RNA–Protein interactions for RNA: ENST00000593827.1

COPE-204, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 3

Gene COPE, Length 601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-204ENST00000593827 MAGI2Q86UL8 1455 aa31.86■■■□□ 2.69
COPE-204ENST00000593827 POGZQ7Z3K3 1410 aa31.86■■■□□ 2.69
COPE-204ENST00000593827 ZMYM4Q5VZL5 1548 aa31.83■■■□□ 2.69
COPE-204ENST00000593827 RICTORQ6R327 1708 aa31.83■■■□□ 2.69
COPE-204ENST00000593827 VPS8Q8N3P4 1428 aa31.82■■■□□ 2.68
COPE-204ENST00000593827 ARID4BQ4LE39 1312 aaPredicted RBP31.79■■■□□ 2.68
COPE-204ENST00000593827 ZNF518AQ6AHZ1 1483 aa31.79■■■□□ 2.68
COPE-204ENST00000593827 ARHGEF40Q8TER5 1519 aa31.78■■■□□ 2.68
COPE-204ENST00000593827 CCNB3Q8WWL7 1395 aa31.78■■■□□ 2.68
COPE-204ENST00000593827 PREX2Q70Z35 1606 aa31.78■■■□□ 2.68
COPE-204ENST00000593827 EHBP1L1Q8N3D4 1523 aa31.76■■■□□ 2.68
COPE-204ENST00000593827 ZFYVE16Q7Z3T8 1539 aa31.75■■■□□ 2.67
COPE-204ENST00000593827 GPATCH8Q9UKJ3 1502 aaKnown RBP31.72■■■□□ 2.67
COPE-204ENST00000593827 CFDP1Q9UEE9 299 aaPredicted RBP31.72■■■□□ 2.67
COPE-204ENST00000593827 CDC42BPBQ9Y5S2 1711 aa31.71■■■□□ 2.67
COPE-204ENST00000593827 MYT1LQ9UL68 1186 aa31.7■■■□□ 2.67
COPE-204ENST00000593827 ZNF777Q9ULD5 760 aaPredicted RBP31.7■■■□□ 2.67
COPE-204ENST00000593827 AFAP1Q8N556 730 aa31.69■■■□□ 2.66
COPE-204ENST00000593827 YEATS2Q9ULM3 1422 aa31.67■■■□□ 2.66
COPE-204ENST00000593827 PLEKHH2Q8IVE3 1493 aa31.66■■■□□ 2.66
COPE-204ENST00000593827 ABCC1P33527 1531 aa31.66■■■□□ 2.66
COPE-204ENST00000593827 CDC42BPAQ5VT25 1732 aa31.66■■■□□ 2.66
COPE-204ENST00000593827 ATP10AO60312 1499 aa31.64■■■□□ 2.66
COPE-204ENST00000593827 KDM5CP41229 1560 aa31.64■■■□□ 2.65
COPE-204ENST00000593827 APLP2Q06481 763 aa31.62■■■□□ 2.65
COPE-204ENST00000593827 TIAM1Q13009 1591 aa31.62■■■□□ 2.65
COPE-204ENST00000593827 KIAA1107Q9UPP5 1409 aa31.61■■■□□ 2.65
COPE-204ENST00000593827 C9orf84Q5VXU9 1444 aa31.6■■■□□ 2.65
COPE-204ENST00000593827 ILDR1Q86SU0 546 aaPredicted RBP31.6■■■□□ 2.65
COPE-204ENST00000593827 MAP3K1Q13233 1512 aa31.59■■■□□ 2.65
COPE-204ENST00000593827 MLH3Q9UHC1 1453 aa31.59■■■□□ 2.65
COPE-204ENST00000593827 TRAPPC8Q9Y2L5 1435 aa31.58■■■□□ 2.65
COPE-204ENST00000593827 ARHGEF12Q9NZN5 1544 aa31.57■■■□□ 2.64
COPE-204ENST00000593827 HECW2Q9P2P5 1572 aa31.56■■■□□ 2.64
COPE-204ENST00000593827 BCORL1Q5H9F3 1711 aa31.55■■■□□ 2.64
COPE-204ENST00000593827 SUPT6HQ7KZ85 1726 aaKnown RBP31.55■■■□□ 2.64
COPE-204ENST00000593827 ITSN2Q9NZM3 1697 aa31.54■■■□□ 2.64
COPE-204ENST00000593827 NCOA2Q15596 1464 aa31.54■■■□□ 2.64
COPE-204ENST00000593827 LRRC9Q6ZRR7 1453 aa31.54■■■□□ 2.64
COPE-204ENST00000593827 SAMD9LQ8IVG5 1584 aa31.54■■■□□ 2.64
COPE-204ENST00000593827 ADAMTSL3P82987 1691 aa31.54■■■□□ 2.64
COPE-204ENST00000593827 HNRNPMP52272 730 aaKnown RBP eCLIP31.53■■■□□ 2.64
COPE-204ENST00000593827 SYCP2Q9BX26 1530 aa31.52■■■□□ 2.64
COPE-204ENST00000593827 SPAG9O60271 1321 aaKnown RBP31.51■■■□□ 2.64
COPE-204ENST00000593827 PTPRMP28827 1452 aa31.47■■■□□ 2.63
COPE-204ENST00000593827 MLECQ14165 292 aa31.45■■■□□ 2.63
COPE-204ENST00000593827 RSPH4AQ5TD94 716 aa31.45■■■□□ 2.63
COPE-204ENST00000593827 REREQ9P2R6 1566 aa31.44■■■□□ 2.62
COPE-204ENST00000593827 DIP2CQ9Y2E4 1556 aa31.44■■■□□ 2.62
COPE-204ENST00000593827 MADDQ8WXG6 1647 aa31.42■■■□□ 2.62
COPE-204ENST00000593827 KANK4Q5T7N3 995 aaPredicted RBP31.41■■■□□ 2.62
COPE-204ENST00000593827 ZNF644Q9H582 1327 aaPredicted RBP31.41■■■□□ 2.62
COPE-204ENST00000593827 ABCA6Q8N139 1617 aa31.38■■■□□ 2.61
COPE-204ENST00000593827 AGLP35573 1532 aa31.36■■■□□ 2.61
COPE-204ENST00000593827 MBD5Q9P267 1494 aa31.35■■■□□ 2.61
COPE-204ENST00000593827 ESF1Q9H501 851 aaKnown RBP31.35■■■□□ 2.61
COPE-204ENST00000593827 KIDINS220Q9ULH0 1771 aa31.35■■■□□ 2.61
COPE-204ENST00000593827 ATP7AQ04656 1500 aa31.34■■■□□ 2.61
COPE-204ENST00000593827 CAMSAP2Q08AD1 1489 aa31.33■■■□□ 2.61
COPE-204ENST00000593827 RTEL1-TNFRSF6BF6WH68 1400 aa31.32■■■□□ 2.61
COPE-204ENST00000593827 SIGLEC1Q9BZZ2 1709 aa31.32■■■□□ 2.61
COPE-204ENST00000593827 MIA2Q96PC5 1412 aa31.32■■■□□ 2.6
COPE-204ENST00000593827 CCDC141Q6ZP82 1450 aa31.31■■■□□ 2.6
COPE-204ENST00000593827 RIMS1Q86UR5 1692 aaKnown RBP31.3■■■□□ 2.6
COPE-204ENST00000593827 MYOM3Q5VTT5 1437 aa31.3■■■□□ 2.6
COPE-204ENST00000593827 TSPY4P0CV99 314 aa31.29■■■□□ 2.6
COPE-204ENST00000593827 TSPY10P0CW01 314 aa31.29■■■□□ 2.6
COPE-204ENST00000593827 INO80Q9ULG1 1556 aaPredicted RBP31.28■■■□□ 2.6
COPE-204ENST00000593827 A2MP01023 1474 aa31.26■■■□□ 2.59
COPE-204ENST00000593827 FER1L4A9Z1Z3 1794 aa31.25■■■□□ 2.59
COPE-204ENST00000593827 PLPPR3Q6T4P5 718 aa31.22■■■□□ 2.59
COPE-204ENST00000593827 CNTLNQ9NXG0 1405 aa31.21■■■□□ 2.59
COPE-204ENST00000593827 ARHGEF5Q12774 1597 aa31.21■■■□□ 2.59
COPE-204ENST00000593827 PPP6R1Q9UPN7 881 aa31.17■■■□□ 2.58
COPE-204ENST00000593827 DHX29Q7Z478 1369 aaKnown RBP31.16■■■□□ 2.58
COPE-204ENST00000593827 PLXNC1O60486 1568 aa31.15■■■□□ 2.58
COPE-204ENST00000593827 ADGBQ8N7X0 1667 aa31.15■■■□□ 2.58
COPE-204ENST00000593827 GGT6Q6P531 493 aa31.1■■■□□ 2.57
COPE-204ENST00000593827 CEBPAP49715 358 aaPredicted RBP31.09■■■□□ 2.57
COPE-204ENST00000593827 FGD6Q6ZV73 1430 aa31.07■■■□□ 2.57
COPE-204ENST00000593827 LMTK3Q96Q04 1460 aa31.06■■■□□ 2.56
COPE-204ENST00000593827 MAST1Q9Y2H9 1570 aa31.04■■■□□ 2.56
COPE-204ENST00000593827 KIF3BO15066 747 aa31.03■■■□□ 2.56
COPE-204ENST00000593827 PTPN23Q9H3S7 1636 aa31.02■■■□□ 2.56
COPE-204ENST00000593827 ZMYM3Q14202 1370 aa31■■■□□ 2.55
COPE-204ENST00000593827 TCOF1Q13428 1488 aaKnown RBP31■■■□□ 2.55
COPE-204ENST00000593827 UHRF1BP1Q6BDS2 1440 aa30.98■■■□□ 2.55
COPE-204ENST00000593827 SHANK2Q9UPX8 1470 aa30.98■■■□□ 2.55
COPE-204ENST00000593827 NPATQ14207 1427 aa30.96■■■□□ 2.55
COPE-204ENST00000593827 MROH2AA6NES4 1674 aa30.96■■■□□ 2.55
COPE-204ENST00000593827 FAM135AQ9P2D6 1515 aa30.95■■■□□ 2.55
COPE-204ENST00000593827 ABCC5O15440 1437 aa30.94■■■□□ 2.54
COPE-204ENST00000593827 C3P01024 1663 aa30.93■■■□□ 2.54
COPE-204ENST00000593827 DAPK1P53355 1430 aa30.92■■■□□ 2.54
COPE-204ENST00000593827 HSPA2P54652 639 aa30.92■■■□□ 2.54
COPE-204ENST00000593827 PREX1Q8TCU6 1659 aa30.92■■■□□ 2.54
COPE-204ENST00000593827 SETD1BQ9UPS6 1966 aaKnown RBP30.92■■■□□ 2.54
COPE-204ENST00000593827 WASHC2CQ9Y4E1 1318 aa30.91■■■□□ 2.54
COPE-204ENST00000593827 FAM50AQ14320 339 aaKnown RBP30.9■■■□□ 2.54
COPE-204ENST00000593827 DUOX2Q9NRD8 1548 aa30.88■■■□□ 2.53
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms