RNA–Protein interactions for RNA: ENST00000591960.1

RDH13-219, Transcript of retinol dehydrogenase 13, humanhuman

TSL 5

Gene RDH13, Length 1,328 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-219ENST00000591960 ADGRL1O94910 1474 aa21.73■■□□□ 1.07
RDH13-219ENST00000591960 EFCAB2Q5VUJ9 269 aa21.73■■□□□ 1.07
RDH13-219ENST00000591960 MTUS2Q5JR59 1369 aa21.72■■□□□ 1.07
RDH13-219ENST00000591960 EHBP1L1Q8N3D4 1523 aa21.71■■□□□ 1.07
RDH13-219ENST00000591960 SCAPERQ9BY12 1400 aa21.71■■□□□ 1.07
RDH13-219ENST00000591960 TIAM1Q13009 1591 aa21.7■■□□□ 1.06
RDH13-219ENST00000591960 KDM4FA0A1W2PPD8 638 aa21.7■■□□□ 1.06
RDH13-219ENST00000591960 ZMYM4Q5VZL5 1548 aa21.68■■□□□ 1.06
RDH13-219ENST00000591960 POGZQ7Z3K3 1410 aa21.68■■□□□ 1.06
RDH13-219ENST00000591960 GPATCH8Q9UKJ3 1502 aaKnown RBP21.67■■□□□ 1.06
RDH13-219ENST00000591960 ABCC1P33527 1531 aa21.64■■□□□ 1.05
RDH13-219ENST00000591960 ARHGEF40Q8TER5 1519 aa21.64■■□□□ 1.05
RDH13-219ENST00000591960 ARHGEF12Q9NZN5 1544 aa21.63■■□□□ 1.05
RDH13-219ENST00000591960 MAP3K1Q13233 1512 aa21.62■■□□□ 1.05
RDH13-219ENST00000591960 SAMD9LQ8IVG5 1584 aa21.62■■□□□ 1.05
RDH13-219ENST00000591960 ITSN2Q9NZM3 1697 aa21.62■■□□□ 1.05
RDH13-219ENST00000591960 CCNB3Q8WWL7 1395 aa21.61■■□□□ 1.05
RDH13-219ENST00000591960 YEATS2Q9ULM3 1422 aa21.6■■□□□ 1.05
RDH13-219ENST00000591960 LRRC9Q6ZRR7 1453 aa21.6■■□□□ 1.05
RDH13-219ENST00000591960 KDM5CP41229 1560 aa21.6■■□□□ 1.05
RDH13-219ENST00000591960 SUPT6HQ7KZ85 1726 aaKnown RBP21.6■■□□□ 1.05
RDH13-219ENST00000591960 ZNF518AQ6AHZ1 1483 aa21.59■■□□□ 1.05
RDH13-219ENST00000591960 ZFYVE16Q7Z3T8 1539 aa21.59■■□□□ 1.05
RDH13-219ENST00000591960 NCOA2Q15596 1464 aa21.58■■□□□ 1.05
RDH13-219ENST00000591960 MAGI2Q86UL8 1455 aa21.58■■□□□ 1.05
RDH13-219ENST00000591960 TRAPPC8Q9Y2L5 1435 aa21.58■■□□□ 1.04
RDH13-219ENST00000591960 AFAP1Q8N556 730 aa21.57■■□□□ 1.04
RDH13-219ENST00000591960 SIGLEC1Q9BZZ2 1709 aa21.56■■□□□ 1.04
RDH13-219ENST00000591960 KANK4Q5T7N3 995 aaPredicted RBP21.56■■□□□ 1.04
RDH13-219ENST00000591960 CFDP1Q9UEE9 299 aaPredicted RBP21.55■■□□□ 1.04
RDH13-219ENST00000591960 ZNF777Q9ULD5 760 aaPredicted RBP21.55■■□□□ 1.04
RDH13-219ENST00000591960 SYCP2Q9BX26 1530 aa21.54■■□□□ 1.04
RDH13-219ENST00000591960 HECW2Q9P2P5 1572 aa21.53■■□□□ 1.04
RDH13-219ENST00000591960 MLH3Q9UHC1 1453 aa21.5■■□□□ 1.03
RDH13-219ENST00000591960 BCORL1Q5H9F3 1711 aa21.5■■□□□ 1.03
RDH13-219ENST00000591960 KIAA1107Q9UPP5 1409 aa21.5■■□□□ 1.03
RDH13-219ENST00000591960 PLEKHH2Q8IVE3 1493 aa21.49■■□□□ 1.03
RDH13-219ENST00000591960 ZNF644Q9H582 1327 aaPredicted RBP21.49■■□□□ 1.03
RDH13-219ENST00000591960 ADAMTSL3P82987 1691 aa21.49■■□□□ 1.03
RDH13-219ENST00000591960 HNRNPMP52272 730 aaKnown RBP eCLIP21.49■■□□□ 1.03
RDH13-219ENST00000591960 DIP2CQ9Y2E4 1556 aa21.48■■□□□ 1.03
RDH13-219ENST00000591960 ABCA6Q8N139 1617 aa21.48■■□□□ 1.03
RDH13-219ENST00000591960 ATP10AO60312 1499 aa21.48■■□□□ 1.03
RDH13-219ENST00000591960 KIDINS220Q9ULH0 1771 aa21.48■■□□□ 1.03
RDH13-219ENST00000591960 C9orf84Q5VXU9 1444 aa21.46■■□□□ 1.03
RDH13-219ENST00000591960 ARID4BQ4LE39 1312 aaPredicted RBP21.45■■□□□ 1.03
RDH13-219ENST00000591960 MBD5Q9P267 1494 aa21.44■■□□□ 1.02
RDH13-219ENST00000591960 CAMSAP2Q08AD1 1489 aa21.43■■□□□ 1.02
RDH13-219ENST00000591960 APLP2Q06481 763 aa21.42■■□□□ 1.02
RDH13-219ENST00000591960 MADDQ8WXG6 1647 aa21.42■■□□□ 1.02
RDH13-219ENST00000591960 REREQ9P2R6 1566 aa21.41■■□□□ 1.02
RDH13-219ENST00000591960 INO80Q9ULG1 1556 aaPredicted RBP21.41■■□□□ 1.02
RDH13-219ENST00000591960 MYT1LQ9UL68 1186 aa21.41■■□□□ 1.02
RDH13-219ENST00000591960 ATP7AQ04656 1500 aa21.39■■□□□ 1.02
RDH13-219ENST00000591960 SPAG9O60271 1321 aaKnown RBP21.39■■□□□ 1.01
RDH13-219ENST00000591960 MYOM3Q5VTT5 1437 aa21.39■■□□□ 1.01
RDH13-219ENST00000591960 MIA2Q96PC5 1412 aa21.35■■□□□ 1.01
RDH13-219ENST00000591960 PTPRMP28827 1452 aa21.35■■□□□ 1.01
RDH13-219ENST00000591960 RIMS1Q86UR5 1692 aaKnown RBP21.34■■□□□ 1.01
RDH13-219ENST00000591960 CCDC141Q6ZP82 1450 aa21.34■■□□□ 1.01
RDH13-219ENST00000591960 ARHGEF5Q12774 1597 aa21.34■■□□□ 1.01
RDH13-219ENST00000591960 AGLP35573 1532 aa21.34■■□□□ 1.01
RDH13-219ENST00000591960 MLECQ14165 292 aa21.33■■□□□ 1.01
RDH13-219ENST00000591960 FER1L4A9Z1Z3 1794 aa21.32■■□□□ 1
RDH13-219ENST00000591960 RTEL1-TNFRSF6BF6WH68 1400 aa21.3■■□□□ 1
RDH13-219ENST00000591960 PLXNC1O60486 1568 aa21.3■■□□□ 1
RDH13-219ENST00000591960 ADGBQ8N7X0 1667 aa21.28■■□□□ 1
RDH13-219ENST00000591960 PTPN23Q9H3S7 1636 aa21.28■■□□□ 1
RDH13-219ENST00000591960 A2MP01023 1474 aa21.27■■□□□ 1
RDH13-219ENST00000591960 RSPH4AQ5TD94 716 aa21.27■□□□□ 0.99
RDH13-219ENST00000591960 FGD6Q6ZV73 1430 aa21.27■□□□□ 0.99
RDH13-219ENST00000591960 TCOF1Q13428 1488 aaKnown RBP21.24■□□□□ 0.99
RDH13-219ENST00000591960 MAST1Q9Y2H9 1570 aa21.23■□□□□ 0.99
RDH13-219ENST00000591960 TSPY4P0CV99 314 aa21.2■□□□□ 0.98
RDH13-219ENST00000591960 TSPY10P0CW01 314 aa21.2■□□□□ 0.98
RDH13-219ENST00000591960 CROCC2H7BZ55 1655 aa21.2■□□□□ 0.98
RDH13-219ENST00000591960 DHX29Q7Z478 1369 aaKnown RBP21.19■□□□□ 0.98
RDH13-219ENST00000591960 ABCC5O15440 1437 aa21.18■□□□□ 0.98
RDH13-219ENST00000591960 DNMT1P26358 1616 aaKnown RBP21.17■□□□□ 0.98
RDH13-219ENST00000591960 PLPPR3Q6T4P5 718 aa21.16■□□□□ 0.98
RDH13-219ENST00000591960 PPARGC1BQ86YN6 1023 aaKnown RBP21.15■□□□□ 0.98
RDH13-219ENST00000591960 C3P01024 1663 aa21.15■□□□□ 0.98
RDH13-219ENST00000591960 DAPK1P53355 1430 aa21.15■□□□□ 0.98
RDH13-219ENST00000591960 SHANK2Q9UPX8 1470 aa21.14■□□□□ 0.98
RDH13-219ENST00000591960 CEBPAP49715 358 aaPredicted RBP21.14■□□□□ 0.97
RDH13-219ENST00000591960 MROH2AA6NES4 1674 aa21.11■□□□□ 0.97
RDH13-219ENST00000591960 CLTCQ00610 1675 aaKnown RBP21.11■□□□□ 0.97
RDH13-219ENST00000591960 GGT6Q6P531 493 aa21.1■□□□□ 0.97
RDH13-219ENST00000591960 LMTK3Q96Q04 1460 aa21.1■□□□□ 0.97
RDH13-219ENST00000591960 CNTLNQ9NXG0 1405 aa21.1■□□□□ 0.97
RDH13-219ENST00000591960 KIF3BO15066 747 aa21.08■□□□□ 0.97
RDH13-219ENST00000591960 ESF1Q9H501 851 aaKnown RBP21.08■□□□□ 0.97
RDH13-219ENST00000591960 FAM50AQ14320 339 aaKnown RBP21.06■□□□□ 0.96
RDH13-219ENST00000591960 DUOX2Q9NRD8 1548 aa21.06■□□□□ 0.96
RDH13-219ENST00000591960 EIF2AK4Q9P2K8 1649 aaKnown RBP21.06■□□□□ 0.96
RDH13-219ENST00000591960 RNF17Q9BXT8 1623 aaKnown RBP21.05■□□□□ 0.96
RDH13-219ENST00000591960 PREX1Q8TCU6 1659 aa21.04■□□□□ 0.96
RDH13-219ENST00000591960 ZMYM3Q14202 1370 aa21.04■□□□□ 0.96
RDH13-219ENST00000591960 KIF15Q9NS87 1388 aa21.04■□□□□ 0.96
RDH13-219ENST00000591960 PPP6R1Q9UPN7 881 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 365 ms