RNA–Protein interactions for RNA: ENST00000595858.5

DDX49-204, Transcript of DEAD-box helicase 49, humanhuman

TSL 1 (best)

Gene DDX49, Length 1,882 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-204ENST00000595858 ARHGAP5Q13017 1502 aa23.19■■□□□ 1.3
DDX49-204ENST00000595858 NEO1Q92859 1461 aa23.19■■□□□ 1.3
DDX49-204ENST00000595858 PREX2Q70Z35 1606 aa23.18■■□□□ 1.3
DDX49-204ENST00000595858 CDC42BPBQ9Y5S2 1711 aa23.18■■□□□ 1.3
DDX49-204ENST00000595858 PHLDB1Q86UU1 1377 aa23.18■■□□□ 1.3
DDX49-204ENST00000595858 AKNAQ7Z591 1439 aa23.16■■□□□ 1.3
DDX49-204ENST00000595858 ZNF777Q9ULD5 760 aaPredicted RBP23.15■■□□□ 1.3
DDX49-204ENST00000595858 CFAP74Q9C0B2 1584 aa23.13■■□□□ 1.29
DDX49-204ENST00000595858 MYOM3Q5VTT5 1437 aa23.13■■□□□ 1.29
DDX49-204ENST00000595858 ITSN2Q9NZM3 1697 aa23.12■■□□□ 1.29
DDX49-204ENST00000595858 COL17A1Q9UMD9 1497 aaPredicted RBP23.12■■□□□ 1.29
DDX49-204ENST00000595858 ZNF644Q9H582 1327 aaPredicted RBP23.09■■□□□ 1.29
DDX49-204ENST00000595858 ADGRL1O94910 1474 aa23.09■■□□□ 1.29
DDX49-204ENST00000595858 SCAPERQ9BY12 1400 aa23.08■■□□□ 1.29
DDX49-204ENST00000595858 MIA2Q96PC5 1412 aa23.08■■□□□ 1.28
DDX49-204ENST00000595858 KDM6BO15054 1643 aa23.07■■□□□ 1.28
DDX49-204ENST00000595858 RAPGEF3O95398 923 aa23.06■■□□□ 1.28
DDX49-204ENST00000595858 SAMD9LQ8IVG5 1584 aa23.05■■□□□ 1.28
DDX49-204ENST00000595858 DENND4BO75064 1496 aaPredicted RBP23.04■■□□□ 1.28
DDX49-204ENST00000595858 FGD6Q6ZV73 1430 aa23.03■■□□□ 1.28
DDX49-204ENST00000595858 HNRNPMP52272 730 aaKnown RBP eCLIP23.03■■□□□ 1.28
DDX49-204ENST00000595858 KIAA1107Q9UPP5 1409 aa23.03■■□□□ 1.28
DDX49-204ENST00000595858 ABCC1P33527 1531 aa23.03■■□□□ 1.28
DDX49-204ENST00000595858 ARHGEF12Q9NZN5 1544 aa23.03■■□□□ 1.28
DDX49-204ENST00000595858 PLEKHH2Q8IVE3 1493 aa23.02■■□□□ 1.28
DDX49-204ENST00000595858 CAMSAP2Q08AD1 1489 aa23.01■■□□□ 1.27
DDX49-204ENST00000595858 AFAP1Q8N556 730 aa23■■□□□ 1.27
DDX49-204ENST00000595858 POGZQ7Z3K3 1410 aa22.99■■□□□ 1.27
DDX49-204ENST00000595858 SYCP2Q9BX26 1530 aa22.99■■□□□ 1.27
DDX49-204ENST00000595858 TRAPPC8Q9Y2L5 1435 aa22.98■■□□□ 1.27
DDX49-204ENST00000595858 MBD5Q9P267 1494 aa22.97■■□□□ 1.27
DDX49-204ENST00000595858 PTPN23Q9H3S7 1636 aa22.96■■□□□ 1.27
DDX49-204ENST00000595858 ZNF518AQ6AHZ1 1483 aa22.95■■□□□ 1.27
DDX49-204ENST00000595858 FRMPD1Q5SYB0 1578 aa22.95■■□□□ 1.26
DDX49-204ENST00000595858 RICTORQ6R327 1708 aa22.95■■□□□ 1.26
DDX49-204ENST00000595858 TCOF1Q13428 1488 aaKnown RBP22.95■■□□□ 1.26
DDX49-204ENST00000595858 RSPH4AQ5TD94 716 aa22.94■■□□□ 1.26
DDX49-204ENST00000595858 FAM50AQ14320 339 aaKnown RBP22.94■■□□□ 1.26
DDX49-204ENST00000595858 KDM5CP41229 1560 aa22.89■■□□□ 1.26
DDX49-204ENST00000595858 RRBP1Q9P2E9 1410 aaKnown RBP22.88■■□□□ 1.25
DDX49-204ENST00000595858 ARHGEF5Q12774 1597 aa22.88■■□□□ 1.25
DDX49-204ENST00000595858 ZMYM4Q5VZL5 1548 aa22.88■■□□□ 1.25
DDX49-204ENST00000595858 CCDC141Q6ZP82 1450 aa22.88■■□□□ 1.25
DDX49-204ENST00000595858 SPAG9O60271 1321 aaKnown RBP22.88■■□□□ 1.25
DDX49-204ENST00000595858 MYT1LQ9UL68 1186 aa22.87■■□□□ 1.25
DDX49-204ENST00000595858 TSPY4P0CV99 314 aa22.86■■□□□ 1.25
DDX49-204ENST00000595858 TSPY10P0CW01 314 aa22.86■■□□□ 1.25
DDX49-204ENST00000595858 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.86■■□□□ 1.25
DDX49-204ENST00000595858 MAGI2Q86UL8 1455 aa22.85■■□□□ 1.25
DDX49-204ENST00000595858 MLH3Q9UHC1 1453 aa22.85■■□□□ 1.25
DDX49-204ENST00000595858 ABCC5O15440 1437 aa22.84■■□□□ 1.25
DDX49-204ENST00000595858 DAPK1P53355 1430 aa22.82■■□□□ 1.24
DDX49-204ENST00000595858 YEATS2Q9ULM3 1422 aa22.82■■□□□ 1.24
DDX49-204ENST00000595858 HECW2Q9P2P5 1572 aa22.81■■□□□ 1.24
DDX49-204ENST00000595858 RTEL1-TNFRSF6BF6WH68 1400 aa22.8■■□□□ 1.24
DDX49-204ENST00000595858 DNMT1P26358 1616 aaKnown RBP22.8■■□□□ 1.24
DDX49-204ENST00000595858 ZFYVE16Q7Z3T8 1539 aa22.8■■□□□ 1.24
DDX49-204ENST00000595858 KIDINS220Q9ULH0 1771 aa22.78■■□□□ 1.24
DDX49-204ENST00000595858 ATP7AQ04656 1500 aa22.78■■□□□ 1.24
DDX49-204ENST00000595858 C9orf84Q5VXU9 1444 aa22.77■■□□□ 1.24
DDX49-204ENST00000595858 INO80Q9ULG1 1556 aaPredicted RBP22.77■■□□□ 1.24
DDX49-204ENST00000595858 ITGAEP38570 1179 aa22.76■■□□□ 1.23
DDX49-204ENST00000595858 ARHGEF40Q8TER5 1519 aa22.76■■□□□ 1.23
DDX49-204ENST00000595858 CHIC2Q9UKJ5 165 aa22.75■■□□□ 1.23
DDX49-204ENST00000595858 ATP10AO60312 1499 aa22.75■■□□□ 1.23
DDX49-204ENST00000595858 SHANK2Q9UPX8 1470 aa22.75■■□□□ 1.23
DDX49-204ENST00000595858 MAST1Q9Y2H9 1570 aa22.74■■□□□ 1.23
DDX49-204ENST00000595858 PTPRKQ15262 1439 aa22.74■■□□□ 1.23
DDX49-204ENST00000595858 CROCC2H7BZ55 1655 aa22.73■■□□□ 1.23
DDX49-204ENST00000595858 DIP2CQ9Y2E4 1556 aa22.72■■□□□ 1.23
DDX49-204ENST00000595858 ABCA6Q8N139 1617 aa22.72■■□□□ 1.23
DDX49-204ENST00000595858 ANKRD30AQ9BXX3 1397 aa22.68■■□□□ 1.22
DDX49-204ENST00000595858 RRP7BPQ9NSQ0 103 aa22.68■■□□□ 1.22
DDX49-204ENST00000595858 NCOA1Q15788 1441 aa22.68■■□□□ 1.22
DDX49-204ENST00000595858 ADGRL2O95490 1459 aa22.66■■□□□ 1.22
DDX49-204ENST00000595858 A2MP01023 1474 aa22.66■■□□□ 1.22
DDX49-204ENST00000595858 DHX29Q7Z478 1369 aaKnown RBP22.66■■□□□ 1.22
DDX49-204ENST00000595858 ARID4BQ4LE39 1312 aaPredicted RBP22.65■■□□□ 1.22
DDX49-204ENST00000595858 PLXNC1O60486 1568 aa22.65■■□□□ 1.22
DDX49-204ENST00000595858 KIF15Q9NS87 1388 aa22.64■■□□□ 1.22
DDX49-204ENST00000595858 REREQ9P2R6 1566 aa22.64■■□□□ 1.22
DDX49-204ENST00000595858 ROCK1Q13464 1354 aa22.64■■□□□ 1.21
DDX49-204ENST00000595858 ADGBQ8N7X0 1667 aa22.63■■□□□ 1.21
DDX49-204ENST00000595858 SIGLEC1Q9BZZ2 1709 aa22.61■■□□□ 1.21
DDX49-204ENST00000595858 AGLP35573 1532 aa22.59■■□□□ 1.21
DDX49-204ENST00000595858 DUOX2Q9NRD8 1548 aa22.59■■□□□ 1.21
DDX49-204ENST00000595858 KIF3BO15066 747 aa22.56■■□□□ 1.2
DDX49-204ENST00000595858 MLECQ14165 292 aa22.56■■□□□ 1.2
DDX49-204ENST00000595858 ERBINQ96RT1 1412 aa22.54■■□□□ 1.2
DDX49-204ENST00000595858 ANKRD50Q9ULJ7 1429 aa22.52■■□□□ 1.2
DDX49-204ENST00000595858 GGT6Q6P531 493 aa22.51■■□□□ 1.19
DDX49-204ENST00000595858 TRIM26Q12899 539 aaPredicted RBP22.51■■□□□ 1.19
DDX49-204ENST00000595858 NAIPQ13075 1403 aa22.5■■□□□ 1.19
DDX49-204ENST00000595858 HFM1A2PYH4 1435 aa22.49■■□□□ 1.19
DDX49-204ENST00000595858 BCORL1Q5H9F3 1711 aa22.49■■□□□ 1.19
DDX49-204ENST00000595858 EIF2AK4Q9P2K8 1649 aaKnown RBP22.48■■□□□ 1.19
DDX49-204ENST00000595858 KDM4FA0A1W2PPD8 638 aa22.47■■□□□ 1.19
DDX49-204ENST00000595858 PPP6R1Q9UPN7 881 aa22.45■■□□□ 1.18
DDX49-204ENST00000595858 ADAMTSL3P82987 1691 aa22.43■■□□□ 1.18
DDX49-204ENST00000595858 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.42■■□□□ 1.183e-6■■■■□ 20.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms