RNA–Protein interactions for RNA: ENST00000591955.1

NPC1-213, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 561 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-213ENST00000591955 MS4A4AQ96JQ5 239 aa10.66□□□□□ -0.7
NPC1-213ENST00000591955 PTGER2P43116 358 aa10.61□□□□□ -0.71
NPC1-213ENST00000591955 RIOK3O14730 519 aaKnown RBP10.6□□□□□ -0.71
NPC1-213ENST00000591955 PHF8Q9UPP1 1060 aa10.6□□□□□ -0.71
NPC1-213ENST00000591955 RNF25Q96BH1 459 aaPredicted RBP10.59□□□□□ -0.71
NPC1-213ENST00000591955 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.58□□□□□ -0.72
NPC1-213ENST00000591955 ARSIQ5FYB1 569 aa10.58□□□□□ -0.72
NPC1-213ENST00000591955 ZFP91Q96JP5 570 aaPredicted RBP10.58□□□□□ -0.72
NPC1-213ENST00000591955 VGFO15240 615 aaPredicted RBP10.55□□□□□ -0.72
NPC1-213ENST00000591955 ZNF316A6NFI3 1004 aaPredicted RBP10.54□□□□□ -0.72
NPC1-213ENST00000591955 ANKRD13DQ6ZTN6 518 aa10.52□□□□□ -0.73
NPC1-213ENST00000591955 KHSRPQ92945 711 aaKnown RBP eCLIP10.52□□□□□ -0.73
NPC1-213ENST00000591955 LSM11P83369 360 aaKnown RBP eCLIP10.5□□□□□ -0.73
NPC1-213ENST00000591955 FBXO22Q8NEZ5 403 aa10.49□□□□□ -0.73
NPC1-213ENST00000591955 NLRP6P59044 892 aa10.48□□□□□ -0.73
NPC1-213ENST00000591955 KIF3CO14782 793 aa10.45□□□□□ -0.74
NPC1-213ENST00000591955 PBX2P40425 430 aa10.43□□□□□ -0.74
NPC1-213ENST00000591955 BCL11BQ9C0K0 894 aaPredicted RBP10.42□□□□□ -0.74
NPC1-213ENST00000591955 NUDT7P0C024 238 aa10.41□□□□□ -0.74
NPC1-213ENST00000591955 POTEEQ6S8J3 1075 aa10.41□□□□□ -0.74
NPC1-213ENST00000591955 C2orf72A6NCS6 295 aa10.4□□□□□ -0.74
NPC1-213ENST00000591955 MFRPQ9BY79 579 aa10.4□□□□□ -0.74
NPC1-213ENST00000591955 SLC34A2O95436 690 aa10.38□□□□□ -0.75
NPC1-213ENST00000591955 LHX6Q9UPM6 363 aa10.38□□□□□ -0.75
NPC1-213ENST00000591955 TAOK2Q9UL54 1235 aa10.37□□□□□ -0.75
NPC1-213ENST00000591955 PCDHGA4Q9Y5G9 962 aa10.36□□□□□ -0.75
NPC1-213ENST00000591955 STK24Q9Y6E0 443 aa10.36□□□□□ -0.75
NPC1-213ENST00000591955 AXIN2Q9Y2T1 843 aa10.35□□□□□ -0.75
NPC1-213ENST00000591955 PLA2G2EQ9NZK7 142 aa10.33□□□□□ -0.76
NPC1-213ENST00000591955 HCSTQ9UBK5 93 aa10.32□□□□□ -0.76
NPC1-213ENST00000591955 CCDC180Q9P1Z9 1646 aa10.3□□□□□ -0.76
NPC1-213ENST00000591955 STK25O00506 426 aa10.29□□□□□ -0.76
NPC1-213ENST00000591955 ADGRD1Q6QNK2 874 aa10.29□□□□□ -0.76
NPC1-213ENST00000591955 ARHGAP33O14559 1287 aa10.28□□□□□ -0.76
NPC1-213ENST00000591955 TMC2Q8TDI7 906 aa10.27□□□□□ -0.77
NPC1-213ENST00000591955 KDM4FA0A1W2PPD8 638 aa10.26□□□□□ -0.77
NPC1-213ENST00000591955 PSDA5PKW4 1024 aaPredicted RBP10.26□□□□□ -0.77
NPC1-213ENST00000591955 TK2O00142 265 aa10.23□□□□□ -0.77
NPC1-213ENST00000591955 HRO43593 1189 aa10.23□□□□□ -0.77
NPC1-213ENST00000591955 PTCD2Q8WV60 388 aaKnown RBP10.21□□□□□ -0.77
NPC1-213ENST00000591955 DMRTA1Q5VZB9 504 aa10.2□□□□□ -0.78
NPC1-213ENST00000591955 PPP1R37O75864 691 aa10.19□□□□□ -0.78
NPC1-213ENST00000591955 ECM2O94769 699 aaPredicted RBP10.18□□□□□ -0.78
NPC1-213ENST00000591955 PSEN2P49810 448 aa10.18□□□□□ -0.78
NPC1-213ENST00000591955 RGL2O15211 777 aa10.13□□□□□ -0.79
NPC1-213ENST00000591955 FOXK1P85037 733 aa10.13□□□□□ -0.79
NPC1-213ENST00000591955 PPP4R3BQ5MIZ7 849 aa10.12□□□□□ -0.79
NPC1-213ENST00000591955 KCTD12Q96CX2 325 aaKnown RBP10.12□□□□□ -0.79
NPC1-213ENST00000591955 PLPP6Q8IY26 295 aa10.11□□□□□ -0.79
NPC1-213ENST00000591955 PKD2Q13563 968 aa10.09□□□□□ -0.79
NPC1-213ENST00000591955 GPHNQ9NQX3 736 aaPredicted RBP10.09□□□□□ -0.79
NPC1-213ENST00000591955 TBC1D12O60347 775 aa10.07□□□□□ -0.8
NPC1-213ENST00000591955 DSG2Q14126 1118 aa10.06□□□□□ -0.8
NPC1-213ENST00000591955 STAC3Q96MF2 364 aa10.06□□□□□ -0.8
NPC1-213ENST00000591955 KCNK17Q96T54 332 aa10.06□□□□□ -0.8
NPC1-213ENST00000591955 MYT1Q01538 1121 aa10.05□□□□□ -0.8
NPC1-213ENST00000591955 VPS9D1Q9Y2B5 631 aa10.05□□□□□ -0.8
NPC1-213ENST00000591955 IFFO2Q5TF58 517 aa10.03□□□□□ -0.8
NPC1-213ENST00000591955 KCNH8Q96L42 1107 aa10.03□□□□□ -0.8
NPC1-213ENST00000591955 RGS20O76081 388 aa10.02□□□□□ -0.81
NPC1-213ENST00000591955 SLC4A5Q9BY07 1137 aa10.01□□□□□ -0.81
NPC1-213ENST00000591955 PTPN5P54829 565 aa10□□□□□ -0.81
NPC1-213ENST00000591955 OXER1Q8TDS5 423 aa9.99□□□□□ -0.81
NPC1-213ENST00000591955 BCL2L12Q9HB09 334 aa9.98□□□□□ -0.81
NPC1-213ENST00000591955 BHMG1C9JSJ3 638 aaPredicted RBP9.97□□□□□ -0.81
NPC1-213ENST00000591955 THSD4Q6ZMP0 1018 aa9.96□□□□□ -0.82
NPC1-213ENST00000591955 ZNF454Q8N9F8 522 aa9.95□□□□□ -0.82
NPC1-213ENST00000591955 HS6ST3Q8IZP7 471 aa9.94□□□□□ -0.82
NPC1-213ENST00000591955 RB1CC1Q8TDY2 1594 aa9.93□□□□□ -0.82
NPC1-213ENST00000591955 A0A0G2JS52 829 aa9.93□□□□□ -0.82
NPC1-213ENST00000591955 IRX2Q9BZI1 471 aaPredicted RBP9.93□□□□□ -0.82
NPC1-213ENST00000591955 FOSBP53539 338 aa9.92□□□□□ -0.82
NPC1-213ENST00000591955 UPF1Q92900 1129 aaKnown RBP eCLIP9.92□□□□□ -0.82
NPC1-213ENST00000591955 ZBED2Q9BTP6 218 aa9.92□□□□□ -0.82
NPC1-213ENST00000591955 PTPREP23469 700 aa9.91□□□□□ -0.82
NPC1-213ENST00000591955 WNT2BQ93097 391 aa9.9□□□□□ -0.82
NPC1-213ENST00000591955 CRISPLD2Q9H0B8 497 aa9.9□□□□□ -0.82
NPC1-213ENST00000591955 GOLGA8CPA6NN73 597 aa9.88□□□□□ -0.83
NPC1-213ENST00000591955 MRPL50Q8N5N7 158 aaKnown RBP9.88□□□□□ -0.83
NPC1-213ENST00000591955 ANO8Q9HCE9 1232 aaPredicted RBP9.88□□□□□ -0.83
NPC1-213ENST00000591955 UNC13AQ9UPW8 1703 aa9.87□□□□□ -0.83
NPC1-213ENST00000591955 JPH4Q96JJ6 628 aa9.87□□□□□ -0.83
NPC1-213ENST00000591955 PPP1R15BQ5SWA1 713 aa9.86□□□□□ -0.83
NPC1-213ENST00000591955 DNAJC5Q9H3Z4 198 aa9.84□□□□□ -0.83
NPC1-213ENST00000591955 ADAM33Q9BZ11 813 aa9.83□□□□□ -0.84
NPC1-213ENST00000591955 NBPF3Q9H094 633 aa9.83□□□□□ -0.84
NPC1-213ENST00000591955 NKX1-1Q15270 411 aaPredicted RBP9.82□□□□□ -0.84
NPC1-213ENST00000591955 ZDHHC16Q969W1 377 aa9.82□□□□□ -0.84
NPC1-213ENST00000591955 NCKAP5LQ9HCH0 1330 aa9.81□□□□□ -0.84
NPC1-213ENST00000591955 EVI5O60447 810 aa9.8□□□□□ -0.84
NPC1-213ENST00000591955 ITGBL1O95965 494 aaPredicted RBP9.79□□□□□ -0.84
NPC1-213ENST00000591955 CHGAP10645 457 aaKnown RBP9.79□□□□□ -0.84
NPC1-213ENST00000591955 RYDENQ9NUL5 291 aaKnown RBP9.78□□□□□ -0.84
NPC1-213ENST00000591955 PDE4AP27815 886 aa9.77□□□□□ -0.85
NPC1-213ENST00000591955 PPP1R3GB7ZBB8 358 aa9.76□□□□□ -0.85
NPC1-213ENST00000591955 RABGEF1Q9UJ41 708 aa9.76□□□□□ -0.85
NPC1-213ENST00000591955 BICRAQ9NZM4 1560 aa9.75□□□□□ -0.85
NPC1-213ENST00000591955 HRCP23327 699 aa9.75□□□□□ -0.85
NPC1-213ENST00000591955 NACADO15069 1562 aa9.75□□□□□ -0.85
NPC1-213ENST00000591955 ANKK1Q8NFD2 765 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms