11.22□□□□□ -0.61
PIK3C3-216ENST00000597477 KCNH8Q96L42 1107 aa11.22□□□□□ -0.61
PIK3C3-216ENST00000597477 RGS20O76081 388 aa11.21□□□□□ -0.61
PIK3C3-216ENST00000597477 PTPREP23469 700 aa11.21□□□□□ -0.61
PIK3C3-216ENST00000597477 STAC3Q96MF2 364 aa11.21□□□□□ -0.61
PIK3C3-216ENST00000597477 EVI5O60447 810 aa11.17□□□□□ -0.62
PIK3C3-216ENST00000597477 WNT2BQ93097 391 aa11.17□□□□□ -0.62
PIK3C3-216ENST00000597477 ZDHHC16Q969W1 377 aa11.16□□□□□ -0.62
PIK3C3-216ENST00000597477 MRPL50Q8N5N7 158 aaKnown RBP11.15□□□□□ -0.62
PIK3C3-216ENST00000597477 EMILIN3Q9NT22 766 aa11.13□□□□□ -0.63
PIK3C3-216ENST00000597477 MFSD10Q14728 455 aa11.12□□□□□ -0.63
PIK3C3-216ENST00000597477 COL9A1P20849 921 aa11.11□□□□□ -0.63
PIK3C3-216ENST00000597477 PROX2Q3B8N5 592 aa11.11□□□□□ -0.63
PIK3C3-216ENST00000597477 IRX2Q9BZI1 471 aaPredicted RBP11.11□□□□□ -0.63
PIK3C3-216ENST00000597477 PCDHGA10Q9Y5H3 936 aa11.11□□□□□ -0.63
PIK3C3-216ENST00000597477 GTPBP6O43824 516 aaPredicted RBP11.1□□□□□ -0.63
PIK3C3-216ENST00000597477 ITGBL1O95965 494 aaPredicted RBP11.1□□□□□ -0.63
PIK3C3-216ENST00000597477 PDE4AP27815 886 aa11.1□□□□□ -0.63
PIK3C3-216ENST00000597477 PPP1R3GB7ZBB8 358 aa11.09□□□□□ -0.63
PIK3C3-216ENST00000597477 NBPF3Q9H094 633 aa11.08□□□□□ -0.64
PIK3C3-216ENST00000597477 RABGEF1Q9UJ41 708 aa11.07□□□□□ -0.64
PIK3C3-216ENST00000597477 GOLGA8CPA6NN73 597 aa11.06□□□□□ -0.64
PIK3C3-216ENST00000597477 DDX27Q96GQ7 796 aaKnown RBP11.06□□□□□ -0.64
PIK3C3-216ENST00000597477 LARP6Q9BRS8 491 aaKnown RBP11.06□□□□□ -0.64
PIK3C3-216ENST00000597477 RYDENQ9NUL5 291 aaKnown RBP11.06□□□□□ -0.64
PIK3C3-216ENST00000597477 BCAMP50895 628 aa11.04□□□□□ -0.64
PIK3C3-216ENST00000597477 CADPS2Q86UW7 1296 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms