RNA–Protein interactions for RNA: ENST00000594116.1

LTBP4-209, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-209ENST00000594116 POGZQ7Z3K3 1410 aa27.35■■□□□ 1.97
LTBP4-209ENST00000594116 MADDQ8WXG6 1647 aa27.34■■□□□ 1.97
LTBP4-209ENST00000594116 CLIP1P30622 1438 aa27.34■■□□□ 1.97
LTBP4-209ENST00000594116 CASKIN1Q8WXD9 1431 aa27.33■■□□□ 1.97
LTBP4-209ENST00000594116 SCAPERQ9BY12 1400 aa27.33■■□□□ 1.97
LTBP4-209ENST00000594116 ARID4BQ4LE39 1312 aaPredicted RBP27.33■■□□□ 1.97
LTBP4-209ENST00000594116 CCDC18Q5T9S5 1454 aa27.32■■□□□ 1.96
LTBP4-209ENST00000594116 EFCAB2Q5VUJ9 269 aa27.3■■□□□ 1.96
LTBP4-209ENST00000594116 YEATS2Q9ULM3 1422 aa27.3■■□□□ 1.96
LTBP4-209ENST00000594116 SIGLEC1Q9BZZ2 1709 aa27.28■■□□□ 1.96
LTBP4-209ENST00000594116 ARHGAP5Q13017 1502 aa27.26■■□□□ 1.95
LTBP4-209ENST00000594116 FYCO1Q9BQS8 1478 aa27.25■■□□□ 1.95
LTBP4-209ENST00000594116 CEP162Q5TB80 1403 aa27.25■■□□□ 1.95
LTBP4-209ENST00000594116 RIMS1Q86UR5 1692 aaKnown RBP27.25■■□□□ 1.95
LTBP4-209ENST00000594116 CDC42BPBQ9Y5S2 1711 aa27.23■■□□□ 1.95
LTBP4-209ENST00000594116 ZNF518AQ6AHZ1 1483 aa27.22■■□□□ 1.95
LTBP4-209ENST00000594116 PREX2Q70Z35 1606 aa27.22■■□□□ 1.95
LTBP4-209ENST00000594116 KDM5CP41229 1560 aa27.21■■□□□ 1.95
LTBP4-209ENST00000594116 ATP10AO60312 1499 aa27.18■■□□□ 1.94
LTBP4-209ENST00000594116 C9orf84Q5VXU9 1444 aa27.16■■□□□ 1.94
LTBP4-209ENST00000594116 FER1L4A9Z1Z3 1794 aa27.14■■□□□ 1.94
LTBP4-209ENST00000594116 CDC42BPAQ5VT25 1732 aa27.13■■□□□ 1.93
LTBP4-209ENST00000594116 ABCC1P33527 1531 aa27.13■■□□□ 1.93
LTBP4-209ENST00000594116 LMTK3Q96Q04 1460 aa27.12■■□□□ 1.93
LTBP4-209ENST00000594116 ITSN2Q9NZM3 1697 aa27.1■■□□□ 1.93
LTBP4-209ENST00000594116 ARHGEF12Q9NZN5 1544 aa27.1■■□□□ 1.93
LTBP4-209ENST00000594116 AFAP1Q8N556 730 aa27.09■■□□□ 1.93
LTBP4-209ENST00000594116 DIP2CQ9Y2E4 1556 aa27.08■■□□□ 1.93
LTBP4-209ENST00000594116 MLH3Q9UHC1 1453 aa27.07■■□□□ 1.92
LTBP4-209ENST00000594116 REREQ9P2R6 1566 aa27.07■■□□□ 1.92
LTBP4-209ENST00000594116 MLECQ14165 292 aa27.05■■□□□ 1.92
LTBP4-209ENST00000594116 ILDR1Q86SU0 546 aaPredicted RBP27.05■■□□□ 1.92
LTBP4-209ENST00000594116 ABCA6Q8N139 1617 aa27.05■■□□□ 1.92
LTBP4-209ENST00000594116 TRAPPC8Q9Y2L5 1435 aa27.03■■□□□ 1.92
LTBP4-209ENST00000594116 SAMD9LQ8IVG5 1584 aa26.99■■□□□ 1.91
LTBP4-209ENST00000594116 GPATCH8Q9UKJ3 1502 aaKnown RBP26.99■■□□□ 1.91
LTBP4-209ENST00000594116 KIDINS220Q9ULH0 1771 aa26.98■■□□□ 1.91
LTBP4-209ENST00000594116 MYT1LQ9UL68 1186 aa26.97■■□□□ 1.91
LTBP4-209ENST00000594116 AGLP35573 1532 aa26.96■■□□□ 1.91
LTBP4-209ENST00000594116 SYCP2Q9BX26 1530 aa26.94■■□□□ 1.9
LTBP4-209ENST00000594116 PLPPR3Q6T4P5 718 aa26.93■■□□□ 1.9
LTBP4-209ENST00000594116 MTUS2Q5JR59 1369 aa26.92■■□□□ 1.9
LTBP4-209ENST00000594116 PREX1Q8TCU6 1659 aa26.92■■□□□ 1.9
LTBP4-209ENST00000594116 VPS8Q8N3P4 1428 aa26.9■■□□□ 1.9
LTBP4-209ENST00000594116 PLEKHH2Q8IVE3 1493 aa26.9■■□□□ 1.9
LTBP4-209ENST00000594116 EHBP1L1Q8N3D4 1523 aa26.9■■□□□ 1.9
LTBP4-209ENST00000594116 CCNB3Q8WWL7 1395 aa26.89■■□□□ 1.9
LTBP4-209ENST00000594116 ZNF777Q9ULD5 760 aaPredicted RBP26.89■■□□□ 1.9
LTBP4-209ENST00000594116 KIAA1107Q9UPP5 1409 aa26.89■■□□□ 1.89
LTBP4-209ENST00000594116 HSPA2P54652 639 aa26.86■■□□□ 1.89
LTBP4-209ENST00000594116 CFDP1Q9UEE9 299 aaPredicted RBP26.86■■□□□ 1.89
LTBP4-209ENST00000594116 TIAM1Q13009 1591 aa26.85■■□□□ 1.89
LTBP4-209ENST00000594116 INO80Q9ULG1 1556 aaPredicted RBP26.84■■□□□ 1.89
LTBP4-209ENST00000594116 C3P01024 1663 aa26.83■■□□□ 1.89
LTBP4-209ENST00000594116 ATP7AQ04656 1500 aa26.83■■□□□ 1.89
LTBP4-209ENST00000594116 SETD1BQ9UPS6 1966 aaKnown RBP26.82■■□□□ 1.88
LTBP4-209ENST00000594116 CEBPAP49715 358 aaPredicted RBP26.82■■□□□ 1.88
LTBP4-209ENST00000594116 HNRNPMP52272 730 aaKnown RBP eCLIP26.82■■□□□ 1.88
LTBP4-209ENST00000594116 SPAG9O60271 1321 aaKnown RBP26.82■■□□□ 1.88
LTBP4-209ENST00000594116 PLXNC1O60486 1568 aa26.77■■□□□ 1.88
LTBP4-209ENST00000594116 CNTLNQ9NXG0 1405 aa26.77■■□□□ 1.88
LTBP4-209ENST00000594116 UHRF1BP1Q6BDS2 1440 aa26.76■■□□□ 1.87
LTBP4-209ENST00000594116 SUPT6HQ7KZ85 1726 aaKnown RBP26.76■■□□□ 1.87
LTBP4-209ENST00000594116 FBXO41Q8TF61 875 aa26.75■■□□□ 1.87
LTBP4-209ENST00000594116 ESF1Q9H501 851 aaKnown RBP26.75■■□□□ 1.87
LTBP4-209ENST00000594116 MROH2AA6NES4 1674 aa26.75■■□□□ 1.87
LTBP4-209ENST00000594116 A2MP01023 1474 aa26.72■■□□□ 1.87
LTBP4-209ENST00000594116 MBD5Q9P267 1494 aa26.72■■□□□ 1.87
LTBP4-209ENST00000594116 ADGBQ8N7X0 1667 aa26.72■■□□□ 1.87
LTBP4-209ENST00000594116 ZNF644Q9H582 1327 aaPredicted RBP26.69■■□□□ 1.86
LTBP4-209ENST00000594116 NCOA2Q15596 1464 aa26.69■■□□□ 1.86
LTBP4-209ENST00000594116 STRCQ7RTU9 1775 aa26.69■■□□□ 1.86
LTBP4-209ENST00000594116 RTEL1-TNFRSF6BF6WH68 1400 aa26.65■■□□□ 1.86
LTBP4-209ENST00000594116 MAP3K1Q13233 1512 aa26.65■■□□□ 1.86
LTBP4-209ENST00000594116 NPATQ14207 1427 aa26.64■■□□□ 1.85
LTBP4-209ENST00000594116 CLTCQ00610 1675 aaKnown RBP26.63■■□□□ 1.85
LTBP4-209ENST00000594116 CAMSAP2Q08AD1 1489 aa26.62■■□□□ 1.85
LTBP4-209ENST00000594116 CCDC141Q6ZP82 1450 aa26.61■■□□□ 1.85
LTBP4-209ENST00000594116 ZMYM3Q14202 1370 aa26.6■■□□□ 1.85
LTBP4-209ENST00000594116 DMRT2Q9Y5R5 561 aa26.59■■□□□ 1.85
LTBP4-209ENST00000594116 LRRC9Q6ZRR7 1453 aa26.59■■□□□ 1.85
LTBP4-209ENST00000594116 ARHGEF5Q12774 1597 aa26.56■■□□□ 1.84
LTBP4-209ENST00000594116 RSPH4AQ5TD94 716 aa26.55■■□□□ 1.84
LTBP4-209ENST00000594116 PPP6R1Q9UPN7 881 aa26.55■■□□□ 1.84
LTBP4-209ENST00000594116 DHX29Q7Z478 1369 aaKnown RBP26.54■■□□□ 1.84
LTBP4-209ENST00000594116 GGT6Q6P531 493 aa26.53■■□□□ 1.84
LTBP4-209ENST00000594116 CERKQ8TCT0 537 aa26.53■■□□□ 1.84
LTBP4-209ENST00000594116 PTPRTO14522 1441 aa26.53■■□□□ 1.84
LTBP4-209ENST00000594116 ZNF142P52746 1687 aaPredicted RBP26.53■■□□□ 1.84
LTBP4-209ENST00000594116 MYO3AQ8NEV4 1616 aa26.51■■□□□ 1.83
LTBP4-209ENST00000594116 NCOA1Q15788 1441 aa26.51■■□□□ 1.83
LTBP4-209ENST00000594116 PTPRKQ15262 1439 aa26.5■■□□□ 1.83
LTBP4-209ENST00000594116 FAM135AQ9P2D6 1515 aa26.49■■□□□ 1.83
LTBP4-209ENST00000594116 CAMSAP1Q5T5Y3 1602 aa26.47■■□□□ 1.83
LTBP4-209ENST00000594116 APLP2Q06481 763 aa26.46■■□□□ 1.83
LTBP4-209ENST00000594116 CEP170BQ9Y4F5 1589 aaPredicted RBP26.45■■□□□ 1.82
LTBP4-209ENST00000594116 MAST1Q9Y2H9 1570 aa26.44■■□□□ 1.82
LTBP4-209ENST00000594116 KANK4Q5T7N3 995 aaPredicted RBP26.43■■□□□ 1.82
LTBP4-209ENST00000594116 KDM5DQ9BY66 1539 aa26.43■■□□□ 1.82
LTBP4-209ENST00000594116 MIA2Q96PC5 1412 aa26.42■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms