RNA–Protein interactions for RNA: ENST00000591461.1

PKN1-213, Transcript of protein kinase N1, humanhuman

TSL 3

Gene PKN1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-213ENST00000591461 AFAP1Q8N556 730 aa23.17■■□□□ 1.3
PKN1-213ENST00000591461 AEBP2Q6ZN18 517 aaPredicted RBP23.15■■□□□ 1.3
PKN1-213ENST00000591461 GPATCH8Q9UKJ3 1502 aaKnown RBP23.14■■□□□ 1.3
PKN1-213ENST00000591461 CCNB3Q8WWL7 1395 aa23.13■■□□□ 1.29
PKN1-213ENST00000591461 ZNF644Q9H582 1327 aaPredicted RBP23.12■■□□□ 1.29
PKN1-213ENST00000591461 MYO5CQ9NQX4 1742 aa23.12■■□□□ 1.29
PKN1-213ENST00000591461 CFDP1Q9UEE9 299 aaPredicted RBP23.11■■□□□ 1.29
PKN1-213ENST00000591461 ARHGEF12Q9NZN5 1544 aa23.11■■□□□ 1.29
PKN1-213ENST00000591461 HNRNPMP52272 730 aaKnown RBP eCLIP23.1■■□□□ 1.29
PKN1-213ENST00000591461 TIAM1Q13009 1591 aa23.1■■□□□ 1.29
PKN1-213ENST00000591461 POGZQ7Z3K3 1410 aa23.09■■□□□ 1.29
PKN1-213ENST00000591461 YEATS2Q9ULM3 1422 aa23.09■■□□□ 1.29
PKN1-213ENST00000591461 CDC42BPBQ9Y5S2 1711 aa23.08■■□□□ 1.29
PKN1-213ENST00000591461 CFAP74Q9C0B2 1584 aa23.08■■□□□ 1.29
PKN1-213ENST00000591461 EHBP1L1Q8N3D4 1523 aa23.08■■□□□ 1.28
PKN1-213ENST00000591461 TRAPPC8Q9Y2L5 1435 aa23.08■■□□□ 1.28
PKN1-213ENST00000591461 LRRC9Q6ZRR7 1453 aa23.06■■□□□ 1.28
PKN1-213ENST00000591461 MYT1LQ9UL68 1186 aa23.06■■□□□ 1.28
PKN1-213ENST00000591461 PREX2Q70Z35 1606 aa23.05■■□□□ 1.28
PKN1-213ENST00000591461 RICTORQ6R327 1708 aa23.05■■□□□ 1.28
PKN1-213ENST00000591461 NCOA2Q15596 1464 aa23.05■■□□□ 1.28
PKN1-213ENST00000591461 CDC42BPAQ5VT25 1732 aa23.04■■□□□ 1.28
PKN1-213ENST00000591461 ARID4BQ4LE39 1312 aaPredicted RBP23.04■■□□□ 1.28
PKN1-213ENST00000591461 APLP2Q06481 763 aa23.02■■□□□ 1.28
PKN1-213ENST00000591461 SAMD9LQ8IVG5 1584 aa23■■□□□ 1.27
PKN1-213ENST00000591461 ABCC1P33527 1531 aa22.99■■□□□ 1.27
PKN1-213ENST00000591461 MLECQ14165 292 aa22.97■■□□□ 1.27
PKN1-213ENST00000591461 PPARGC1BQ86YN6 1023 aaKnown RBP22.97■■□□□ 1.27
PKN1-213ENST00000591461 ZMYM4Q5VZL5 1548 aa22.97■■□□□ 1.27
PKN1-213ENST00000591461 ZFYVE16Q7Z3T8 1539 aa22.97■■□□□ 1.27
PKN1-213ENST00000591461 ZNF518AQ6AHZ1 1483 aa22.96■■□□□ 1.27
PKN1-213ENST00000591461 MAP3K1Q13233 1512 aa22.96■■□□□ 1.27
PKN1-213ENST00000591461 SYCP2Q9BX26 1530 aa22.96■■□□□ 1.27
PKN1-213ENST00000591461 ARHGEF40Q8TER5 1519 aa22.94■■□□□ 1.26
PKN1-213ENST00000591461 SUPT6HQ7KZ85 1726 aaKnown RBP22.92■■□□□ 1.26
PKN1-213ENST00000591461 MAGI2Q86UL8 1455 aa22.92■■□□□ 1.26
PKN1-213ENST00000591461 SPAG9O60271 1321 aaKnown RBP22.9■■□□□ 1.26
PKN1-213ENST00000591461 KDM5CP41229 1560 aa22.9■■□□□ 1.26
PKN1-213ENST00000591461 SIGLEC1Q9BZZ2 1709 aa22.9■■□□□ 1.26
PKN1-213ENST00000591461 KIAA1107Q9UPP5 1409 aa22.9■■□□□ 1.26
PKN1-213ENST00000591461 ATP10AO60312 1499 aa22.89■■□□□ 1.25
PKN1-213ENST00000591461 ITSN2Q9NZM3 1697 aa22.89■■□□□ 1.25
PKN1-213ENST00000591461 MBD5Q9P267 1494 aa22.88■■□□□ 1.25
PKN1-213ENST00000591461 PLPPR3Q6T4P5 718 aa22.87■■□□□ 1.25
PKN1-213ENST00000591461 MLH3Q9UHC1 1453 aa22.86■■□□□ 1.25
PKN1-213ENST00000591461 CAMSAP2Q08AD1 1489 aa22.85■■□□□ 1.25
PKN1-213ENST00000591461 PLEKHH2Q8IVE3 1493 aa22.85■■□□□ 1.25
PKN1-213ENST00000591461 C9orf84Q5VXU9 1444 aa22.84■■□□□ 1.25
PKN1-213ENST00000591461 HECW2Q9P2P5 1572 aa22.83■■□□□ 1.25
PKN1-213ENST00000591461 MYOM3Q5VTT5 1437 aa22.82■■□□□ 1.24
PKN1-213ENST00000591461 DIP2CQ9Y2E4 1556 aa22.82■■□□□ 1.24
PKN1-213ENST00000591461 ABCA6Q8N139 1617 aa22.81■■□□□ 1.24
PKN1-213ENST00000591461 KIDINS220Q9ULH0 1771 aa22.78■■□□□ 1.24
PKN1-213ENST00000591461 BCORL1Q5H9F3 1711 aa22.77■■□□□ 1.24
PKN1-213ENST00000591461 ADAMTSL3P82987 1691 aa22.76■■□□□ 1.23
PKN1-213ENST00000591461 MADDQ8WXG6 1647 aa22.75■■□□□ 1.23
PKN1-213ENST00000591461 MIA2Q96PC5 1412 aa22.74■■□□□ 1.23
PKN1-213ENST00000591461 PTPRMP28827 1452 aa22.74■■□□□ 1.23
PKN1-213ENST00000591461 ATP7AQ04656 1500 aa22.74■■□□□ 1.23
PKN1-213ENST00000591461 CCDC141Q6ZP82 1450 aa22.73■■□□□ 1.23
PKN1-213ENST00000591461 CEBPAP49715 358 aaPredicted RBP22.73■■□□□ 1.23
PKN1-213ENST00000591461 TSPY4P0CV99 314 aa22.72■■□□□ 1.23
PKN1-213ENST00000591461 TSPY10P0CW01 314 aa22.72■■□□□ 1.23
PKN1-213ENST00000591461 FGD6Q6ZV73 1430 aa22.71■■□□□ 1.23
PKN1-213ENST00000591461 RSPH4AQ5TD94 716 aa22.7■■□□□ 1.22
PKN1-213ENST00000591461 INO80Q9ULG1 1556 aaPredicted RBP22.7■■□□□ 1.22
PKN1-213ENST00000591461 A2MP01023 1474 aa22.69■■□□□ 1.22
PKN1-213ENST00000591461 FAM50AQ14320 339 aaKnown RBP22.69■■□□□ 1.22
PKN1-213ENST00000591461 GGT6Q6P531 493 aa22.68■■□□□ 1.22
PKN1-213ENST00000591461 CHIC2Q9UKJ5 165 aa22.67■■□□□ 1.22
PKN1-213ENST00000591461 RTEL1-TNFRSF6BF6WH68 1400 aa22.66■■□□□ 1.22
PKN1-213ENST00000591461 ABCC5O15440 1437 aa22.66■■□□□ 1.22
PKN1-213ENST00000591461 RIMS1Q86UR5 1692 aaKnown RBP22.65■■□□□ 1.22
PKN1-213ENST00000591461 PTPN23Q9H3S7 1636 aa22.65■■□□□ 1.22
PKN1-213ENST00000591461 ARHGEF5Q12774 1597 aa22.64■■□□□ 1.22
PKN1-213ENST00000591461 REREQ9P2R6 1566 aa22.64■■□□□ 1.22
PKN1-213ENST00000591461 AGLP35573 1532 aa22.64■■□□□ 1.21
PKN1-213ENST00000591461 DHX29Q7Z478 1369 aaKnown RBP22.63■■□□□ 1.21
PKN1-213ENST00000591461 TCOF1Q13428 1488 aaKnown RBP22.62■■□□□ 1.21
PKN1-213ENST00000591461 KIF3BO15066 747 aa22.62■■□□□ 1.21
PKN1-213ENST00000591461 RRP7BPQ9NSQ0 103 aa22.62■■□□□ 1.21
PKN1-213ENST00000591461 DAPK1P53355 1430 aa22.59■■□□□ 1.21
PKN1-213ENST00000591461 ESF1Q9H501 851 aaKnown RBP22.59■■□□□ 1.21
PKN1-213ENST00000591461 PLXNC1O60486 1568 aa22.59■■□□□ 1.21
PKN1-213ENST00000591461 ITGAEP38570 1179 aa22.56■■□□□ 1.2
PKN1-213ENST00000591461 FER1L4A9Z1Z3 1794 aa22.54■■□□□ 1.2
PKN1-213ENST00000591461 HSPA2P54652 639 aa22.53■■□□□ 1.2
PKN1-213ENST00000591461 ADGBQ8N7X0 1667 aa22.52■■□□□ 1.2
PKN1-213ENST00000591461 PTPRKQ15262 1439 aa22.52■■□□□ 1.2
PKN1-213ENST00000591461 KIF15Q9NS87 1388 aa22.51■■□□□ 1.19
PKN1-213ENST00000591461 MAST1Q9Y2H9 1570 aa22.51■■□□□ 1.19
PKN1-213ENST00000591461 ZMYM3Q14202 1370 aa22.5■■□□□ 1.19
PKN1-213ENST00000591461 DNMT1P26358 1616 aaKnown RBP22.48■■□□□ 1.19
PKN1-213ENST00000591461 SHANK2Q9UPX8 1470 aa22.47■■□□□ 1.19
PKN1-213ENST00000591461 FBXO31Q5XUX0 539 aaPredicted RBP22.45■■□□□ 1.18
PKN1-213ENST00000591461 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.45■■□□□ 1.184e-7■□□□□ 9.3
PKN1-213ENST00000591461 WASHC2CQ9Y4E1 1318 aa22.45■■□□□ 1.18
PKN1-213ENST00000591461 LMTK3Q96Q04 1460 aa22.45■■□□□ 1.18
PKN1-213ENST00000591461 NCOA1Q15788 1441 aa22.44■■□□□ 1.18
PKN1-213ENST00000591461 ANKRD30AQ9BXX3 1397 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms