RNA–Protein interactions for RNA: ENST00000595689.2

SSX4-201, Transcript of SSX family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX4, Length 1,221 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4-201ENST00000595689 CCDC18Q5T9S5 1454 aa9.53□□□□□ -0.88
SSX4-201ENST00000595689 RAPGEF3O95398 923 aa9.53□□□□□ -0.88
SSX4-201ENST00000595689 ARHGEF40Q8TER5 1519 aa9.52□□□□□ -0.88
SSX4-201ENST00000595689 PLCH2O75038 1416 aa9.52□□□□□ -0.89
SSX4-201ENST00000595689 DENND4BO75064 1496 aaPredicted RBP9.52□□□□□ -0.89
SSX4-201ENST00000595689 ZMYM4Q5VZL5 1548 aa9.51□□□□□ -0.89
SSX4-201ENST00000595689 CDC42BPBQ9Y5S2 1711 aa9.51□□□□□ -0.89
SSX4-201ENST00000595689 CEP162Q5TB80 1403 aa9.51□□□□□ -0.89
SSX4-201ENST00000595689 PREX2Q70Z35 1606 aa9.51□□□□□ -0.89
SSX4-201ENST00000595689 CDK11AQ9UQ88 783 aaPredicted RBP9.5□□□□□ -0.89
SSX4-201ENST00000595689 CDC42BPAQ5VT25 1732 aa9.5□□□□□ -0.89
SSX4-201ENST00000595689 SIGLEC1Q9BZZ2 1709 aa9.5□□□□□ -0.89
SSX4-201ENST00000595689 ARHGAP5Q13017 1502 aa9.49□□□□□ -0.89
SSX4-201ENST00000595689 ADAMTSL3P82987 1691 aa9.48□□□□□ -0.89
SSX4-201ENST00000595689 POGZQ7Z3K3 1410 aa9.48□□□□□ -0.89
SSX4-201ENST00000595689 BCORL1Q5H9F3 1711 aa9.48□□□□□ -0.89
SSX4-201ENST00000595689 ZFYVE16Q7Z3T8 1539 aa9.48□□□□□ -0.89
SSX4-201ENST00000595689 SCAPERQ9BY12 1400 aa9.48□□□□□ -0.89
SSX4-201ENST00000595689 ITSN2Q9NZM3 1697 aa9.47□□□□□ -0.89
SSX4-201ENST00000595689 YEATS2Q9ULM3 1422 aa9.47□□□□□ -0.89
SSX4-201ENST00000595689 ABCC1P33527 1531 aa9.46□□□□□ -0.89
SSX4-201ENST00000595689 KDM5CP41229 1560 aa9.46□□□□□ -0.9
SSX4-201ENST00000595689 MADDQ8WXG6 1647 aa9.45□□□□□ -0.9
SSX4-201ENST00000595689 LOC105371045A0A1W2PR82 267 aa9.45□□□□□ -0.9
SSX4-201ENST00000595689 EFCAB2Q5VUJ9 269 aa9.44□□□□□ -0.9
SSX4-201ENST00000595689 MAGI2Q86UL8 1455 aa9.44□□□□□ -0.9
SSX4-201ENST00000595689 ARHGEF12Q9NZN5 1544 aa9.44□□□□□ -0.9
SSX4-201ENST00000595689 SAMD9LQ8IVG5 1584 aa9.44□□□□□ -0.9
SSX4-201ENST00000595689 HECW2Q9P2P5 1572 aa9.44□□□□□ -0.9
SSX4-201ENST00000595689 RIMS1Q86UR5 1692 aaKnown RBP9.43□□□□□ -0.9
SSX4-201ENST00000595689 EHBP1L1Q8N3D4 1523 aa9.43□□□□□ -0.9
SSX4-201ENST00000595689 ZNF518AQ6AHZ1 1483 aa9.43□□□□□ -0.9
SSX4-201ENST00000595689 MAPK8IP2Q13387 824 aaPredicted RBP9.43□□□□□ -0.9
SSX4-201ENST00000595689 PPP4R3CPQ6ZMV5 832 aa9.43□□□□□ -0.9
SSX4-201ENST00000595689 ABCA6Q8N139 1617 aa9.42□□□□□ -0.9
SSX4-201ENST00000595689 TIAM1Q13009 1591 aa9.42□□□□□ -0.9
SSX4-201ENST00000595689 GPATCH8Q9UKJ3 1502 aaKnown RBP9.42□□□□□ -0.9
SSX4-201ENST00000595689 DIP2CQ9Y2E4 1556 aa9.41□□□□□ -0.9
SSX4-201ENST00000595689 PTPRMP28827 1452 aa9.41□□□□□ -0.9
SSX4-201ENST00000595689 TRAPPC8Q9Y2L5 1435 aa9.41□□□□□ -0.9
SSX4-201ENST00000595689 SYCP2Q9BX26 1530 aa9.41□□□□□ -0.9
SSX4-201ENST00000595689 C9orf84Q5VXU9 1444 aa9.4□□□□□ -0.9
SSX4-201ENST00000595689 FER1L4A9Z1Z3 1794 aa9.4□□□□□ -0.9
SSX4-201ENST00000595689 MTUS2Q5JR59 1369 aa9.4□□□□□ -0.9
SSX4-201ENST00000595689 ARID4BQ4LE39 1312 aaPredicted RBP9.4□□□□□ -0.9
SSX4-201ENST00000595689 AFAP1Q8N556 730 aa9.4□□□□□ -0.9
SSX4-201ENST00000595689 ATP10AO60312 1499 aa9.4□□□□□ -0.91
SSX4-201ENST00000595689 KIDINS220Q9ULH0 1771 aa9.4□□□□□ -0.91
SSX4-201ENST00000595689 VPS8Q8N3P4 1428 aa9.39□□□□□ -0.91
SSX4-201ENST00000595689 SUPT6HQ7KZ85 1726 aaKnown RBP9.39□□□□□ -0.91
SSX4-201ENST00000595689 REREQ9P2R6 1566 aa9.38□□□□□ -0.91
SSX4-201ENST00000595689 MLH3Q9UHC1 1453 aa9.38□□□□□ -0.91
SSX4-201ENST00000595689 CCNB3Q8WWL7 1395 aa9.37□□□□□ -0.91
SSX4-201ENST00000595689 INO80Q9ULG1 1556 aaPredicted RBP9.37□□□□□ -0.91
SSX4-201ENST00000595689 NCOA2Q15596 1464 aa9.36□□□□□ -0.91
SSX4-201ENST00000595689 ZNF777Q9ULD5 760 aaPredicted RBP9.36□□□□□ -0.91
SSX4-201ENST00000595689 DMRT2Q9Y5R5 561 aa9.36□□□□□ -0.91
SSX4-201ENST00000595689 MLECQ14165 292 aa9.35□□□□□ -0.91
SSX4-201ENST00000595689 LRRC9Q6ZRR7 1453 aa9.34□□□□□ -0.91
SSX4-201ENST00000595689 PLEKHH2Q8IVE3 1493 aa9.34□□□□□ -0.91
SSX4-201ENST00000595689 KIAA1107Q9UPP5 1409 aa9.34□□□□□ -0.91
SSX4-201ENST00000595689 HNRNPMP52272 730 aaKnown RBP eCLIP9.34□□□□□ -0.91
SSX4-201ENST00000595689 CFDP1Q9UEE9 299 aaPredicted RBP9.34□□□□□ -0.91
SSX4-201ENST00000595689 MYT1LQ9UL68 1186 aa9.34□□□□□ -0.91
SSX4-201ENST00000595689 AGLP35573 1532 aa9.34□□□□□ -0.91
SSX4-201ENST00000595689 ATP7AQ04656 1500 aa9.34□□□□□ -0.91
SSX4-201ENST00000595689 ZNF644Q9H582 1327 aaPredicted RBP9.33□□□□□ -0.92
SSX4-201ENST00000595689 MAP3K1Q13233 1512 aa9.33□□□□□ -0.92
SSX4-201ENST00000595689 MBD5Q9P267 1494 aa9.33□□□□□ -0.92
SSX4-201ENST00000595689 PLXNC1O60486 1568 aa9.33□□□□□ -0.92
SSX4-201ENST00000595689 CAMSAP2Q08AD1 1489 aa9.32□□□□□ -0.92
SSX4-201ENST00000595689 LMTK3Q96Q04 1460 aa9.32□□□□□ -0.92
SSX4-201ENST00000595689 ADGBQ8N7X0 1667 aa9.32□□□□□ -0.92
SSX4-201ENST00000595689 C3P01024 1663 aa9.31□□□□□ -0.92
SSX4-201ENST00000595689 KANK4Q5T7N3 995 aaPredicted RBP9.3□□□□□ -0.92
SSX4-201ENST00000595689 SPAG9O60271 1321 aaKnown RBP9.3□□□□□ -0.92
SSX4-201ENST00000595689 PREX1Q8TCU6 1659 aa9.29□□□□□ -0.92
SSX4-201ENST00000595689 ARHGEF5Q12774 1597 aa9.29□□□□□ -0.92
SSX4-201ENST00000595689 A2MP01023 1474 aa9.28□□□□□ -0.92
SSX4-201ENST00000595689 CCDC141Q6ZP82 1450 aa9.28□□□□□ -0.92
SSX4-201ENST00000595689 MROH2AA6NES4 1674 aa9.27□□□□□ -0.93
SSX4-201ENST00000595689 CLTCQ00610 1675 aaKnown RBP9.27□□□□□ -0.93
SSX4-201ENST00000595689 RTEL1-TNFRSF6BF6WH68 1400 aa9.26□□□□□ -0.93
SSX4-201ENST00000595689 MYOM3Q5VTT5 1437 aa9.26□□□□□ -0.93
SSX4-201ENST00000595689 CEBPAP49715 358 aaPredicted RBP9.26□□□□□ -0.93
SSX4-201ENST00000595689 CROCC2H7BZ55 1655 aa9.25□□□□□ -0.93
SSX4-201ENST00000595689 MAST1Q9Y2H9 1570 aa9.24□□□□□ -0.93
SSX4-201ENST00000595689 PTPN23Q9H3S7 1636 aa9.23□□□□□ -0.93
SSX4-201ENST00000595689 MIA2Q96PC5 1412 aa9.23□□□□□ -0.93
SSX4-201ENST00000595689 CNTLNQ9NXG0 1405 aa9.23□□□□□ -0.93
SSX4-201ENST00000595689 HSPA2P54652 639 aa9.23□□□□□ -0.93
SSX4-201ENST00000595689 CNKSR2Q8WXI2 1034 aa9.22□□□□□ -0.93
SSX4-201ENST00000595689 DHX29Q7Z478 1369 aaKnown RBP9.22□□□□□ -0.93
SSX4-201ENST00000595689 STRCQ7RTU9 1775 aa9.21□□□□□ -0.94
SSX4-201ENST00000595689 UHRF1BP1Q6BDS2 1440 aa9.21□□□□□ -0.94
SSX4-201ENST00000595689 DNMT1P26358 1616 aaKnown RBP9.2□□□□□ -0.94
SSX4-201ENST00000595689 MYO3AQ8NEV4 1616 aa9.2□□□□□ -0.94
SSX4-201ENST00000595689 APLP2Q06481 763 aa9.2□□□□□ -0.94
SSX4-201ENST00000595689 RSPH4AQ5TD94 716 aa9.2□□□□□ -0.94
SSX4-201ENST00000595689 GGT6Q6P531 493 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms