RNA–Protein interactions for RNA: ENST00000591510.1

PRKCSH-213, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 591 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-213ENST00000591510 GPATCH8Q9UKJ3 1502 aaKnown RBP25.36■■□□□ 1.65
PRKCSH-213ENST00000591510 ARHGAP5Q13017 1502 aa25.33■■□□□ 1.65
PRKCSH-213ENST00000591510 RICTORQ6R327 1708 aa25.32■■□□□ 1.64
PRKCSH-213ENST00000591510 SUPT6HQ7KZ85 1726 aaKnown RBP25.32■■□□□ 1.64
PRKCSH-213ENST00000591510 KANK4Q5T7N3 995 aaPredicted RBP25.32■■□□□ 1.64
PRKCSH-213ENST00000591510 NCOA2Q15596 1464 aa25.32■■□□□ 1.64
PRKCSH-213ENST00000591510 ADGRL1O94910 1474 aa25.29■■□□□ 1.64
PRKCSH-213ENST00000591510 EFCAB2Q5VUJ9 269 aa25.29■■□□□ 1.64
PRKCSH-213ENST00000591510 ABCC1P33527 1531 aa25.27■■□□□ 1.64
PRKCSH-213ENST00000591510 DENND4BO75064 1496 aaPredicted RBP25.27■■□□□ 1.64
PRKCSH-213ENST00000591510 CCNB3Q8WWL7 1395 aa25.26■■□□□ 1.63
PRKCSH-213ENST00000591510 SAMD9LQ8IVG5 1584 aa25.26■■□□□ 1.63
PRKCSH-213ENST00000591510 POGZQ7Z3K3 1410 aa25.25■■□□□ 1.63
PRKCSH-213ENST00000591510 ZMYM4Q5VZL5 1548 aa25.25■■□□□ 1.63
PRKCSH-213ENST00000591510 ARHGEF12Q9NZN5 1544 aa25.25■■□□□ 1.63
PRKCSH-213ENST00000591510 ITSN2Q9NZM3 1697 aa25.25■■□□□ 1.63
PRKCSH-213ENST00000591510 SCAPERQ9BY12 1400 aa25.24■■□□□ 1.63
PRKCSH-213ENST00000591510 RAPGEF3O95398 923 aa25.24■■□□□ 1.63
PRKCSH-213ENST00000591510 KDM5CP41229 1560 aa25.19■■□□□ 1.62
PRKCSH-213ENST00000591510 ARHGEF40Q8TER5 1519 aa25.16■■□□□ 1.62
PRKCSH-213ENST00000591510 KIAA1107Q9UPP5 1409 aa25.15■■□□□ 1.62
PRKCSH-213ENST00000591510 TRAPPC8Q9Y2L5 1435 aa25.15■■□□□ 1.62
PRKCSH-213ENST00000591510 CFDP1Q9UEE9 299 aaPredicted RBP25.15■■□□□ 1.62
PRKCSH-213ENST00000591510 SYCP2Q9BX26 1530 aa25.15■■□□□ 1.62
PRKCSH-213ENST00000591510 ZNF518AQ6AHZ1 1483 aa25.15■■□□□ 1.62
PRKCSH-213ENST00000591510 APLP2Q06481 763 aa25.13■■□□□ 1.61
PRKCSH-213ENST00000591510 MYOM3Q5VTT5 1437 aa25.12■■□□□ 1.61
PRKCSH-213ENST00000591510 PLEKHH2Q8IVE3 1493 aa25.12■■□□□ 1.61
PRKCSH-213ENST00000591510 MAGI2Q86UL8 1455 aa25.11■■□□□ 1.61
PRKCSH-213ENST00000591510 ZNF644Q9H582 1327 aaPredicted RBP25.11■■□□□ 1.61
PRKCSH-213ENST00000591510 MBD5Q9P267 1494 aa25.1■■□□□ 1.61
PRKCSH-213ENST00000591510 YEATS2Q9ULM3 1422 aa25.09■■□□□ 1.61
PRKCSH-213ENST00000591510 CAMSAP2Q08AD1 1489 aa25.09■■□□□ 1.61
PRKCSH-213ENST00000591510 ZFYVE16Q7Z3T8 1539 aa25.08■■□□□ 1.61
PRKCSH-213ENST00000591510 MIA2Q96PC5 1412 aa25.07■■□□□ 1.6
PRKCSH-213ENST00000591510 AFAP1Q8N556 730 aa25.07■■□□□ 1.6
PRKCSH-213ENST00000591510 HECW2Q9P2P5 1572 aa25.06■■□□□ 1.6
PRKCSH-213ENST00000591510 ZNF777Q9ULD5 760 aaPredicted RBP25.06■■□□□ 1.6
PRKCSH-213ENST00000591510 MLH3Q9UHC1 1453 aa25.06■■□□□ 1.6
PRKCSH-213ENST00000591510 SIGLEC1Q9BZZ2 1709 aa25.04■■□□□ 1.6
PRKCSH-213ENST00000591510 KIDINS220Q9ULH0 1771 aa25.03■■□□□ 1.6
PRKCSH-213ENST00000591510 HNRNPMP52272 730 aaKnown RBP eCLIP25.02■■□□□ 1.6
PRKCSH-213ENST00000591510 ARHGEF5Q12774 1597 aa25.01■■□□□ 1.59
PRKCSH-213ENST00000591510 INO80Q9ULG1 1556 aaPredicted RBP25.01■■□□□ 1.59
PRKCSH-213ENST00000591510 DIP2CQ9Y2E4 1556 aa25.01■■□□□ 1.59
PRKCSH-213ENST00000591510 ABCA6Q8N139 1617 aa25.01■■□□□ 1.59
PRKCSH-213ENST00000591510 FGD6Q6ZV73 1430 aa25■■□□□ 1.59
PRKCSH-213ENST00000591510 TCOF1Q13428 1488 aaKnown RBP24.98■■□□□ 1.59
PRKCSH-213ENST00000591510 PTPN23Q9H3S7 1636 aa24.97■■□□□ 1.59
PRKCSH-213ENST00000591510 REREQ9P2R6 1566 aa24.97■■□□□ 1.59
PRKCSH-213ENST00000591510 CCDC141Q6ZP82 1450 aa24.96■■□□□ 1.59
PRKCSH-213ENST00000591510 ATP10AO60312 1499 aa24.96■■□□□ 1.59
PRKCSH-213ENST00000591510 ATP7AQ04656 1500 aa24.95■■□□□ 1.58
PRKCSH-213ENST00000591510 C9orf84Q5VXU9 1444 aa24.93■■□□□ 1.58
PRKCSH-213ENST00000591510 KDM4FA0A1W2PPD8 638 aa24.91■■□□□ 1.58
PRKCSH-213ENST00000591510 SPAG9O60271 1321 aaKnown RBP24.9■■□□□ 1.58
PRKCSH-213ENST00000591510 RTEL1-TNFRSF6BF6WH68 1400 aa24.9■■□□□ 1.58
PRKCSH-213ENST00000591510 BCORL1Q5H9F3 1711 aa24.89■■□□□ 1.58
PRKCSH-213ENST00000591510 MAST1Q9Y2H9 1570 aa24.88■■□□□ 1.57
PRKCSH-213ENST00000591510 ADAMTSL3P82987 1691 aa24.88■■□□□ 1.57
PRKCSH-213ENST00000591510 PLXNC1O60486 1568 aa24.87■■□□□ 1.57
PRKCSH-213ENST00000591510 CROCC2H7BZ55 1655 aa24.87■■□□□ 1.57
PRKCSH-213ENST00000591510 DNMT1P26358 1616 aaKnown RBP24.86■■□□□ 1.57
PRKCSH-213ENST00000591510 RSPH4AQ5TD94 716 aa24.86■■□□□ 1.57
PRKCSH-213ENST00000591510 AGLP35573 1532 aa24.86■■□□□ 1.57
PRKCSH-213ENST00000591510 PPARGC1BQ86YN6 1023 aaKnown RBP24.85■■□□□ 1.57
PRKCSH-213ENST00000591510 ADGBQ8N7X0 1667 aa24.85■■□□□ 1.57
PRKCSH-213ENST00000591510 ABCC5O15440 1437 aa24.84■■□□□ 1.57
PRKCSH-213ENST00000591510 SHANK2Q9UPX8 1470 aa24.83■■□□□ 1.56
PRKCSH-213ENST00000591510 DAPK1P53355 1430 aa24.8■■□□□ 1.56
PRKCSH-213ENST00000591510 A2MP01023 1474 aa24.78■■□□□ 1.56
PRKCSH-213ENST00000591510 MADDQ8WXG6 1647 aa24.77■■□□□ 1.56
PRKCSH-213ENST00000591510 MYT1LQ9UL68 1186 aa24.75■■□□□ 1.55
PRKCSH-213ENST00000591510 RRBP1Q9P2E9 1410 aaKnown RBP24.75■■□□□ 1.55
PRKCSH-213ENST00000591510 ARID4BQ4LE39 1312 aaPredicted RBP24.74■■□□□ 1.55
PRKCSH-213ENST00000591510 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.74■■□□□ 1.55
PRKCSH-213ENST00000591510 DHX29Q7Z478 1369 aaKnown RBP24.72■■□□□ 1.55
PRKCSH-213ENST00000591510 TSPY4P0CV99 314 aa24.71■■□□□ 1.55
PRKCSH-213ENST00000591510 TSPY10P0CW01 314 aa24.71■■□□□ 1.55
PRKCSH-213ENST00000591510 PTPRKQ15262 1439 aa24.7■■□□□ 1.55
PRKCSH-213ENST00000591510 ADGRL2O95490 1459 aa24.7■■□□□ 1.54
PRKCSH-213ENST00000591510 FER1L4A9Z1Z3 1794 aa24.69■■□□□ 1.54
PRKCSH-213ENST00000591510 FAM50AQ14320 339 aaKnown RBP24.67■■□□□ 1.54
PRKCSH-213ENST00000591510 RIMS1Q86UR5 1692 aaKnown RBP24.66■■□□□ 1.54
PRKCSH-213ENST00000591510 PTPRMP28827 1452 aa24.65■■□□□ 1.54
PRKCSH-213ENST00000591510 NCOA1Q15788 1441 aa24.64■■□□□ 1.54
PRKCSH-213ENST00000591510 DUOX2Q9NRD8 1548 aa24.64■■□□□ 1.53
PRKCSH-213ENST00000591510 EIF2AK4Q9P2K8 1649 aaKnown RBP24.63■■□□□ 1.53
PRKCSH-213ENST00000591510 RNF17Q9BXT8 1623 aaKnown RBP24.62■■□□□ 1.53
PRKCSH-213ENST00000591510 MLECQ14165 292 aa24.62■■□□□ 1.53
PRKCSH-213ENST00000591510 KIF15Q9NS87 1388 aa24.62■■□□□ 1.53
PRKCSH-213ENST00000591510 MROH1Q8NDA8 1641 aa24.59■■□□□ 1.53
PRKCSH-213ENST00000591510 ANKRD30AQ9BXX3 1397 aa24.58■■□□□ 1.53
PRKCSH-213ENST00000591510 ERBINQ96RT1 1412 aa24.58■■□□□ 1.53
PRKCSH-213ENST00000591510 CHIC2Q9UKJ5 165 aa24.57■■□□□ 1.52
PRKCSH-213ENST00000591510 ROCK1Q13464 1354 aa24.56■■□□□ 1.52
PRKCSH-213ENST00000591510 MROH2AA6NES4 1674 aa24.55■■□□□ 1.52
PRKCSH-213ENST00000591510 FAM135AQ9P2D6 1515 aa24.55■■□□□ 1.52
PRKCSH-213ENST00000591510 RRP7BPQ9NSQ0 103 aa24.54■■□□□ 1.52
PRKCSH-213ENST00000591510 KIF3BO15066 747 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms