RNA–Protein interactions for RNA: ENST00000592776.1

PTPN2-215, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 5

Gene PTPN2, Length 772 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-215ENST00000592776 ZMYM4Q5VZL5 1548 aa35.62■■■■□ 3.29
PTPN2-215ENST00000592776 FYCO1Q9BQS8 1478 aa35.61■■■■□ 3.29
PTPN2-215ENST00000592776 POGZQ7Z3K3 1410 aa35.61■■■■□ 3.29
PTPN2-215ENST00000592776 ARHGAP5Q13017 1502 aa35.6■■■■□ 3.29
PTPN2-215ENST00000592776 BCORL1Q5H9F3 1711 aa35.59■■■■□ 3.29
PTPN2-215ENST00000592776 ZFYVE16Q7Z3T8 1539 aa35.58■■■■□ 3.29
PTPN2-215ENST00000592776 HECW2Q9P2P5 1572 aa35.58■■■■□ 3.29
PTPN2-215ENST00000592776 PTPRMP28827 1452 aa35.54■■■■□ 3.28
PTPN2-215ENST00000592776 SIGLEC1Q9BZZ2 1709 aa35.54■■■■□ 3.28
PTPN2-215ENST00000592776 CDC42BPBQ9Y5S2 1711 aa35.53■■■■□ 3.28
PTPN2-215ENST00000592776 AFAP1Q8N556 730 aa35.52■■■■□ 3.28
PTPN2-215ENST00000592776 MADDQ8WXG6 1647 aa35.52■■■■□ 3.28
PTPN2-215ENST00000592776 MAGI2Q86UL8 1455 aa35.52■■■■□ 3.28
PTPN2-215ENST00000592776 MLECQ14165 292 aa35.46■■■■□ 3.27
PTPN2-215ENST00000592776 PREX2Q70Z35 1606 aa35.46■■■■□ 3.27
PTPN2-215ENST00000592776 CEP162Q5TB80 1403 aa35.45■■■■□ 3.27
PTPN2-215ENST00000592776 LOC105371045A0A1W2PR82 267 aa35.43■■■■□ 3.26
PTPN2-215ENST00000592776 ZNF518AQ6AHZ1 1483 aa35.41■■■■□ 3.26
PTPN2-215ENST00000592776 ARHGEF12Q9NZN5 1544 aa35.41■■■■□ 3.26
PTPN2-215ENST00000592776 ATP10AO60312 1499 aa35.41■■■■□ 3.26
PTPN2-215ENST00000592776 CDC42BPAQ5VT25 1732 aa35.4■■■■□ 3.26
PTPN2-215ENST00000592776 RIMS1Q86UR5 1692 aaKnown RBP35.4■■■■□ 3.26
PTPN2-215ENST00000592776 MYT1LQ9UL68 1186 aa35.39■■■■□ 3.26
PTPN2-215ENST00000592776 PLPPR3Q6T4P5 718 aa35.38■■■■□ 3.25
PTPN2-215ENST00000592776 TRAPPC8Q9Y2L5 1435 aa35.38■■■■□ 3.25
PTPN2-215ENST00000592776 KDM5CP41229 1560 aa35.37■■■■□ 3.25
PTPN2-215ENST00000592776 ZNF777Q9ULD5 760 aaPredicted RBP35.36■■■■□ 3.25
PTPN2-215ENST00000592776 ABCC1P33527 1531 aa35.35■■■■□ 3.25
PTPN2-215ENST00000592776 C9orf84Q5VXU9 1444 aa35.34■■■■□ 3.25
PTPN2-215ENST00000592776 GPATCH8Q9UKJ3 1502 aaKnown RBP35.33■■■■□ 3.25
PTPN2-215ENST00000592776 MTUS2Q5JR59 1369 aa35.3■■■■□ 3.24
PTPN2-215ENST00000592776 ITSN2Q9NZM3 1697 aa35.3■■■■□ 3.24
PTPN2-215ENST00000592776 DIP2CQ9Y2E4 1556 aa35.26■■■■□ 3.24
PTPN2-215ENST00000592776 SAMD9LQ8IVG5 1584 aa35.25■■■■□ 3.23
PTPN2-215ENST00000592776 MLH3Q9UHC1 1453 aa35.25■■■■□ 3.23
PTPN2-215ENST00000592776 HNRNPMP52272 730 aaKnown RBP eCLIP35.24■■■■□ 3.23
PTPN2-215ENST00000592776 ABCA6Q8N139 1617 aa35.24■■■■□ 3.23
PTPN2-215ENST00000592776 CCNB3Q8WWL7 1395 aa35.23■■■■□ 3.23
PTPN2-215ENST00000592776 FER1L4A9Z1Z3 1794 aa35.21■■■■□ 3.23
PTPN2-215ENST00000592776 CFDP1Q9UEE9 299 aaPredicted RBP35.21■■■■□ 3.23
PTPN2-215ENST00000592776 SYCP2Q9BX26 1530 aa35.19■■■■□ 3.22
PTPN2-215ENST00000592776 KIDINS220Q9ULH0 1771 aa35.16■■■■□ 3.22
PTPN2-215ENST00000592776 LMTK3Q96Q04 1460 aa35.16■■■■□ 3.22
PTPN2-215ENST00000592776 CEBPAP49715 358 aaPredicted RBP35.14■■■■□ 3.22
PTPN2-215ENST00000592776 EHBP1L1Q8N3D4 1523 aa35.14■■■■□ 3.22
PTPN2-215ENST00000592776 ZNF644Q9H582 1327 aaPredicted RBP35.12■■■■□ 3.21
PTPN2-215ENST00000592776 TIAM1Q13009 1591 aa35.12■■■■□ 3.21
PTPN2-215ENST00000592776 REREQ9P2R6 1566 aa35.12■■■■□ 3.21
PTPN2-215ENST00000592776 HSPA2P54652 639 aa35.09■■■■□ 3.21
PTPN2-215ENST00000592776 SPAG9O60271 1321 aaKnown RBP35.08■■■■□ 3.21
PTPN2-215ENST00000592776 KIAA1107Q9UPP5 1409 aa35.07■■■■□ 3.21
PTPN2-215ENST00000592776 PLEKHH2Q8IVE3 1493 aa35.04■■■■□ 3.2
PTPN2-215ENST00000592776 AGLP35573 1532 aa35.03■■■■□ 3.2
PTPN2-215ENST00000592776 ILDR1Q86SU0 546 aaPredicted RBP35.03■■■■□ 3.2
PTPN2-215ENST00000592776 VPS8Q8N3P4 1428 aa35.03■■■■□ 3.2
PTPN2-215ENST00000592776 NCOA2Q15596 1464 aa34.99■■■■□ 3.19
PTPN2-215ENST00000592776 ATP7AQ04656 1500 aa34.98■■■■□ 3.19
PTPN2-215ENST00000592776 MBD5Q9P267 1494 aa34.95■■■■□ 3.19
PTPN2-215ENST00000592776 INO80Q9ULG1 1556 aaPredicted RBP34.95■■■■□ 3.18
PTPN2-215ENST00000592776 SUPT6HQ7KZ85 1726 aaKnown RBP34.94■■■■□ 3.18
PTPN2-215ENST00000592776 ESF1Q9H501 851 aaKnown RBP34.91■■■■□ 3.18
PTPN2-215ENST00000592776 KANK4Q5T7N3 995 aaPredicted RBP34.9■■■■□ 3.18
PTPN2-215ENST00000592776 LRRC9Q6ZRR7 1453 aa34.89■■■■□ 3.18
PTPN2-215ENST00000592776 A2MP01023 1474 aa34.88■■■■□ 3.17
PTPN2-215ENST00000592776 C3P01024 1663 aa34.87■■■■□ 3.17
PTPN2-215ENST00000592776 PREX1Q8TCU6 1659 aa34.84■■■■□ 3.17
PTPN2-215ENST00000592776 CAMSAP2Q08AD1 1489 aa34.84■■■■□ 3.17
PTPN2-215ENST00000592776 PLXNC1O60486 1568 aa34.83■■■■□ 3.17
PTPN2-215ENST00000592776 GGT6Q6P531 493 aa34.79■■■■□ 3.16
PTPN2-215ENST00000592776 CNTLNQ9NXG0 1405 aa34.77■■■■□ 3.16
PTPN2-215ENST00000592776 RTEL1-TNFRSF6BF6WH68 1400 aa34.76■■■■□ 3.16
PTPN2-215ENST00000592776 UHRF1BP1Q6BDS2 1440 aa34.76■■■■□ 3.16
PTPN2-215ENST00000592776 CCDC141Q6ZP82 1450 aa34.76■■■■□ 3.15
PTPN2-215ENST00000592776 ADGBQ8N7X0 1667 aa34.75■■■■□ 3.15
PTPN2-215ENST00000592776 MAP3K1Q13233 1512 aa34.75■■■■□ 3.15
PTPN2-215ENST00000592776 ZMYM3Q14202 1370 aa34.73■■■■□ 3.15
PTPN2-215ENST00000592776 SETD1BQ9UPS6 1966 aaKnown RBP34.72■■■■□ 3.15
PTPN2-215ENST00000592776 CLTCQ00610 1675 aaKnown RBP34.7■■■■□ 3.14
PTPN2-215ENST00000592776 DHX29Q7Z478 1369 aaKnown RBP34.69■■■■□ 3.14
PTPN2-215ENST00000592776 RSPH4AQ5TD94 716 aa34.68■■■■□ 3.14
PTPN2-215ENST00000592776 MROH2AA6NES4 1674 aa34.66■■■■□ 3.14
PTPN2-215ENST00000592776 ARHGEF5Q12774 1597 aa34.65■■■■□ 3.14
PTPN2-215ENST00000592776 STRCQ7RTU9 1775 aa34.62■■■■□ 3.13
PTPN2-215ENST00000592776 KIF3BO15066 747 aa34.62■■■■□ 3.13
PTPN2-215ENST00000592776 TSPY4P0CV99 314 aa34.62■■■■□ 3.13
PTPN2-215ENST00000592776 TSPY10P0CW01 314 aa34.62■■■■□ 3.13
PTPN2-215ENST00000592776 MYOM3Q5VTT5 1437 aa34.62■■■■□ 3.13
PTPN2-215ENST00000592776 APLP2Q06481 763 aa34.6■■■■□ 3.13
PTPN2-215ENST00000592776 NPATQ14207 1427 aa34.58■■■■□ 3.13
PTPN2-215ENST00000592776 FBXO41Q8TF61 875 aa34.58■■■■□ 3.13
PTPN2-215ENST00000592776 PPP6R1Q9UPN7 881 aa34.56■■■■□ 3.12
PTPN2-215ENST00000592776 PTPRKQ15262 1439 aa34.55■■■■□ 3.12
PTPN2-215ENST00000592776 MIA2Q96PC5 1412 aa34.55■■■■□ 3.12
PTPN2-215ENST00000592776 DMRT2Q9Y5R5 561 aa34.48■■■■□ 3.11
PTPN2-215ENST00000592776 MAST1Q9Y2H9 1570 aa34.47■■■■□ 3.11
PTPN2-215ENST00000592776 CERKQ8TCT0 537 aa34.46■■■■□ 3.11
PTPN2-215ENST00000592776 FBXO31Q5XUX0 539 aaPredicted RBP34.45■■■■□ 3.11
PTPN2-215ENST00000592776 NCOA1Q15788 1441 aa34.44■■■■□ 3.1
PTPN2-215ENST00000592776 WASHC2CQ9Y4E1 1318 aa34.43■■■■□ 3.1
PTPN2-215ENST00000592776 CAMSAP1Q5T5Y3 1602 aa34.43■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms