RNA–Protein interactions for RNA: ENST00000596271.1

SAMD4B-204, Transcript of sterile alpha motif domain containing 4B, humanhuman

Gene SAMD4B, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD4B-204ENST00000596271 SCAPERQ9BY12 1400 aa19.29■□□□□ 0.68
SAMD4B-204ENST00000596271 MSH5O43196 834 aa19.29■□□□□ 0.68
SAMD4B-204ENST00000596271 CLIP1P30622 1438 aa19.28■□□□□ 0.68
SAMD4B-204ENST00000596271 ATP1B4Q9UN42 357 aaPredicted RBP19.26■□□□□ 0.67
SAMD4B-204ENST00000596271 ZFYVE16Q7Z3T8 1539 aa19.25■□□□□ 0.67
SAMD4B-204ENST00000596271 ATP10AO60312 1499 aa19.22■□□□□ 0.67
SAMD4B-204ENST00000596271 CASKIN1Q8WXD9 1431 aa19.22■□□□□ 0.67
SAMD4B-204ENST00000596271 CCDC18Q5T9S5 1454 aa19.22■□□□□ 0.67
SAMD4B-204ENST00000596271 YEATS2Q9ULM3 1422 aa19.21■□□□□ 0.67
SAMD4B-204ENST00000596271 KIF14Q15058 1648 aa19.21■□□□□ 0.67
SAMD4B-204ENST00000596271 MADDQ8WXG6 1647 aa19.21■□□□□ 0.67
SAMD4B-204ENST00000596271 ZNF518AQ6AHZ1 1483 aa19.21■□□□□ 0.67
SAMD4B-204ENST00000596271 MYO5CQ9NQX4 1742 aa19.19■□□□□ 0.66
SAMD4B-204ENST00000596271 PCF11O94913 1555 aaKnown RBP19.19■□□□□ 0.66
SAMD4B-204ENST00000596271 C9orf84Q5VXU9 1444 aa19.18■□□□□ 0.66
SAMD4B-204ENST00000596271 LMTK3Q96Q04 1460 aa19.16■□□□□ 0.66
SAMD4B-204ENST00000596271 FBXO41Q8TF61 875 aa19.14■□□□□ 0.65
SAMD4B-204ENST00000596271 EHMT2Q96KQ7 1210 aa19.14■□□□□ 0.65
SAMD4B-204ENST00000596271 MLH3Q9UHC1 1453 aa19.14■□□□□ 0.65
SAMD4B-204ENST00000596271 ARHGAP5Q13017 1502 aa19.14■□□□□ 0.65
SAMD4B-204ENST00000596271 KDM5CP41229 1560 aa19.14■□□□□ 0.65
SAMD4B-204ENST00000596271 AFAP1Q8N556 730 aa19.13■□□□□ 0.65
SAMD4B-204ENST00000596271 ARHGEF12Q9NZN5 1544 aa19.12■□□□□ 0.65
SAMD4B-204ENST00000596271 FYCO1Q9BQS8 1478 aa19.11■□□□□ 0.65
SAMD4B-204ENST00000596271 RIMS1Q86UR5 1692 aaKnown RBP19.11■□□□□ 0.65
SAMD4B-204ENST00000596271 REREQ9P2R6 1566 aa19.1■□□□□ 0.65
SAMD4B-204ENST00000596271 SETD1BQ9UPS6 1966 aaKnown RBP19.08■□□□□ 0.64
SAMD4B-204ENST00000596271 MLECQ14165 292 aa19.07■□□□□ 0.64
SAMD4B-204ENST00000596271 AGLP35573 1532 aa19.06■□□□□ 0.64
SAMD4B-204ENST00000596271 PREX2Q70Z35 1606 aa19.03■□□□□ 0.64
SAMD4B-204ENST00000596271 MYT1LQ9UL68 1186 aa19.03■□□□□ 0.64
SAMD4B-204ENST00000596271 DMRT2Q9Y5R5 561 aa19.03■□□□□ 0.64
SAMD4B-204ENST00000596271 FER1L4A9Z1Z3 1794 aa19.03■□□□□ 0.64
SAMD4B-204ENST00000596271 SIGLEC1Q9BZZ2 1709 aa19.03■□□□□ 0.64
SAMD4B-204ENST00000596271 CDC42BPBQ9Y5S2 1711 aa19.03■□□□□ 0.64
SAMD4B-204ENST00000596271 KIAA1107Q9UPP5 1409 aa19.02■□□□□ 0.64
SAMD4B-204ENST00000596271 ABCC1P33527 1531 aa19.02■□□□□ 0.64
SAMD4B-204ENST00000596271 LRRIQ1Q96JM4 1722 aa19.02■□□□□ 0.63
SAMD4B-204ENST00000596271 TRAPPC8Q9Y2L5 1435 aa19.01■□□□□ 0.63
SAMD4B-204ENST00000596271 PLEKHH2Q8IVE3 1493 aa19.01■□□□□ 0.63
SAMD4B-204ENST00000596271 HSPA2P54652 639 aa19■□□□□ 0.63
SAMD4B-204ENST00000596271 ESF1Q9H501 851 aaKnown RBP19■□□□□ 0.63
SAMD4B-204ENST00000596271 CNTLNQ9NXG0 1405 aa19■□□□□ 0.63
SAMD4B-204ENST00000596271 DIP2CQ9Y2E4 1556 aa18.99■□□□□ 0.63
SAMD4B-204ENST00000596271 GPATCH8Q9UKJ3 1502 aaKnown RBP18.99■□□□□ 0.63
SAMD4B-204ENST00000596271 CFDP1Q9UEE9 299 aaPredicted RBP18.96■□□□□ 0.63
SAMD4B-204ENST00000596271 PPP6R1Q9UPN7 881 aa18.96■□□□□ 0.63
SAMD4B-204ENST00000596271 UHRF1BP1Q6BDS2 1440 aa18.95■□□□□ 0.62
SAMD4B-204ENST00000596271 SPAG9O60271 1321 aaKnown RBP18.95■□□□□ 0.62
SAMD4B-204ENST00000596271 PLPPR3Q6T4P5 718 aa18.94■□□□□ 0.62
SAMD4B-204ENST00000596271 CDC42BPAQ5VT25 1732 aa18.94■□□□□ 0.62
SAMD4B-204ENST00000596271 MTUS2Q5JR59 1369 aa18.93■□□□□ 0.62
SAMD4B-204ENST00000596271 CCNB3Q8WWL7 1395 aa18.93■□□□□ 0.62
SAMD4B-204ENST00000596271 PREX1Q8TCU6 1659 aa18.93■□□□□ 0.62
SAMD4B-204ENST00000596271 ITSN2Q9NZM3 1697 aa18.93■□□□□ 0.62
SAMD4B-204ENST00000596271 CEBPAP49715 358 aaPredicted RBP18.93■□□□□ 0.62
SAMD4B-204ENST00000596271 ABCA6Q8N139 1617 aa18.92■□□□□ 0.62
SAMD4B-204ENST00000596271 ZNF777Q9ULD5 760 aaPredicted RBP18.91■□□□□ 0.62
SAMD4B-204ENST00000596271 KIDINS220Q9ULH0 1771 aa18.91■□□□□ 0.62
SAMD4B-204ENST00000596271 SAMD9LQ8IVG5 1584 aa18.9■□□□□ 0.62
SAMD4B-204ENST00000596271 RSPH4AQ5TD94 716 aa18.9■□□□□ 0.62
SAMD4B-204ENST00000596271 CERKQ8TCT0 537 aa18.9■□□□□ 0.62
SAMD4B-204ENST00000596271 NPATQ14207 1427 aa18.9■□□□□ 0.62
SAMD4B-204ENST00000596271 HNRNPMP52272 730 aaKnown RBP eCLIP18.89■□□□□ 0.61
SAMD4B-204ENST00000596271 PTPRTO14522 1441 aa18.86■□□□□ 0.61
SAMD4B-204ENST00000596271 CEP162Q5TB80 1403 aa18.86■□□□□ 0.61
SAMD4B-204ENST00000596271 SYCP2Q9BX26 1530 aa18.85■□□□□ 0.61
SAMD4B-204ENST00000596271 RTEL1-TNFRSF6BF6WH68 1400 aa18.85■□□□□ 0.61
SAMD4B-204ENST00000596271 ZMYM3Q14202 1370 aa18.84■□□□□ 0.61
SAMD4B-204ENST00000596271 ATP7AQ04656 1500 aa18.83■□□□□ 0.6
SAMD4B-204ENST00000596271 EHBP1L1Q8N3D4 1523 aa18.83■□□□□ 0.6
SAMD4B-204ENST00000596271 A2MP01023 1474 aa18.83■□□□□ 0.6
SAMD4B-204ENST00000596271 MROH2AA6NES4 1674 aa18.81■□□□□ 0.6
SAMD4B-204ENST00000596271 C3P01024 1663 aa18.81■□□□□ 0.6
SAMD4B-204ENST00000596271 MBD5Q9P267 1494 aa18.8■□□□□ 0.6
SAMD4B-204ENST00000596271 PLXNC1O60486 1568 aa18.8■□□□□ 0.6
SAMD4B-204ENST00000596271 INO80Q9ULG1 1556 aaPredicted RBP18.79■□□□□ 0.6
SAMD4B-204ENST00000596271 STRCQ7RTU9 1775 aa18.77■□□□□ 0.6
SAMD4B-204ENST00000596271 DHX29Q7Z478 1369 aaKnown RBP18.77■□□□□ 0.6
SAMD4B-204ENST00000596271 NCOA1Q15788 1441 aa18.75■□□□□ 0.59
SAMD4B-204ENST00000596271 PKD2Q13563 968 aa18.75■□□□□ 0.59
SAMD4B-204ENST00000596271 TIAM1Q13009 1591 aa18.75■□□□□ 0.59
SAMD4B-204ENST00000596271 FAM135AQ9P2D6 1515 aa18.74■□□□□ 0.59
SAMD4B-204ENST00000596271 ZNF644Q9H582 1327 aaPredicted RBP18.74■□□□□ 0.59
SAMD4B-204ENST00000596271 ADGBQ8N7X0 1667 aa18.73■□□□□ 0.59
SAMD4B-204ENST00000596271 IQSEC2Q5JU85 1478 aa18.73■□□□□ 0.59
SAMD4B-204ENST00000596271 GGT6Q6P531 493 aa18.73■□□□□ 0.59
SAMD4B-204ENST00000596271 PTPRKQ15262 1439 aa18.72■□□□□ 0.59
SAMD4B-204ENST00000596271 PLA2R1Q13018 1463 aa18.71■□□□□ 0.59
SAMD4B-204ENST00000596271 NCOA2Q15596 1464 aa18.71■□□□□ 0.59
SAMD4B-204ENST00000596271 CCDC141Q6ZP82 1450 aa18.71■□□□□ 0.59
SAMD4B-204ENST00000596271 TSPY4P0CV99 314 aa18.7■□□□□ 0.58
SAMD4B-204ENST00000596271 TSPY10P0CW01 314 aa18.7■□□□□ 0.58
SAMD4B-204ENST00000596271 SUPT6HQ7KZ85 1726 aaKnown RBP18.69■□□□□ 0.58
SAMD4B-204ENST00000596271 MAP3K1Q13233 1512 aa18.68■□□□□ 0.58
SAMD4B-204ENST00000596271 VPS8Q8N3P4 1428 aa18.67■□□□□ 0.58
SAMD4B-204ENST00000596271 CAMSAP1Q5T5Y3 1602 aa18.65■□□□□ 0.58
SAMD4B-204ENST00000596271 KIF3BO15066 747 aa18.65■□□□□ 0.58
SAMD4B-204ENST00000596271 ARHGEF5Q12774 1597 aa18.64■□□□□ 0.58
SAMD4B-204ENST00000596271 CAMSAP2Q08AD1 1489 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms