RNA–Protein interactions for RNA: ENST00000596338.5

TRPM4-207, Transcript of transient receptor potential cation channel subfamily M member 4, humanhuman

TSL 2

Gene TRPM4, Length 3,993 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM4-207ENST00000596338 PRG4Q92954 1404 aaPredicted RBP20.44■□□□□ 0.86
TRPM4-207ENST00000596338 MAGI3Q5TCQ9 1506 aa20.43■□□□□ 0.86
TRPM4-207ENST00000596338 SAMD9Q5K651 1589 aa20.43■□□□□ 0.86
TRPM4-207ENST00000596338 THOC2Q8NI27 1593 aaKnown RBP20.42■□□□□ 0.86
TRPM4-207ENST00000596338 UGGT2Q9NYU1 1516 aa20.42■□□□□ 0.86
TRPM4-207ENST00000596338 NBPF8Q3BBV2 869 aa20.42■□□□□ 0.86
TRPM4-207ENST00000596338 IFT140Q96RY7 1462 aa20.42■□□□□ 0.86
TRPM4-207ENST00000596338 RGL3Q3MIN7 710 aa20.41■□□□□ 0.86
TRPM4-207ENST00000596338 HNRNPMP52272 730 aaKnown RBP eCLIP20.41■□□□□ 0.86
TRPM4-207ENST00000596338 CARMIL2Q6F5E8 1435 aa20.41■□□□□ 0.86
TRPM4-207ENST00000596338 MIA2Q96PC5 1412 aa20.39■□□□□ 0.86
TRPM4-207ENST00000596338 KIAA0586Q9BVV6 1533 aa20.38■□□□□ 0.85
TRPM4-207ENST00000596338 TARBP1Q13395 1621 aaKnown RBP20.38■□□□□ 0.85
TRPM4-207ENST00000596338 C11orf95C9JLR9 678 aaPredicted RBP20.37■□□□□ 0.85
TRPM4-207ENST00000596338 DAPK1P53355 1430 aa20.36■□□□□ 0.85
TRPM4-207ENST00000596338 CCDC184Q52MB2 194 aa20.36■□□□□ 0.85
TRPM4-207ENST00000596338 CARD11Q9BXL7 1154 aa20.36■□□□□ 0.85
TRPM4-207ENST00000596338 NUP155O75694 1391 aa20.36■□□□□ 0.85
TRPM4-207ENST00000596338 PLB1Q6P1J6 1458 aa20.35■□□□□ 0.85
TRPM4-207ENST00000596338 MYT1Q01538 1121 aa20.34■□□□□ 0.85
TRPM4-207ENST00000596338 DCAF11Q8TEB1 546 aa20.34■□□□□ 0.85
TRPM4-207ENST00000596338 SALL2Q9Y467 1007 aaPredicted RBP20.34■□□□□ 0.85
TRPM4-207ENST00000596338 ANKRD30AQ9BXX3 1397 aa20.33■□□□□ 0.84
TRPM4-207ENST00000596338 ABCC5O15440 1437 aa20.32■□□□□ 0.84
TRPM4-207ENST00000596338 ADAMTS12P58397 1594 aa20.32■□□□□ 0.84
TRPM4-207ENST00000596338 PRKRIP1Q9H875 184 aaPredicted RBP20.32■□□□□ 0.84
TRPM4-207ENST00000596338 GRIN2AQ12879 1464 aa20.31■□□□□ 0.84
TRPM4-207ENST00000596338 ERICH6Q7L0X2 663 aa20.31■□□□□ 0.84
TRPM4-207ENST00000596338 PBRM1Q86U86 1689 aa20.3■□□□□ 0.84
TRPM4-207ENST00000596338 TMC1Q8TDI8 760 aa20.3■□□□□ 0.84
TRPM4-207ENST00000596338 CCDC7Q96M83 1385 aa20.28■□□□□ 0.84
TRPM4-207ENST00000596338 KIF7Q2M1P5 1343 aa20.28■□□□□ 0.84
TRPM4-207ENST00000596338 NUP153P49790 1475 aaKnown RBP20.27■□□□□ 0.84
TRPM4-207ENST00000596338 TROQ12816 1431 aaPredicted RBP20.27■□□□□ 0.84
TRPM4-207ENST00000596338 WDR62O43379 1518 aa20.27■□□□□ 0.84
TRPM4-207ENST00000596338 LRRIQ1Q96JM4 1722 aa20.27■□□□□ 0.83
TRPM4-207ENST00000596338 ANKRD30BQ9BXX2 1392 aa20.26■□□□□ 0.83
TRPM4-207ENST00000596338 TCOF1Q13428 1488 aaKnown RBP20.25■□□□□ 0.83
TRPM4-207ENST00000596338 KDM6BO15054 1643 aa20.25■□□□□ 0.83
TRPM4-207ENST00000596338 DISP1Q96F81 1524 aa20.23■□□□□ 0.83
TRPM4-207ENST00000596338 CNTLNQ9NXG0 1405 aa20.22■□□□□ 0.83
TRPM4-207ENST00000596338 ROCK1Q13464 1354 aa20.21■□□□□ 0.83
TRPM4-207ENST00000596338 ANKRD50Q9ULJ7 1429 aa20.21■□□□□ 0.83
TRPM4-207ENST00000596338 PTPRGP23470 1445 aa20.2■□□□□ 0.82
TRPM4-207ENST00000596338 USP47Q96K76 1375 aa20.2■□□□□ 0.82
TRPM4-207ENST00000596338 B4GALNT3Q6L9W6 998 aa20.19■□□□□ 0.82
TRPM4-207ENST00000596338 RBM19Q9Y4C8 960 aaKnown RBP20.19■□□□□ 0.82
TRPM4-207ENST00000596338 CAMSAP2Q08AD1 1489 aa20.18■□□□□ 0.82
TRPM4-207ENST00000596338 KIAA0556O60303 1618 aa20.18■□□□□ 0.82
TRPM4-207ENST00000596338 ST20-MTHFSA0A0A6YYL1 179 aa20.18■□□□□ 0.82
TRPM4-207ENST00000596338 AKNAQ7Z591 1439 aa20.17■□□□□ 0.82
TRPM4-207ENST00000596338 RAPGEF6Q8TEU7 1601 aa20.16■□□□□ 0.82
TRPM4-207ENST00000596338 NCOA1Q15788 1441 aa20.16■□□□□ 0.82
TRPM4-207ENST00000596338 SYNJ2O15056 1496 aa20.16■□□□□ 0.82
TRPM4-207ENST00000596338 ARHGEF11O15085 1522 aa20.16■□□□□ 0.82
TRPM4-207ENST00000596338 RPRD2Q5VT52 1461 aaKnown RBP20.14■□□□□ 0.81
TRPM4-207ENST00000596338 GPATCH8Q9UKJ3 1502 aaKnown RBP20.13■□□□□ 0.81
TRPM4-207ENST00000596338 EIF4G3O43432 1585 aaKnown RBP20.13■□□□□ 0.81
TRPM4-207ENST00000596338 KIF15Q9NS87 1388 aa20.13■□□□□ 0.81
TRPM4-207ENST00000596338 KIAA1107Q9UPP5 1409 aa20.12■□□□□ 0.81
TRPM4-207ENST00000596338 MAGI1Q96QZ7 1491 aaPredicted RBP20.11■□□□□ 0.81
TRPM4-207ENST00000596338 DENND4BO75064 1496 aaPredicted RBP20.1■□□□□ 0.81
TRPM4-207ENST00000596338 PPP4R2Q9NY27 417 aa20.1■□□□□ 0.81
TRPM4-207ENST00000596338 C9orf84Q5VXU9 1444 aa20.1■□□□□ 0.81
TRPM4-207ENST00000596338 ROCK2O75116 1388 aaKnown RBP20.09■□□□□ 0.81
TRPM4-207ENST00000596338 CC2D1BQ5T0F9 858 aaKnown RBP20.07■□□□□ 0.8
TRPM4-207ENST00000596338 CCDC136Q96JN2 1154 aa20.06■□□□□ 0.8
TRPM4-207ENST00000596338 GCC2Q8IWJ2 1684 aa20.05■□□□□ 0.8
TRPM4-207ENST00000596338 ZBED9Q6R2W3 1325 aa20.03■□□□□ 0.8
TRPM4-207ENST00000596338 ANP32EQ9BTT0 268 aa20.03■□□□□ 0.8
TRPM4-207ENST00000596338 DNMT1P26358 1616 aaKnown RBP20.03■□□□□ 0.8
TRPM4-207ENST00000596338 ATP10BO94823 1461 aa20.02■□□□□ 0.8
TRPM4-207ENST00000596338 CEP170Q5SW79 1584 aa20.01■□□□□ 0.79
TRPM4-207ENST00000596338 KIF14Q15058 1648 aa20.01■□□□□ 0.79
TRPM4-207ENST00000596338 NBPF1Q3BBV0 1214 aa20■□□□□ 0.79
TRPM4-207ENST00000596338 PZPP20742 1482 aa20■□□□□ 0.79
TRPM4-207ENST00000596338 KDM5BQ9UGL1 1544 aa20■□□□□ 0.79
TRPM4-207ENST00000596338 CHGAP10645 457 aaKnown RBP19.99■□□□□ 0.79
TRPM4-207ENST00000596338 CCDC144AA2RUR9 1427 aa19.99■□□□□ 0.79
TRPM4-207ENST00000596338 RSPH4AQ5TD94 716 aa19.98■□□□□ 0.79
TRPM4-207ENST00000596338 TEX14Q8IWB6 1497 aa19.97■□□□□ 0.79
TRPM4-207ENST00000596338 EFCAB2Q5VUJ9 269 aa19.96■□□□□ 0.79
TRPM4-207ENST00000596338 NUDCQ9Y266 331 aa19.94■□□□□ 0.78
TRPM4-207ENST00000596338 SENP3Q9H4L4 574 aaPredicted RBP19.93■□□□□ 0.78
TRPM4-207ENST00000596338 ARHGAP5Q13017 1502 aa19.91■□□□□ 0.78
TRPM4-207ENST00000596338 NUP160Q12769 1436 aa19.91■□□□□ 0.78
TRPM4-207ENST00000596338 TMF1P82094 1093 aa19.89■□□□□ 0.78
TRPM4-207ENST00000596338 ITSN2Q9NZM3 1697 aa19.89■□□□□ 0.77
TRPM4-207ENST00000596338 AFAP1Q8N556 730 aa19.89■□□□□ 0.77
TRPM4-207ENST00000596338 RALBP1Q15311 655 aa19.89■□□□□ 0.77
TRPM4-207ENST00000596338 KTN1Q86UP2 1357 aaKnown RBP19.88■□□□□ 0.77
TRPM4-207ENST00000596338 MYBBP1AQ9BQG0 1328 aaKnown RBP19.87■□□□□ 0.77
TRPM4-207ENST00000596338 PANK3Q9H999 370 aa19.87■□□□□ 0.77
TRPM4-207ENST00000596338 SPAG9O60271 1321 aaKnown RBP19.87■□□□□ 0.77
TRPM4-207ENST00000596338 PNISRQ8TF01 805 aaKnown RBP19.87■□□□□ 0.77
TRPM4-207ENST00000596338 ERICH6BQ5W0A0 696 aa19.86■□□□□ 0.77
TRPM4-207ENST00000596338 NPM2Q86SE8 214 aaKnown RBP19.86■□□□□ 0.77
TRPM4-207ENST00000596338 SPATA31E1Q6ZUB1 1445 aa19.86■□□□□ 0.77
TRPM4-207ENST00000596338 KNSTRNQ9Y448 316 aa19.85■□□□□ 0.77
TRPM4-207ENST00000596338 CCDC141Q6ZP82 1450 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms