RNA–Protein interactions for RNA: ENST00000595034.5

IRF3-209, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-209ENST00000595034 HECW2Q9P2P5 1572 aa29.88■■■□□ 2.37
IRF3-209ENST00000595034 PCF11O94913 1555 aaKnown RBP29.87■■■□□ 2.37
IRF3-209ENST00000595034 FYCO1Q9BQS8 1478 aa29.86■■■□□ 2.37
IRF3-209ENST00000595034 ARHGAP5Q13017 1502 aa29.86■■■□□ 2.37
IRF3-209ENST00000595034 ADAMTSL3P82987 1691 aa29.85■■■□□ 2.37
IRF3-209ENST00000595034 PTPRMP28827 1452 aa29.84■■■□□ 2.37
IRF3-209ENST00000595034 BCORL1Q5H9F3 1711 aa29.84■■■□□ 2.37
IRF3-209ENST00000595034 ZNF518AQ6AHZ1 1483 aa29.79■■■□□ 2.36
IRF3-209ENST00000595034 LRRIQ1Q96JM4 1722 aa29.79■■■□□ 2.36
IRF3-209ENST00000595034 YEATS2Q9ULM3 1422 aa29.78■■■□□ 2.36
IRF3-209ENST00000595034 MYT1LQ9UL68 1186 aa29.77■■■□□ 2.36
IRF3-209ENST00000595034 MADDQ8WXG6 1647 aa29.74■■■□□ 2.35
IRF3-209ENST00000595034 ATP10AO60312 1499 aa29.73■■■□□ 2.35
IRF3-209ENST00000595034 C9orf84Q5VXU9 1444 aa29.71■■■□□ 2.35
IRF3-209ENST00000595034 PREX2Q70Z35 1606 aa29.68■■■□□ 2.34
IRF3-209ENST00000595034 MLECQ14165 292 aa29.67■■■□□ 2.34
IRF3-209ENST00000595034 AFAP1Q8N556 730 aa29.67■■■□□ 2.34
IRF3-209ENST00000595034 RIMS1Q86UR5 1692 aaKnown RBP29.66■■■□□ 2.34
IRF3-209ENST00000595034 CDC42BPBQ9Y5S2 1711 aa29.64■■■□□ 2.34
IRF3-209ENST00000595034 KDM5CP41229 1560 aa29.64■■■□□ 2.33
IRF3-209ENST00000595034 MTUS2Q5JR59 1369 aa29.61■■■□□ 2.33
IRF3-209ENST00000595034 ABCC1P33527 1531 aa29.6■■■□□ 2.33
IRF3-209ENST00000595034 PLPPR3Q6T4P5 718 aa29.59■■■□□ 2.33
IRF3-209ENST00000595034 MLH3Q9UHC1 1453 aa29.58■■■□□ 2.33
IRF3-209ENST00000595034 ZNF777Q9ULD5 760 aaPredicted RBP29.58■■■□□ 2.33
IRF3-209ENST00000595034 CEP162Q5TB80 1403 aa29.57■■■□□ 2.32
IRF3-209ENST00000595034 CCNB3Q8WWL7 1395 aa29.55■■■□□ 2.32
IRF3-209ENST00000595034 CDC42BPAQ5VT25 1732 aa29.54■■■□□ 2.32
IRF3-209ENST00000595034 FER1L4A9Z1Z3 1794 aa29.54■■■□□ 2.32
IRF3-209ENST00000595034 SIGLEC1Q9BZZ2 1709 aa29.54■■■□□ 2.32
IRF3-209ENST00000595034 TRAPPC8Q9Y2L5 1435 aa29.54■■■□□ 2.32
IRF3-209ENST00000595034 CFDP1Q9UEE9 299 aaPredicted RBP29.53■■■□□ 2.32
IRF3-209ENST00000595034 ITSN2Q9NZM3 1697 aa29.53■■■□□ 2.32
IRF3-209ENST00000595034 ARHGEF12Q9NZN5 1544 aa29.51■■■□□ 2.32
IRF3-209ENST00000595034 GPATCH8Q9UKJ3 1502 aaKnown RBP29.51■■■□□ 2.32
IRF3-209ENST00000595034 DIP2CQ9Y2E4 1556 aa29.51■■■□□ 2.31
IRF3-209ENST00000595034 PLEKHH2Q8IVE3 1493 aa29.5■■■□□ 2.31
IRF3-209ENST00000595034 ESF1Q9H501 851 aaKnown RBP29.5■■■□□ 2.31
IRF3-209ENST00000595034 REREQ9P2R6 1566 aa29.5■■■□□ 2.31
IRF3-209ENST00000595034 LMTK3Q96Q04 1460 aa29.48■■■□□ 2.31
IRF3-209ENST00000595034 EHBP1L1Q8N3D4 1523 aa29.45■■■□□ 2.31
IRF3-209ENST00000595034 ABCA6Q8N139 1617 aa29.45■■■□□ 2.3
IRF3-209ENST00000595034 SPAG9O60271 1321 aaKnown RBP29.45■■■□□ 2.3
IRF3-209ENST00000595034 SAMD9LQ8IVG5 1584 aa29.44■■■□□ 2.3
IRF3-209ENST00000595034 SYCP2Q9BX26 1530 aa29.44■■■□□ 2.3
IRF3-209ENST00000595034 KIAA1107Q9UPP5 1409 aa29.44■■■□□ 2.3
IRF3-209ENST00000595034 ILDR1Q86SU0 546 aaPredicted RBP29.43■■■□□ 2.3
IRF3-209ENST00000595034 AGLP35573 1532 aa29.42■■■□□ 2.3
IRF3-209ENST00000595034 HNRNPMP52272 730 aaKnown RBP eCLIP29.42■■■□□ 2.3
IRF3-209ENST00000595034 KIDINS220Q9ULH0 1771 aa29.36■■■□□ 2.29
IRF3-209ENST00000595034 HSPA2P54652 639 aa29.35■■■□□ 2.29
IRF3-209ENST00000595034 CEBPAP49715 358 aaPredicted RBP29.34■■■□□ 2.29
IRF3-209ENST00000595034 CNTLNQ9NXG0 1405 aa29.32■■■□□ 2.28
IRF3-209ENST00000595034 TIAM1Q13009 1591 aa29.31■■■□□ 2.28
IRF3-209ENST00000595034 ATP7AQ04656 1500 aa29.31■■■□□ 2.28
IRF3-209ENST00000595034 PREX1Q8TCU6 1659 aa29.29■■■□□ 2.28
IRF3-209ENST00000595034 LOC105371045A0A1W2PR82 267 aa29.29■■■□□ 2.28
IRF3-209ENST00000595034 UHRF1BP1Q6BDS2 1440 aa29.28■■■□□ 2.28
IRF3-209ENST00000595034 VPS8Q8N3P4 1428 aa29.28■■■□□ 2.28
IRF3-209ENST00000595034 SUPT6HQ7KZ85 1726 aaKnown RBP29.26■■■□□ 2.27
IRF3-209ENST00000595034 INO80Q9ULG1 1556 aaPredicted RBP29.25■■■□□ 2.27
IRF3-209ENST00000595034 A2MP01023 1474 aa29.24■■■□□ 2.27
IRF3-209ENST00000595034 NCOA2Q15596 1464 aa29.23■■■□□ 2.27
IRF3-209ENST00000595034 ZNF644Q9H582 1327 aaPredicted RBP29.22■■■□□ 2.27
IRF3-209ENST00000595034 RSPH4AQ5TD94 716 aa29.22■■■□□ 2.27
IRF3-209ENST00000595034 FBXO41Q8TF61 875 aa29.2■■■□□ 2.26
IRF3-209ENST00000595034 RTEL1-TNFRSF6BF6WH68 1400 aa29.2■■■□□ 2.26
IRF3-209ENST00000595034 DMRT2Q9Y5R5 561 aa29.19■■■□□ 2.26
IRF3-209ENST00000595034 MBD5Q9P267 1494 aa29.18■■■□□ 2.26
IRF3-209ENST00000595034 C3P01024 1663 aa29.18■■■□□ 2.26
IRF3-209ENST00000595034 PPP6R1Q9UPN7 881 aa29.16■■■□□ 2.26
IRF3-209ENST00000595034 PLXNC1O60486 1568 aa29.16■■■□□ 2.26
IRF3-209ENST00000595034 ADGBQ8N7X0 1667 aa29.15■■■□□ 2.26
IRF3-209ENST00000595034 CCDC141Q6ZP82 1450 aa29.15■■■□□ 2.26
IRF3-209ENST00000595034 SETD1BQ9UPS6 1966 aaKnown RBP29.15■■■□□ 2.26
IRF3-209ENST00000595034 GGT6Q6P531 493 aa29.14■■■□□ 2.26
IRF3-209ENST00000595034 CAMSAP2Q08AD1 1489 aa29.14■■■□□ 2.26
IRF3-209ENST00000595034 LRRC9Q6ZRR7 1453 aa29.14■■■□□ 2.26
IRF3-209ENST00000595034 MROH2AA6NES4 1674 aa29.12■■■□□ 2.25
IRF3-209ENST00000595034 APLP2Q06481 763 aa29.12■■■□□ 2.25
IRF3-209ENST00000595034 ZMYM3Q14202 1370 aa29.12■■■□□ 2.25
IRF3-209ENST00000595034 NPATQ14207 1427 aa29.11■■■□□ 2.25
IRF3-209ENST00000595034 MAP3K1Q13233 1512 aa29.11■■■□□ 2.25
IRF3-209ENST00000595034 TSPY4P0CV99 314 aa29.11■■■□□ 2.25
IRF3-209ENST00000595034 TSPY10P0CW01 314 aa29.11■■■□□ 2.25
IRF3-209ENST00000595034 DHX29Q7Z478 1369 aaKnown RBP29.08■■■□□ 2.25
IRF3-209ENST00000595034 CLTCQ00610 1675 aaKnown RBP29.02■■■□□ 2.24
IRF3-209ENST00000595034 ARHGEF5Q12774 1597 aa29.02■■■□□ 2.24
IRF3-209ENST00000595034 KIF3BO15066 747 aa29■■■□□ 2.23
IRF3-209ENST00000595034 CERKQ8TCT0 537 aa28.99■■■□□ 2.23
IRF3-209ENST00000595034 MIA2Q96PC5 1412 aa28.98■■■□□ 2.23
IRF3-209ENST00000595034 KANK4Q5T7N3 995 aaPredicted RBP28.98■■■□□ 2.23
IRF3-209ENST00000595034 MYOM3Q5VTT5 1437 aa28.97■■■□□ 2.23
IRF3-209ENST00000595034 PTPRTO14522 1441 aa28.95■■■□□ 2.23
IRF3-209ENST00000595034 FAM135AQ9P2D6 1515 aa28.94■■■□□ 2.22
IRF3-209ENST00000595034 PTPRKQ15262 1439 aa28.94■■■□□ 2.22
IRF3-209ENST00000595034 STRCQ7RTU9 1775 aa28.93■■■□□ 2.22
IRF3-209ENST00000595034 NCOA1Q15788 1441 aa28.92■■■□□ 2.22
IRF3-209ENST00000595034 WASHC2CQ9Y4E1 1318 aa28.92■■■□□ 2.22
IRF3-209ENST00000595034 KDM5DQ9BY66 1539 aa28.89■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms