RNA–Protein interactions for RNA: ENST00000593738.1

LTBP4-208, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 302 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-208ENST00000593738 ZMYM4Q5VZL5 1548 aa30.52■■■□□ 2.48
LTBP4-208ENST00000593738 CDC42BPBQ9Y5S2 1711 aa30.5■■■□□ 2.47
LTBP4-208ENST00000593738 PREX2Q70Z35 1606 aa30.49■■■□□ 2.47
LTBP4-208ENST00000593738 MAGI2Q86UL8 1455 aa30.49■■■□□ 2.47
LTBP4-208ENST00000593738 POGZQ7Z3K3 1410 aa30.48■■■□□ 2.47
LTBP4-208ENST00000593738 ARHGEF40Q8TER5 1519 aa30.46■■■□□ 2.47
LTBP4-208ENST00000593738 CDC42BPAQ5VT25 1732 aa30.44■■■□□ 2.46
LTBP4-208ENST00000593738 MTUS2Q5JR59 1369 aa30.43■■■□□ 2.46
LTBP4-208ENST00000593738 ZFYVE16Q7Z3T8 1539 aa30.42■■■□□ 2.46
LTBP4-208ENST00000593738 ZNF518AQ6AHZ1 1483 aa30.4■■■□□ 2.46
LTBP4-208ENST00000593738 ARID4BQ4LE39 1312 aaPredicted RBP30.36■■■□□ 2.45
LTBP4-208ENST00000593738 VPS8Q8N3P4 1428 aa30.36■■■□□ 2.45
LTBP4-208ENST00000593738 YEATS2Q9ULM3 1422 aa30.36■■■□□ 2.45
LTBP4-208ENST00000593738 EHBP1L1Q8N3D4 1523 aa30.36■■■□□ 2.45
LTBP4-208ENST00000593738 GPATCH8Q9UKJ3 1502 aaKnown RBP30.36■■■□□ 2.45
LTBP4-208ENST00000593738 ADAMTSL3P82987 1691 aa30.33■■■□□ 2.45
LTBP4-208ENST00000593738 KDM5CP41229 1560 aa30.33■■■□□ 2.45
LTBP4-208ENST00000593738 ABCC1P33527 1531 aa30.33■■■□□ 2.45
LTBP4-208ENST00000593738 BCORL1Q5H9F3 1711 aa30.33■■■□□ 2.45
LTBP4-208ENST00000593738 CCNB3Q8WWL7 1395 aa30.32■■■□□ 2.44
LTBP4-208ENST00000593738 AFAP1Q8N556 730 aa30.32■■■□□ 2.44
LTBP4-208ENST00000593738 ITSN2Q9NZM3 1697 aa30.3■■■□□ 2.44
LTBP4-208ENST00000593738 ATP10AO60312 1499 aa30.29■■■□□ 2.44
LTBP4-208ENST00000593738 ARHGEF12Q9NZN5 1544 aa30.27■■■□□ 2.44
LTBP4-208ENST00000593738 CFDP1Q9UEE9 299 aaPredicted RBP30.27■■■□□ 2.44
LTBP4-208ENST00000593738 TIAM1Q13009 1591 aa30.27■■■□□ 2.44
LTBP4-208ENST00000593738 HECW2Q9P2P5 1572 aa30.26■■■□□ 2.43
LTBP4-208ENST00000593738 ZNF777Q9ULD5 760 aaPredicted RBP30.26■■■□□ 2.43
LTBP4-208ENST00000593738 MLH3Q9UHC1 1453 aa30.25■■■□□ 2.43
LTBP4-208ENST00000593738 SAMD9LQ8IVG5 1584 aa30.25■■■□□ 2.43
LTBP4-208ENST00000593738 TRAPPC8Q9Y2L5 1435 aa30.24■■■□□ 2.43
LTBP4-208ENST00000593738 PLEKHH2Q8IVE3 1493 aa30.24■■■□□ 2.43
LTBP4-208ENST00000593738 C9orf84Q5VXU9 1444 aa30.23■■■□□ 2.43
LTBP4-208ENST00000593738 MYT1LQ9UL68 1186 aa30.23■■■□□ 2.43
LTBP4-208ENST00000593738 KIAA1107Q9UPP5 1409 aa30.22■■■□□ 2.43
LTBP4-208ENST00000593738 SUPT6HQ7KZ85 1726 aaKnown RBP30.21■■■□□ 2.43
LTBP4-208ENST00000593738 SIGLEC1Q9BZZ2 1709 aa30.2■■■□□ 2.43
LTBP4-208ENST00000593738 MAP3K1Q13233 1512 aa30.2■■■□□ 2.42
LTBP4-208ENST00000593738 PTPRMP28827 1452 aa30.19■■■□□ 2.42
LTBP4-208ENST00000593738 MADDQ8WXG6 1647 aa30.18■■■□□ 2.42
LTBP4-208ENST00000593738 SYCP2Q9BX26 1530 aa30.17■■■□□ 2.42
LTBP4-208ENST00000593738 REREQ9P2R6 1566 aa30.15■■■□□ 2.42
LTBP4-208ENST00000593738 DIP2CQ9Y2E4 1556 aa30.15■■■□□ 2.42
LTBP4-208ENST00000593738 NCOA2Q15596 1464 aa30.15■■■□□ 2.42
LTBP4-208ENST00000593738 HNRNPMP52272 730 aaKnown RBP eCLIP30.15■■■□□ 2.42
LTBP4-208ENST00000593738 LRRC9Q6ZRR7 1453 aa30.14■■■□□ 2.42
LTBP4-208ENST00000593738 KIDINS220Q9ULH0 1771 aa30.13■■■□□ 2.41
LTBP4-208ENST00000593738 ABCA6Q8N139 1617 aa30.12■■■□□ 2.41
LTBP4-208ENST00000593738 RIMS1Q86UR5 1692 aaKnown RBP30.1■■■□□ 2.41
LTBP4-208ENST00000593738 SPAG9O60271 1321 aaKnown RBP30.09■■■□□ 2.41
LTBP4-208ENST00000593738 MLECQ14165 292 aa30.09■■■□□ 2.41
LTBP4-208ENST00000593738 FER1L4A9Z1Z3 1794 aa30.05■■■□□ 2.4
LTBP4-208ENST00000593738 ZNF644Q9H582 1327 aaPredicted RBP30.05■■■□□ 2.4
LTBP4-208ENST00000593738 APLP2Q06481 763 aa30.05■■■□□ 2.4
LTBP4-208ENST00000593738 AGLP35573 1532 aa30.05■■■□□ 2.4
LTBP4-208ENST00000593738 KANK4Q5T7N3 995 aaPredicted RBP30.03■■■□□ 2.4
LTBP4-208ENST00000593738 MBD5Q9P267 1494 aa30.02■■■□□ 2.4
LTBP4-208ENST00000593738 ATP7AQ04656 1500 aa30.01■■■□□ 2.4
LTBP4-208ENST00000593738 INO80Q9ULG1 1556 aaPredicted RBP30.01■■■□□ 2.39
LTBP4-208ENST00000593738 RSPH4AQ5TD94 716 aa30■■■□□ 2.39
LTBP4-208ENST00000593738 CAMSAP2Q08AD1 1489 aa29.97■■■□□ 2.39
LTBP4-208ENST00000593738 RTEL1-TNFRSF6BF6WH68 1400 aa29.95■■■□□ 2.38
LTBP4-208ENST00000593738 CCDC141Q6ZP82 1450 aa29.92■■■□□ 2.38
LTBP4-208ENST00000593738 MIA2Q96PC5 1412 aa29.9■■■□□ 2.38
LTBP4-208ENST00000593738 A2MP01023 1474 aa29.9■■■□□ 2.38
LTBP4-208ENST00000593738 ADGBQ8N7X0 1667 aa29.9■■■□□ 2.38
LTBP4-208ENST00000593738 ARHGEF5Q12774 1597 aa29.9■■■□□ 2.38
LTBP4-208ENST00000593738 MYOM3Q5VTT5 1437 aa29.89■■■□□ 2.38
LTBP4-208ENST00000593738 ESF1Q9H501 851 aaKnown RBP29.88■■■□□ 2.37
LTBP4-208ENST00000593738 PLXNC1O60486 1568 aa29.87■■■□□ 2.37
LTBP4-208ENST00000593738 PLPPR3Q6T4P5 718 aa29.86■■■□□ 2.37
LTBP4-208ENST00000593738 CNTLNQ9NXG0 1405 aa29.83■■■□□ 2.37
LTBP4-208ENST00000593738 TSPY4P0CV99 314 aa29.83■■■□□ 2.37
LTBP4-208ENST00000593738 TSPY10P0CW01 314 aa29.83■■■□□ 2.37
LTBP4-208ENST00000593738 LMTK3Q96Q04 1460 aa29.81■■■□□ 2.36
LTBP4-208ENST00000593738 DHX29Q7Z478 1369 aaKnown RBP29.79■■■□□ 2.36
LTBP4-208ENST00000593738 CEBPAP49715 358 aaPredicted RBP29.78■■■□□ 2.36
LTBP4-208ENST00000593738 SETD1BQ9UPS6 1966 aaKnown RBP29.77■■■□□ 2.36
LTBP4-208ENST00000593738 C3P01024 1663 aa29.76■■■□□ 2.36
LTBP4-208ENST00000593738 PPP6R1Q9UPN7 881 aa29.76■■■□□ 2.35
LTBP4-208ENST00000593738 MAST1Q9Y2H9 1570 aa29.74■■■□□ 2.35
LTBP4-208ENST00000593738 MROH2AA6NES4 1674 aa29.74■■■□□ 2.35
LTBP4-208ENST00000593738 PREX1Q8TCU6 1659 aa29.73■■■□□ 2.35
LTBP4-208ENST00000593738 GGT6Q6P531 493 aa29.71■■■□□ 2.35
LTBP4-208ENST00000593738 PTPN23Q9H3S7 1636 aa29.71■■■□□ 2.35
LTBP4-208ENST00000593738 FGD6Q6ZV73 1430 aa29.68■■■□□ 2.34
LTBP4-208ENST00000593738 ZMYM3Q14202 1370 aa29.66■■■□□ 2.34
LTBP4-208ENST00000593738 CLTCQ00610 1675 aaKnown RBP29.66■■■□□ 2.34
LTBP4-208ENST00000593738 KIF3BO15066 747 aa29.65■■■□□ 2.34
LTBP4-208ENST00000593738 TCOF1Q13428 1488 aaKnown RBP29.65■■■□□ 2.34
LTBP4-208ENST00000593738 UHRF1BP1Q6BDS2 1440 aa29.64■■■□□ 2.34
LTBP4-208ENST00000593738 HSPA2P54652 639 aa29.63■■■□□ 2.33
LTBP4-208ENST00000593738 NPATQ14207 1427 aa29.62■■■□□ 2.33
LTBP4-208ENST00000593738 FAM135AQ9P2D6 1515 aa29.61■■■□□ 2.33
LTBP4-208ENST00000593738 SHANK2Q9UPX8 1470 aa29.6■■■□□ 2.33
LTBP4-208ENST00000593738 CROCC2H7BZ55 1655 aa29.6■■■□□ 2.33
LTBP4-208ENST00000593738 ABCC5O15440 1437 aa29.59■■■□□ 2.33
LTBP4-208ENST00000593738 DNMT1P26358 1616 aaKnown RBP29.58■■■□□ 2.33
LTBP4-208ENST00000593738 DAPK1P53355 1430 aa29.55■■■□□ 2.32
LTBP4-208ENST00000593738 EIF2AK4Q9P2K8 1649 aaKnown RBP29.55■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms