RNA–Protein interactions for RNA: ENST00000592266.1

RANBP3-227, Transcript of RAN binding protein 3, humanhuman

TSL 4

Gene RANBP3, Length 589 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RANBP3-227ENST00000592266 POGZQ7Z3K3 1410 aa28.02■■■□□ 2.08
RANBP3-227ENST00000592266 BCORL1Q5H9F3 1711 aa28.02■■■□□ 2.08
RANBP3-227ENST00000592266 ZFYVE16Q7Z3T8 1539 aa28.02■■■□□ 2.08
RANBP3-227ENST00000592266 PTPRMP28827 1452 aa28.01■■■□□ 2.07
RANBP3-227ENST00000592266 PCF11O94913 1555 aaKnown RBP28■■■□□ 2.07
RANBP3-227ENST00000592266 LRRIQ1Q96JM4 1722 aa27.97■■■□□ 2.07
RANBP3-227ENST00000592266 ARHGAP5Q13017 1502 aa27.97■■■□□ 2.07
RANBP3-227ENST00000592266 FYCO1Q9BQS8 1478 aa27.96■■■□□ 2.07
RANBP3-227ENST00000592266 YEATS2Q9ULM3 1422 aa27.95■■■□□ 2.07
RANBP3-227ENST00000592266 MADDQ8WXG6 1647 aa27.94■■■□□ 2.06
RANBP3-227ENST00000592266 ZNF518AQ6AHZ1 1483 aa27.91■■■□□ 2.06
RANBP3-227ENST00000592266 ATP10AO60312 1499 aa27.86■■■□□ 2.05
RANBP3-227ENST00000592266 C9orf84Q5VXU9 1444 aa27.85■■■□□ 2.05
RANBP3-227ENST00000592266 PREX2Q70Z35 1606 aa27.84■■■□□ 2.05
RANBP3-227ENST00000592266 RIMS1Q86UR5 1692 aaKnown RBP27.84■■■□□ 2.05
RANBP3-227ENST00000592266 KDM5CP41229 1560 aa27.82■■■□□ 2.04
RANBP3-227ENST00000592266 CDC42BPBQ9Y5S2 1711 aa27.81■■■□□ 2.04
RANBP3-227ENST00000592266 AFAP1Q8N556 730 aa27.8■■■□□ 2.04
RANBP3-227ENST00000592266 MYT1LQ9UL68 1186 aa27.8■■■□□ 2.04
RANBP3-227ENST00000592266 MLECQ14165 292 aa27.79■■■□□ 2.04
RANBP3-227ENST00000592266 SIGLEC1Q9BZZ2 1709 aa27.78■■■□□ 2.04
RANBP3-227ENST00000592266 ABCC1P33527 1531 aa27.77■■■□□ 2.04
RANBP3-227ENST00000592266 MLH3Q9UHC1 1453 aa27.75■■■□□ 2.03
RANBP3-227ENST00000592266 FER1L4A9Z1Z3 1794 aa27.72■■■□□ 2.03
RANBP3-227ENST00000592266 CDC42BPAQ5VT25 1732 aa27.72■■■□□ 2.03
RANBP3-227ENST00000592266 ARHGEF12Q9NZN5 1544 aa27.72■■■□□ 2.03
RANBP3-227ENST00000592266 LMTK3Q96Q04 1460 aa27.71■■■□□ 2.03
RANBP3-227ENST00000592266 TRAPPC8Q9Y2L5 1435 aa27.71■■■□□ 2.03
RANBP3-227ENST00000592266 ITSN2Q9NZM3 1697 aa27.7■■■□□ 2.02
RANBP3-227ENST00000592266 MTUS2Q5JR59 1369 aa27.7■■■□□ 2.02
RANBP3-227ENST00000592266 REREQ9P2R6 1566 aa27.69■■■□□ 2.02
RANBP3-227ENST00000592266 DIP2CQ9Y2E4 1556 aa27.69■■■□□ 2.02
RANBP3-227ENST00000592266 PLPPR3Q6T4P5 718 aa27.69■■■□□ 2.02
RANBP3-227ENST00000592266 CEP162Q5TB80 1403 aa27.68■■■□□ 2.02
RANBP3-227ENST00000592266 GPATCH8Q9UKJ3 1502 aaKnown RBP27.67■■■□□ 2.02
RANBP3-227ENST00000592266 ZNF777Q9ULD5 760 aaPredicted RBP27.67■■■□□ 2.02
RANBP3-227ENST00000592266 ILDR1Q86SU0 546 aaPredicted RBP27.66■■■□□ 2.02
RANBP3-227ENST00000592266 CCNB3Q8WWL7 1395 aa27.65■■■□□ 2.02
RANBP3-227ENST00000592266 ABCA6Q8N139 1617 aa27.64■■■□□ 2.02
RANBP3-227ENST00000592266 CFDP1Q9UEE9 299 aaPredicted RBP27.63■■■□□ 2.01
RANBP3-227ENST00000592266 PLEKHH2Q8IVE3 1493 aa27.63■■■□□ 2.01
RANBP3-227ENST00000592266 SAMD9LQ8IVG5 1584 aa27.61■■■□□ 2.01
RANBP3-227ENST00000592266 AGLP35573 1532 aa27.61■■■□□ 2.01
RANBP3-227ENST00000592266 SYCP2Q9BX26 1530 aa27.6■■■□□ 2.01
RANBP3-227ENST00000592266 KIAA1107Q9UPP5 1409 aa27.59■■■□□ 2.01
RANBP3-227ENST00000592266 EHBP1L1Q8N3D4 1523 aa27.59■■■□□ 2.01
RANBP3-227ENST00000592266 KIDINS220Q9ULH0 1771 aa27.57■■■□□ 2
RANBP3-227ENST00000592266 ESF1Q9H501 851 aaKnown RBP27.56■■■□□ 2
RANBP3-227ENST00000592266 SPAG9O60271 1321 aaKnown RBP27.56■■■□□ 2
RANBP3-227ENST00000592266 HNRNPMP52272 730 aaKnown RBP eCLIP27.54■■■□□ 27e-7■■■□□ 17.2
RANBP3-227ENST00000592266 HSPA2P54652 639 aa27.54■■■□□ 2
RANBP3-227ENST00000592266 CEBPAP49715 358 aaPredicted RBP27.51■■□□□ 1.99
RANBP3-227ENST00000592266 TIAM1Q13009 1591 aa27.49■■□□□ 1.99
RANBP3-227ENST00000592266 PREX1Q8TCU6 1659 aa27.49■■□□□ 1.99
RANBP3-227ENST00000592266 ATP7AQ04656 1500 aa27.48■■□□□ 1.99
RANBP3-227ENST00000592266 CNTLNQ9NXG0 1405 aa27.48■■□□□ 1.99
RANBP3-227ENST00000592266 UHRF1BP1Q6BDS2 1440 aa27.45■■□□□ 1.98
RANBP3-227ENST00000592266 INO80Q9ULG1 1556 aaPredicted RBP27.44■■□□□ 1.98
RANBP3-227ENST00000592266 SETD1BQ9UPS6 1966 aaKnown RBP27.41■■□□□ 1.98
RANBP3-227ENST00000592266 VPS8Q8N3P4 1428 aa27.41■■□□□ 1.98
RANBP3-227ENST00000592266 A2MP01023 1474 aa27.4■■□□□ 1.98
RANBP3-227ENST00000592266 FBXO41Q8TF61 875 aa27.4■■□□□ 1.98
RANBP3-227ENST00000592266 SUPT6HQ7KZ85 1726 aaKnown RBP27.4■■□□□ 1.98
RANBP3-227ENST00000592266 ZNF644Q9H582 1327 aaPredicted RBP27.4■■□□□ 1.98
RANBP3-227ENST00000592266 C3P01024 1663 aa27.4■■□□□ 1.98
RANBP3-227ENST00000592266 NCOA2Q15596 1464 aa27.39■■□□□ 1.98
RANBP3-227ENST00000592266 LOC105371045A0A1W2PR82 267 aa27.39■■□□□ 1.98
RANBP3-227ENST00000592266 PLXNC1O60486 1568 aa27.38■■□□□ 1.97
RANBP3-227ENST00000592266 MBD5Q9P267 1494 aa27.38■■□□□ 1.97
RANBP3-227ENST00000592266 RTEL1-TNFRSF6BF6WH68 1400 aa27.35■■□□□ 1.97
RANBP3-227ENST00000592266 RSPH4AQ5TD94 716 aa27.33■■□□□ 1.97
RANBP3-227ENST00000592266 MROH2AA6NES4 1674 aa27.33■■□□□ 1.97
RANBP3-227ENST00000592266 ADGBQ8N7X0 1667 aa27.33■■□□□ 1.97
RANBP3-227ENST00000592266 DMRT2Q9Y5R5 561 aa27.32■■□□□ 1.96
RANBP3-227ENST00000592266 CAMSAP2Q08AD1 1489 aa27.31■■□□□ 1.96
RANBP3-227ENST00000592266 CCDC141Q6ZP82 1450 aa27.31■■□□□ 1.96
RANBP3-227ENST00000592266 NPATQ14207 1427 aa27.3■■□□□ 1.96
RANBP3-227ENST00000592266 LRRC9Q6ZRR7 1453 aa27.3■■□□□ 1.96
RANBP3-227ENST00000592266 PPP6R1Q9UPN7 881 aa27.29■■□□□ 1.96
RANBP3-227ENST00000592266 ZMYM3Q14202 1370 aa27.29■■□□□ 1.96
RANBP3-227ENST00000592266 GGT6Q6P531 493 aa27.28■■□□□ 1.96
RANBP3-227ENST00000592266 MAP3K1Q13233 1512 aa27.26■■□□□ 1.96
RANBP3-227ENST00000592266 DHX29Q7Z478 1369 aaKnown RBP27.24■■□□□ 1.95
RANBP3-227ENST00000592266 CLTCQ00610 1675 aaKnown RBP27.22■■□□□ 1.95
RANBP3-227ENST00000592266 ARHGEF5Q12774 1597 aa27.21■■□□□ 1.95
RANBP3-227ENST00000592266 STRCQ7RTU9 1775 aa27.2■■□□□ 1.95
RANBP3-227ENST00000592266 TSPY4P0CV99 314 aa27.2■■□□□ 1.94
RANBP3-227ENST00000592266 TSPY10P0CW01 314 aa27.2■■□□□ 1.94
RANBP3-227ENST00000592266 CERKQ8TCT0 537 aa27.19■■□□□ 1.94
RANBP3-227ENST00000592266 PTPRTO14522 1441 aa27.17■■□□□ 1.94
RANBP3-227ENST00000592266 KIF3BO15066 747 aa27.15■■□□□ 1.94
RANBP3-227ENST00000592266 KANK4Q5T7N3 995 aaPredicted RBP27.15■■□□□ 1.94
RANBP3-227ENST00000592266 PTPRKQ15262 1439 aa27.15■■□□□ 1.94
RANBP3-227ENST00000592266 NCOA1Q15788 1441 aa27.15■■□□□ 1.94
RANBP3-227ENST00000592266 APLP2Q06481 763 aa27.14■■□□□ 1.94
RANBP3-227ENST00000592266 FAM135AQ9P2D6 1515 aa27.14■■□□□ 1.94
RANBP3-227ENST00000592266 MIA2Q96PC5 1412 aa27.14■■□□□ 1.93
RANBP3-227ENST00000592266 MYOM3Q5VTT5 1437 aa27.13■■□□□ 1.93
RANBP3-227ENST00000592266 CAMSAP1Q5T5Y3 1602 aa27.09■■□□□ 1.93
RANBP3-227ENST00000592266 MYO3AQ8NEV4 1616 aa27.09■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms