RNA–Protein interactions for RNA: ENST00000594190.5

USHBP1-204, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 4

Gene USHBP1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-204ENST00000594190 CDC42BPBQ9Y5S2 1711 aa25.48■■□□□ 1.67
USHBP1-204ENST00000594190 MAGI2Q86UL8 1455 aa25.47■■□□□ 1.67
USHBP1-204ENST00000594190 POGZQ7Z3K3 1410 aa25.46■■□□□ 1.67
USHBP1-204ENST00000594190 MADDQ8WXG6 1647 aa25.46■■□□□ 1.67
USHBP1-204ENST00000594190 PTPRMP28827 1452 aa25.46■■□□□ 1.67
USHBP1-204ENST00000594190 YEATS2Q9ULM3 1422 aa25.45■■□□□ 1.66
USHBP1-204ENST00000594190 ZFYVE16Q7Z3T8 1539 aa25.44■■□□□ 1.66
USHBP1-204ENST00000594190 CCDC18Q5T9S5 1454 aa25.44■■□□□ 1.66
USHBP1-204ENST00000594190 CDK11AQ9UQ88 783 aaPredicted RBP25.43■■□□□ 1.66
USHBP1-204ENST00000594190 SCAPERQ9BY12 1400 aa25.43■■□□□ 1.66
USHBP1-204ENST00000594190 FBXO41Q8TF61 875 aa25.42■■□□□ 1.66
USHBP1-204ENST00000594190 ATP1B4Q9UN42 357 aaPredicted RBP25.42■■□□□ 1.66
USHBP1-204ENST00000594190 FYCO1Q9BQS8 1478 aa25.41■■□□□ 1.66
USHBP1-204ENST00000594190 PREX2Q70Z35 1606 aa25.4■■□□□ 1.66
USHBP1-204ENST00000594190 KDM5CP41229 1560 aa25.39■■□□□ 1.66
USHBP1-204ENST00000594190 CDC42BPAQ5VT25 1732 aa25.37■■□□□ 1.65
USHBP1-204ENST00000594190 RIMS1Q86UR5 1692 aaKnown RBP25.36■■□□□ 1.65
USHBP1-204ENST00000594190 EFCAB2Q5VUJ9 269 aa25.36■■□□□ 1.65
USHBP1-204ENST00000594190 ARHGAP5Q13017 1502 aa25.35■■□□□ 1.65
USHBP1-204ENST00000594190 ARID4BQ4LE39 1312 aaPredicted RBP25.35■■□□□ 1.65
USHBP1-204ENST00000594190 ZNF518AQ6AHZ1 1483 aa25.32■■□□□ 1.64
USHBP1-204ENST00000594190 ABCC1P33527 1531 aa25.31■■□□□ 1.64
USHBP1-204ENST00000594190 ITSN2Q9NZM3 1697 aa25.3■■□□□ 1.64
USHBP1-204ENST00000594190 ARHGEF12Q9NZN5 1544 aa25.3■■□□□ 1.64
USHBP1-204ENST00000594190 ATP10AO60312 1499 aa25.29■■□□□ 1.64
USHBP1-204ENST00000594190 FER1L4A9Z1Z3 1794 aa25.28■■□□□ 1.64
USHBP1-204ENST00000594190 C9orf84Q5VXU9 1444 aa25.26■■□□□ 1.63
USHBP1-204ENST00000594190 VPS8Q8N3P4 1428 aa25.26■■□□□ 1.63
USHBP1-204ENST00000594190 REREQ9P2R6 1566 aa25.26■■□□□ 1.63
USHBP1-204ENST00000594190 DIP2CQ9Y2E4 1556 aa25.26■■□□□ 1.63
USHBP1-204ENST00000594190 ABCA6Q8N139 1617 aa25.24■■□□□ 1.63
USHBP1-204ENST00000594190 LMTK3Q96Q04 1460 aa25.24■■□□□ 1.63
USHBP1-204ENST00000594190 MLH3Q9UHC1 1453 aa25.24■■□□□ 1.63
USHBP1-204ENST00000594190 AFAP1Q8N556 730 aa25.23■■□□□ 1.63
USHBP1-204ENST00000594190 TRAPPC8Q9Y2L5 1435 aa25.22■■□□□ 1.63
USHBP1-204ENST00000594190 KIDINS220Q9ULH0 1771 aa25.21■■□□□ 1.63
USHBP1-204ENST00000594190 SAMD9LQ8IVG5 1584 aa25.21■■□□□ 1.63
USHBP1-204ENST00000594190 GPATCH8Q9UKJ3 1502 aaKnown RBP25.2■■□□□ 1.62
USHBP1-204ENST00000594190 AGLP35573 1532 aa25.14■■□□□ 1.62
USHBP1-204ENST00000594190 PLPPR3Q6T4P5 718 aa25.11■■□□□ 1.61
USHBP1-204ENST00000594190 SYCP2Q9BX26 1530 aa25.11■■□□□ 1.61
USHBP1-204ENST00000594190 TIAM1Q13009 1591 aa25.09■■□□□ 1.61
USHBP1-204ENST00000594190 HSPA2P54652 639 aa25.08■■□□□ 1.61
USHBP1-204ENST00000594190 EHBP1L1Q8N3D4 1523 aa25.07■■□□□ 1.6
USHBP1-204ENST00000594190 KIAA1107Q9UPP5 1409 aa25.07■■□□□ 1.6
USHBP1-204ENST00000594190 MLECQ14165 292 aa25.07■■□□□ 1.6
USHBP1-204ENST00000594190 INO80Q9ULG1 1556 aaPredicted RBP25.05■■□□□ 1.6
USHBP1-204ENST00000594190 PREX1Q8TCU6 1659 aa25.05■■□□□ 1.6
USHBP1-204ENST00000594190 APLP2Q06481 763 aa25.03■■□□□ 1.6
USHBP1-204ENST00000594190 C3P01024 1663 aa25.03■■□□□ 1.6
USHBP1-204ENST00000594190 MTUS2Q5JR59 1369 aa25.03■■□□□ 1.6
USHBP1-204ENST00000594190 SETD1BQ9UPS6 1966 aaKnown RBP25.02■■□□□ 1.6
USHBP1-204ENST00000594190 PLEKHH2Q8IVE3 1493 aa25.01■■□□□ 1.59
USHBP1-204ENST00000594190 PLXNC1O60486 1568 aa25.01■■□□□ 1.59
USHBP1-204ENST00000594190 CCNB3Q8WWL7 1395 aa25■■□□□ 1.59
USHBP1-204ENST00000594190 ATP7AQ04656 1500 aa24.99■■□□□ 1.59
USHBP1-204ENST00000594190 MAP3K1Q13233 1512 aa24.97■■□□□ 1.59
USHBP1-204ENST00000594190 MBD5Q9P267 1494 aa24.97■■□□□ 1.59
USHBP1-204ENST00000594190 HNRNPMP52272 730 aaKnown RBP eCLIP24.97■■□□□ 1.59
USHBP1-204ENST00000594190 CERKQ8TCT0 537 aa24.96■■□□□ 1.59
USHBP1-204ENST00000594190 CFDP1Q9UEE9 299 aaPredicted RBP24.96■■□□□ 1.59
USHBP1-204ENST00000594190 ZNF777Q9ULD5 760 aaPredicted RBP24.96■■□□□ 1.59
USHBP1-204ENST00000594190 CEBPAP49715 358 aaPredicted RBP24.95■■□□□ 1.58
USHBP1-204ENST00000594190 SUPT6HQ7KZ85 1726 aaKnown RBP24.95■■□□□ 1.58
USHBP1-204ENST00000594190 MROH2AA6NES4 1674 aa24.94■■□□□ 1.58
USHBP1-204ENST00000594190 STRCQ7RTU9 1775 aa24.93■■□□□ 1.58
USHBP1-204ENST00000594190 MYT1LQ9UL68 1186 aa24.92■■□□□ 1.58
USHBP1-204ENST00000594190 ADGBQ8N7X0 1667 aa24.91■■□□□ 1.58
USHBP1-204ENST00000594190 SPAG9O60271 1321 aaKnown RBP24.91■■□□□ 1.58
USHBP1-204ENST00000594190 ZNF644Q9H582 1327 aaPredicted RBP24.91■■□□□ 1.58
USHBP1-204ENST00000594190 NCOA2Q15596 1464 aa24.9■■□□□ 1.58
USHBP1-204ENST00000594190 A2MP01023 1474 aa24.88■■□□□ 1.57
USHBP1-204ENST00000594190 CNTLNQ9NXG0 1405 aa24.86■■□□□ 1.57
USHBP1-204ENST00000594190 RTEL1-TNFRSF6BF6WH68 1400 aa24.85■■□□□ 1.57
USHBP1-204ENST00000594190 LRRC9Q6ZRR7 1453 aa24.83■■□□□ 1.57
USHBP1-204ENST00000594190 CLTCQ00610 1675 aaKnown RBP24.83■■□□□ 1.57
USHBP1-204ENST00000594190 CAMSAP2Q08AD1 1489 aa24.83■■□□□ 1.56
USHBP1-204ENST00000594190 UHRF1BP1Q6BDS2 1440 aa24.82■■□□□ 1.56
USHBP1-204ENST00000594190 DMRT2Q9Y5R5 561 aa24.81■■□□□ 1.56
USHBP1-204ENST00000594190 ARHGEF5Q12774 1597 aa24.8■■□□□ 1.56
USHBP1-204ENST00000594190 TRIM26Q12899 539 aaPredicted RBP24.79■■□□□ 1.56
USHBP1-204ENST00000594190 NPATQ14207 1427 aa24.78■■□□□ 1.56
USHBP1-204ENST00000594190 CCDC141Q6ZP82 1450 aa24.78■■□□□ 1.56
USHBP1-204ENST00000594190 ZMYM3Q14202 1370 aa24.76■■□□□ 1.55
USHBP1-204ENST00000594190 ZNF142P52746 1687 aaPredicted RBP24.74■■□□□ 1.55
USHBP1-204ENST00000594190 DHX29Q7Z478 1369 aaKnown RBP24.72■■□□□ 1.55
USHBP1-204ENST00000594190 KANK4Q5T7N3 995 aaPredicted RBP24.71■■□□□ 1.55
USHBP1-204ENST00000594190 PTPRKQ15262 1439 aa24.7■■□□□ 1.55
USHBP1-204ENST00000594190 ESF1Q9H501 851 aaKnown RBP24.7■■□□□ 1.54
USHBP1-204ENST00000594190 MYO3AQ8NEV4 1616 aa24.7■■□□□ 1.54
USHBP1-204ENST00000594190 MAST1Q9Y2H9 1570 aa24.7■■□□□ 1.54
USHBP1-204ENST00000594190 RSPH4AQ5TD94 716 aa24.69■■□□□ 1.54
USHBP1-204ENST00000594190 PPP6R1Q9UPN7 881 aa24.69■■□□□ 1.54
USHBP1-204ENST00000594190 NCOA1Q15788 1441 aa24.67■■□□□ 1.54
USHBP1-204ENST00000594190 DISP3Q9P2K9 1392 aa24.67■■□□□ 1.54
USHBP1-204ENST00000594190 PPARGC1BQ86YN6 1023 aaKnown RBP24.66■■□□□ 1.54
USHBP1-204ENST00000594190 PTPRTO14522 1441 aa24.66■■□□□ 1.54
USHBP1-204ENST00000594190 FAM135AQ9P2D6 1515 aa24.66■■□□□ 1.54
USHBP1-204ENST00000594190 MIA2Q96PC5 1412 aa24.64■■□□□ 1.54
USHBP1-204ENST00000594190 GGT6Q6P531 493 aa24.64■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms