RNA–Protein interactions for RNA: ENST00000593251.5

RETREG3-212, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 565 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-212ENST00000593251 SCAPERQ9BY12 1400 aa28.94■■■□□ 2.22
RETREG3-212ENST00000593251 KIF14Q15058 1648 aa28.94■■■□□ 2.22
RETREG3-212ENST00000593251 LRRIQ1Q96JM4 1722 aa28.94■■■□□ 2.22
RETREG3-212ENST00000593251 LMTK3Q96Q04 1460 aa28.93■■■□□ 2.22
RETREG3-212ENST00000593251 PLPPR3Q6T4P5 718 aa28.93■■■□□ 2.22
RETREG3-212ENST00000593251 POGZQ7Z3K3 1410 aa28.92■■■□□ 2.22
RETREG3-212ENST00000593251 MAGI2Q86UL8 1455 aa28.91■■■□□ 2.22
RETREG3-212ENST00000593251 FER1L4A9Z1Z3 1794 aa28.9■■■□□ 2.22
RETREG3-212ENST00000593251 MLECQ14165 292 aa28.88■■■□□ 2.21
RETREG3-212ENST00000593251 CDK11AQ9UQ88 783 aaPredicted RBP28.85■■■□□ 2.21
RETREG3-212ENST00000593251 EFCAB2Q5VUJ9 269 aa28.84■■■□□ 2.21
RETREG3-212ENST00000593251 TROQ12816 1431 aaPredicted RBP28.82■■■□□ 2.2
RETREG3-212ENST00000593251 ARHGAP5Q13017 1502 aa28.81■■■□□ 2.2
RETREG3-212ENST00000593251 HSPA2P54652 639 aa28.8■■■□□ 2.2
RETREG3-212ENST00000593251 ATP10AO60312 1499 aa28.79■■■□□ 2.2
RETREG3-212ENST00000593251 FBXO41Q8TF61 875 aa28.79■■■□□ 2.2
RETREG3-212ENST00000593251 CDC42BPBQ9Y5S2 1711 aa28.78■■■□□ 2.2
RETREG3-212ENST00000593251 CLIP1P30622 1438 aa28.77■■■□□ 2.2
RETREG3-212ENST00000593251 C9orf84Q5VXU9 1444 aa28.77■■■□□ 2.2
RETREG3-212ENST00000593251 ARHGEF12Q9NZN5 1544 aa28.74■■■□□ 2.19
RETREG3-212ENST00000593251 ZNF518AQ6AHZ1 1483 aa28.74■■■□□ 2.19
RETREG3-212ENST00000593251 KDM5CP41229 1560 aa28.72■■■□□ 2.19
RETREG3-212ENST00000593251 AFAP1Q8N556 730 aa28.72■■■□□ 2.19
RETREG3-212ENST00000593251 PREX2Q70Z35 1606 aa28.69■■■□□ 2.18
RETREG3-212ENST00000593251 MYT1LQ9UL68 1186 aa28.68■■■□□ 2.18
RETREG3-212ENST00000593251 DIP2CQ9Y2E4 1556 aa28.67■■■□□ 2.18
RETREG3-212ENST00000593251 CASKIN1Q8WXD9 1431 aa28.66■■■□□ 2.18
RETREG3-212ENST00000593251 ABCA6Q8N139 1617 aa28.65■■■□□ 2.18
RETREG3-212ENST00000593251 PREX1Q8TCU6 1659 aa28.65■■■□□ 2.18
RETREG3-212ENST00000593251 CCDC18Q5T9S5 1454 aa28.65■■■□□ 2.18
RETREG3-212ENST00000593251 CEBPAP49715 358 aaPredicted RBP28.64■■■□□ 2.18
RETREG3-212ENST00000593251 ITSN2Q9NZM3 1697 aa28.64■■■□□ 2.17
RETREG3-212ENST00000593251 CDC42BPAQ5VT25 1732 aa28.63■■■□□ 2.17
RETREG3-212ENST00000593251 ABCC1P33527 1531 aa28.62■■■□□ 2.17
RETREG3-212ENST00000593251 TRAPPC8Q9Y2L5 1435 aa28.6■■■□□ 2.17
RETREG3-212ENST00000593251 REREQ9P2R6 1566 aa28.58■■■□□ 2.17
RETREG3-212ENST00000593251 MLH3Q9UHC1 1453 aa28.57■■■□□ 2.16
RETREG3-212ENST00000593251 FYCO1Q9BQS8 1478 aa28.55■■■□□ 2.16
RETREG3-212ENST00000593251 KIDINS220Q9ULH0 1771 aa28.55■■■□□ 2.16
RETREG3-212ENST00000593251 C3P01024 1663 aa28.53■■■□□ 2.16
RETREG3-212ENST00000593251 SETD1BQ9UPS6 1966 aaKnown RBP28.51■■■□□ 2.15
RETREG3-212ENST00000593251 STRCQ7RTU9 1775 aa28.5■■■□□ 2.15
RETREG3-212ENST00000593251 SAMD9LQ8IVG5 1584 aa28.48■■■□□ 2.15
RETREG3-212ENST00000593251 AGLP35573 1532 aa28.48■■■□□ 2.15
RETREG3-212ENST00000593251 ZNF777Q9ULD5 760 aaPredicted RBP28.47■■■□□ 2.15
RETREG3-212ENST00000593251 UHRF1BP1Q6BDS2 1440 aa28.46■■■□□ 2.15
RETREG3-212ENST00000593251 CERKQ8TCT0 537 aa28.46■■■□□ 2.15
RETREG3-212ENST00000593251 SYCP2Q9BX26 1530 aa28.44■■■□□ 2.14
RETREG3-212ENST00000593251 GPATCH8Q9UKJ3 1502 aaKnown RBP28.42■■■□□ 2.14
RETREG3-212ENST00000593251 ESF1Q9H501 851 aaKnown RBP28.41■■■□□ 2.14
RETREG3-212ENST00000593251 SUPT6HQ7KZ85 1726 aaKnown RBP28.4■■■□□ 2.14
RETREG3-212ENST00000593251 HNRNPMP52272 730 aaKnown RBP eCLIP28.37■■■□□ 2.13
RETREG3-212ENST00000593251 SPAG9O60271 1321 aaKnown RBP28.33■■■□□ 2.13
RETREG3-212ENST00000593251 ATP7AQ04656 1500 aa28.32■■■□□ 2.12
RETREG3-212ENST00000593251 DMRT2Q9Y5R5 561 aa28.31■■■□□ 2.12
RETREG3-212ENST00000593251 CCNB3Q8WWL7 1395 aa28.31■■■□□ 2.12
RETREG3-212ENST00000593251 CNTLNQ9NXG0 1405 aa28.31■■■□□ 2.12
RETREG3-212ENST00000593251 INO80Q9ULG1 1556 aaPredicted RBP28.31■■■□□ 2.12
RETREG3-212ENST00000593251 MROH2AA6NES4 1674 aa28.31■■■□□ 2.12
RETREG3-212ENST00000593251 CFDP1Q9UEE9 299 aaPredicted RBP28.3■■■□□ 2.12
RETREG3-212ENST00000593251 MTUS2Q5JR59 1369 aa28.28■■■□□ 2.12
RETREG3-212ENST00000593251 CLTCQ00610 1675 aaKnown RBP28.28■■■□□ 2.12
RETREG3-212ENST00000593251 PLEKHH2Q8IVE3 1493 aa28.27■■■□□ 2.12
RETREG3-212ENST00000593251 KIAA1107Q9UPP5 1409 aa28.26■■■□□ 2.12
RETREG3-212ENST00000593251 PLXNC1O60486 1568 aa28.25■■■□□ 2.11
RETREG3-212ENST00000593251 TIAM1Q13009 1591 aa28.24■■■□□ 2.11
RETREG3-212ENST00000593251 PTPRTO14522 1441 aa28.23■■■□□ 2.11
RETREG3-212ENST00000593251 A2MP01023 1474 aa28.22■■■□□ 2.11
RETREG3-212ENST00000593251 ZMYM3Q14202 1370 aa28.21■■■□□ 2.11
RETREG3-212ENST00000593251 ZNF644Q9H582 1327 aaPredicted RBP28.2■■■□□ 2.11
RETREG3-212ENST00000593251 ADGBQ8N7X0 1667 aa28.2■■■□□ 2.11
RETREG3-212ENST00000593251 EHBP1L1Q8N3D4 1523 aa28.2■■■□□ 2.1
RETREG3-212ENST00000593251 NPATQ14207 1427 aa28.18■■■□□ 2.1
RETREG3-212ENST00000593251 NCOA1Q15788 1441 aa28.18■■■□□ 2.1
RETREG3-212ENST00000593251 CAMSAP1Q5T5Y3 1602 aa28.18■■■□□ 2.1
RETREG3-212ENST00000593251 MYO3AQ8NEV4 1616 aa28.15■■■□□ 2.1
RETREG3-212ENST00000593251 GGT6Q6P531 493 aa28.15■■■□□ 2.1
RETREG3-212ENST00000593251 CEP162Q5TB80 1403 aa28.13■■■□□ 2.09
RETREG3-212ENST00000593251 LTBP4Q8N2S1 1624 aa28.13■■■□□ 2.09
RETREG3-212ENST00000593251 MBD5Q9P267 1494 aa28.12■■■□□ 2.09
RETREG3-212ENST00000593251 ZNF142P52746 1687 aaPredicted RBP28.12■■■□□ 2.09
RETREG3-212ENST00000593251 PTPRKQ15262 1439 aa28.09■■■□□ 2.09
RETREG3-212ENST00000593251 NCKAP5LQ9HCH0 1330 aa28.07■■■□□ 2.08
RETREG3-212ENST00000593251 CEP170BQ9Y4F5 1589 aaPredicted RBP28.07■■■□□ 2.08
RETREG3-212ENST00000593251 RTEL1-TNFRSF6BF6WH68 1400 aa28.03■■■□□ 2.08
RETREG3-212ENST00000593251 NCOA2Q15596 1464 aa28.02■■■□□ 2.08
RETREG3-212ENST00000593251 CAMSAP2Q08AD1 1489 aa28.01■■■□□ 2.07
RETREG3-212ENST00000593251 DHX29Q7Z478 1369 aaKnown RBP27.99■■■□□ 2.07
RETREG3-212ENST00000593251 PPP6R1Q9UPN7 881 aa27.99■■■□□ 2.07
RETREG3-212ENST00000593251 CCDC141Q6ZP82 1450 aa27.99■■■□□ 2.07
RETREG3-212ENST00000593251 PLA2R1Q13018 1463 aa27.98■■■□□ 2.07
RETREG3-212ENST00000593251 IQSEC2Q5JU85 1478 aa27.97■■■□□ 2.07
RETREG3-212ENST00000593251 ZNF335Q9H4Z2 1342 aaPredicted RBP27.96■■■□□ 2.07
RETREG3-212ENST00000593251 TCOF1Q13428 1488 aaKnown RBP27.95■■■□□ 2.07
RETREG3-212ENST00000593251 KIF3BO15066 747 aa27.95■■■□□ 2.06
RETREG3-212ENST00000593251 DNMT1P26358 1616 aaKnown RBP27.94■■■□□ 2.06
RETREG3-212ENST00000593251 DISP3Q9P2K9 1392 aa27.94■■■□□ 2.06
RETREG3-212ENST00000593251 PKD2Q13563 968 aa27.93■■■□□ 2.06
RETREG3-212ENST00000593251 A2ML1A8K2U0 1454 aa27.92■■■□□ 2.06
RETREG3-212ENST00000593251 KDM5DQ9BY66 1539 aa27.9■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 143.2 ms