RNA–Protein interactions for RNA: ENST00000592391.5

DDX39A-217, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,080 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-217ENST00000592391 SCAPERQ9BY12 1400 aa23.08■■□□□ 1.28
DDX39A-217ENST00000592391 PREX2Q70Z35 1606 aa23.06■■□□□ 1.28
DDX39A-217ENST00000592391 EHBP1L1Q8N3D4 1523 aa23.05■■□□□ 1.28
DDX39A-217ENST00000592391 KDM4FA0A1W2PPD8 638 aa23.05■■□□□ 1.28
DDX39A-217ENST00000592391 CDC42BPBQ9Y5S2 1711 aa23.05■■□□□ 1.28
DDX39A-217ENST00000592391 POGZQ7Z3K3 1410 aa23.04■■□□□ 1.28
DDX39A-217ENST00000592391 ZMYM4Q5VZL5 1548 aa23.02■■□□□ 1.28
DDX39A-217ENST00000592391 GPATCH8Q9UKJ3 1502 aaKnown RBP23.02■■□□□ 1.28
DDX39A-217ENST00000592391 CDC42BPAQ5VT25 1732 aa23.02■■□□□ 1.28
DDX39A-217ENST00000592391 TIAM1Q13009 1591 aa23.01■■□□□ 1.27
DDX39A-217ENST00000592391 CCNB3Q8WWL7 1395 aa22.99■■□□□ 1.27
DDX39A-217ENST00000592391 MAGI2Q86UL8 1455 aa22.98■■□□□ 1.27
DDX39A-217ENST00000592391 ARHGEF40Q8TER5 1519 aa22.98■■□□□ 1.27
DDX39A-217ENST00000592391 ZNF518AQ6AHZ1 1483 aa22.97■■□□□ 1.27
DDX39A-217ENST00000592391 MAP3K1Q13233 1512 aa22.96■■□□□ 1.27
DDX39A-217ENST00000592391 ABCC1P33527 1531 aa22.95■■□□□ 1.26
DDX39A-217ENST00000592391 ZFYVE16Q7Z3T8 1539 aa22.94■■□□□ 1.26
DDX39A-217ENST00000592391 CFDP1Q9UEE9 299 aaPredicted RBP22.94■■□□□ 1.26
DDX39A-217ENST00000592391 LRRC9Q6ZRR7 1453 aa22.93■■□□□ 1.26
DDX39A-217ENST00000592391 YEATS2Q9ULM3 1422 aa22.93■■□□□ 1.26
DDX39A-217ENST00000592391 AFAP1Q8N556 730 aa22.93■■□□□ 1.26
DDX39A-217ENST00000592391 ARHGEF12Q9NZN5 1544 aa22.92■■□□□ 1.26
DDX39A-217ENST00000592391 ZNF777Q9ULD5 760 aaPredicted RBP22.92■■□□□ 1.26
DDX39A-217ENST00000592391 KDM5CP41229 1560 aa22.92■■□□□ 1.26
DDX39A-217ENST00000592391 SAMD9LQ8IVG5 1584 aa22.91■■□□□ 1.26
DDX39A-217ENST00000592391 NCOA2Q15596 1464 aa22.91■■□□□ 1.26
DDX39A-217ENST00000592391 SUPT6HQ7KZ85 1726 aaKnown RBP22.91■■□□□ 1.26
DDX39A-217ENST00000592391 TRAPPC8Q9Y2L5 1435 aa22.9■■□□□ 1.26
DDX39A-217ENST00000592391 ITSN2Q9NZM3 1697 aa22.89■■□□□ 1.25
DDX39A-217ENST00000592391 PLEKHH2Q8IVE3 1493 aa22.87■■□□□ 1.25
DDX39A-217ENST00000592391 ARID4BQ4LE39 1312 aaPredicted RBP22.86■■□□□ 1.25
DDX39A-217ENST00000592391 KIAA1107Q9UPP5 1409 aa22.86■■□□□ 1.25
DDX39A-217ENST00000592391 KANK4Q5T7N3 995 aaPredicted RBP22.86■■□□□ 1.25
DDX39A-217ENST00000592391 HECW2Q9P2P5 1572 aa22.85■■□□□ 1.25
DDX39A-217ENST00000592391 APLP2Q06481 763 aa22.85■■□□□ 1.25
DDX39A-217ENST00000592391 SYCP2Q9BX26 1530 aa22.85■■□□□ 1.25
DDX39A-217ENST00000592391 MLH3Q9UHC1 1453 aa22.85■■□□□ 1.25
DDX39A-217ENST00000592391 ATP10AO60312 1499 aa22.84■■□□□ 1.25
DDX39A-217ENST00000592391 HNRNPMP52272 730 aaKnown RBP eCLIP22.83■■□□□ 1.256e-8■■■■□ 24.6
DDX39A-217ENST00000592391 MYT1LQ9UL68 1186 aa22.82■■□□□ 1.24
DDX39A-217ENST00000592391 C9orf84Q5VXU9 1444 aa22.81■■□□□ 1.24
DDX39A-217ENST00000592391 ZNF644Q9H582 1327 aaPredicted RBP22.81■■□□□ 1.24
DDX39A-217ENST00000592391 BCORL1Q5H9F3 1711 aa22.79■■□□□ 1.24
DDX39A-217ENST00000592391 ADAMTSL3P82987 1691 aa22.79■■□□□ 1.24
DDX39A-217ENST00000592391 SIGLEC1Q9BZZ2 1709 aa22.78■■□□□ 1.24
DDX39A-217ENST00000592391 DIP2CQ9Y2E4 1556 aa22.78■■□□□ 1.24
DDX39A-217ENST00000592391 SPAG9O60271 1321 aaKnown RBP22.77■■□□□ 1.24
DDX39A-217ENST00000592391 MBD5Q9P267 1494 aa22.76■■□□□ 1.23
DDX39A-217ENST00000592391 ABCA6Q8N139 1617 aa22.75■■□□□ 1.23
DDX39A-217ENST00000592391 KIDINS220Q9ULH0 1771 aa22.75■■□□□ 1.23
DDX39A-217ENST00000592391 CAMSAP2Q08AD1 1489 aa22.74■■□□□ 1.23
DDX39A-217ENST00000592391 REREQ9P2R6 1566 aa22.74■■□□□ 1.23
DDX39A-217ENST00000592391 MYOM3Q5VTT5 1437 aa22.72■■□□□ 1.23
DDX39A-217ENST00000592391 MADDQ8WXG6 1647 aa22.71■■□□□ 1.23
DDX39A-217ENST00000592391 ATP7AQ04656 1500 aa22.7■■□□□ 1.22
DDX39A-217ENST00000592391 INO80Q9ULG1 1556 aaPredicted RBP22.7■■□□□ 1.22
DDX39A-217ENST00000592391 PTPRMP28827 1452 aa22.69■■□□□ 1.22
DDX39A-217ENST00000592391 MIA2Q96PC5 1412 aa22.69■■□□□ 1.22
DDX39A-217ENST00000592391 MLECQ14165 292 aa22.69■■□□□ 1.22
DDX39A-217ENST00000592391 RSPH4AQ5TD94 716 aa22.68■■□□□ 1.22
DDX39A-217ENST00000592391 CCDC141Q6ZP82 1450 aa22.67■■□□□ 1.22
DDX39A-217ENST00000592391 AGLP35573 1532 aa22.67■■□□□ 1.22
DDX39A-217ENST00000592391 RTEL1-TNFRSF6BF6WH68 1400 aa22.65■■□□□ 1.22
DDX39A-217ENST00000592391 ARHGEF5Q12774 1597 aa22.64■■□□□ 1.22
DDX39A-217ENST00000592391 RIMS1Q86UR5 1692 aaKnown RBP22.63■■□□□ 1.21
DDX39A-217ENST00000592391 A2MP01023 1474 aa22.6■■□□□ 1.21
DDX39A-217ENST00000592391 FER1L4A9Z1Z3 1794 aa22.6■■□□□ 1.21
DDX39A-217ENST00000592391 PLXNC1O60486 1568 aa22.59■■□□□ 1.21
DDX39A-217ENST00000592391 TSPY4P0CV99 314 aa22.58■■□□□ 1.21
DDX39A-217ENST00000592391 TSPY10P0CW01 314 aa22.58■■□□□ 1.21
DDX39A-217ENST00000592391 FGD6Q6ZV73 1430 aa22.57■■□□□ 1.2
DDX39A-217ENST00000592391 ADGBQ8N7X0 1667 aa22.57■■□□□ 1.2
DDX39A-217ENST00000592391 PTPN23Q9H3S7 1636 aa22.55■■□□□ 1.2
DDX39A-217ENST00000592391 TCOF1Q13428 1488 aaKnown RBP22.54■■□□□ 1.2
DDX39A-217ENST00000592391 DHX29Q7Z478 1369 aaKnown RBP22.53■■□□□ 1.2
DDX39A-217ENST00000592391 MAST1Q9Y2H9 1570 aa22.52■■□□□ 1.2
DDX39A-217ENST00000592391 PLPPR3Q6T4P5 718 aa22.5■■□□□ 1.19
DDX39A-217ENST00000592391 ESF1Q9H501 851 aaKnown RBP22.5■■□□□ 1.19
DDX39A-217ENST00000592391 ABCC5O15440 1437 aa22.48■■□□□ 1.19
DDX39A-217ENST00000592391 CNTLNQ9NXG0 1405 aa22.48■■□□□ 1.19
DDX39A-217ENST00000592391 SHANK2Q9UPX8 1470 aa22.47■■□□□ 1.19
DDX39A-217ENST00000592391 CEBPAP49715 358 aaPredicted RBP22.45■■□□□ 1.18
DDX39A-217ENST00000592391 GGT6Q6P531 493 aa22.45■■□□□ 1.18
DDX39A-217ENST00000592391 DAPK1P53355 1430 aa22.45■■□□□ 1.18
DDX39A-217ENST00000592391 DNMT1P26358 1616 aaKnown RBP22.44■■□□□ 1.18
DDX39A-217ENST00000592391 CROCC2H7BZ55 1655 aa22.43■■□□□ 1.18
DDX39A-217ENST00000592391 KIF3BO15066 747 aa22.43■■□□□ 1.18
DDX39A-217ENST00000592391 PPP6R1Q9UPN7 881 aa22.43■■□□□ 1.18
DDX39A-217ENST00000592391 LMTK3Q96Q04 1460 aa22.41■■□□□ 1.18
DDX39A-217ENST00000592391 FAM50AQ14320 339 aaKnown RBP22.41■■□□□ 1.18
DDX39A-217ENST00000592391 PPARGC1BQ86YN6 1023 aaKnown RBP22.41■■□□□ 1.18
DDX39A-217ENST00000592391 MROH2AA6NES4 1674 aa22.39■■□□□ 1.18
DDX39A-217ENST00000592391 C3P01024 1663 aa22.39■■□□□ 1.18
DDX39A-217ENST00000592391 ZMYM3Q14202 1370 aa22.38■■□□□ 1.17
DDX39A-217ENST00000592391 KIF15Q9NS87 1388 aa22.38■■□□□ 1.17
DDX39A-217ENST00000592391 DUOX2Q9NRD8 1548 aa22.37■■□□□ 1.17
DDX39A-217ENST00000592391 CLTCQ00610 1675 aaKnown RBP22.36■■□□□ 1.17
DDX39A-217ENST00000592391 RRP7BPQ9NSQ0 103 aa22.35■■□□□ 1.17
DDX39A-217ENST00000592391 CHIC2Q9UKJ5 165 aa22.34■■□□□ 1.17
DDX39A-217ENST00000592391 FAM135AQ9P2D6 1515 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms