RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 CDC42BPAQ5VT25 1732 aa18.26■□□□□ 0.51
VMP1-211ENST00000591315 KANK4Q5T7N3 995 aaPredicted RBP18.26■□□□□ 0.51
VMP1-211ENST00000591315 CFAP74Q9C0B2 1584 aa18.25■□□□□ 0.51
VMP1-211ENST00000591315 SCAPERQ9BY12 1400 aa18.25■□□□□ 0.51
VMP1-211ENST00000591315 DENND4BO75064 1496 aaPredicted RBP18.25■□□□□ 0.51
VMP1-211ENST00000591315 ADGRL1O94910 1474 aa18.25■□□□□ 0.51
VMP1-211ENST00000591315 GPATCH8Q9UKJ3 1502 aaKnown RBP18.24■□□□□ 0.51
VMP1-211ENST00000591315 PREX2Q70Z35 1606 aa18.24■□□□□ 0.51
VMP1-211ENST00000591315 RICTORQ6R327 1708 aa18.24■□□□□ 0.51
VMP1-211ENST00000591315 EHBP1L1Q8N3D4 1523 aa18.23■□□□□ 0.51
VMP1-211ENST00000591315 ZNF777Q9ULD5 760 aaPredicted RBP18.21■□□□□ 0.51
VMP1-211ENST00000591315 CCNB3Q8WWL7 1395 aa18.2■□□□□ 0.5
VMP1-211ENST00000591315 ARHGEF12Q9NZN5 1544 aa18.2■□□□□ 0.5
VMP1-211ENST00000591315 KDM4FA0A1W2PPD8 638 aa18.2■□□□□ 0.5
VMP1-211ENST00000591315 LRRC9Q6ZRR7 1453 aa18.2■□□□□ 0.5
VMP1-211ENST00000591315 POGZQ7Z3K3 1410 aa18.19■□□□□ 0.5
VMP1-211ENST00000591315 AFAP1Q8N556 730 aa18.19■□□□□ 0.5
VMP1-211ENST00000591315 NCOA2Q15596 1464 aa18.19■□□□□ 0.5
VMP1-211ENST00000591315 ZNF644Q9H582 1327 aaPredicted RBP18.17■□□□□ 0.5
VMP1-211ENST00000591315 SAMD9LQ8IVG5 1584 aa18.17■□□□□ 0.5
VMP1-211ENST00000591315 YEATS2Q9ULM3 1422 aa18.16■□□□□ 0.5
VMP1-211ENST00000591315 TRAPPC8Q9Y2L5 1435 aa18.16■□□□□ 0.5
VMP1-211ENST00000591315 CFDP1Q9UEE9 299 aaPredicted RBP18.16■□□□□ 0.5
VMP1-211ENST00000591315 ABCC1P33527 1531 aa18.16■□□□□ 0.5
VMP1-211ENST00000591315 MAP3K1Q13233 1512 aa18.16■□□□□ 0.5
VMP1-211ENST00000591315 SUPT6HQ7KZ85 1726 aaKnown RBP18.15■□□□□ 0.5
VMP1-211ENST00000591315 HNRNPMP52272 730 aaKnown RBP eCLIP18.14■□□□□ 0.492e-7■■■■□ 25.4
VMP1-211ENST00000591315 ZMYM4Q5VZL5 1548 aa18.13■□□□□ 0.49
VMP1-211ENST00000591315 ITSN2Q9NZM3 1697 aa18.13■□□□□ 0.49
VMP1-211ENST00000591315 APLP2Q06481 763 aa18.11■□□□□ 0.49
VMP1-211ENST00000591315 ARHGEF40Q8TER5 1519 aa18.11■□□□□ 0.49
VMP1-211ENST00000591315 SYCP2Q9BX26 1530 aa18.11■□□□□ 0.49
VMP1-211ENST00000591315 ZFYVE16Q7Z3T8 1539 aa18.1■□□□□ 0.49
VMP1-211ENST00000591315 SIGLEC1Q9BZZ2 1709 aa18.09■□□□□ 0.49
VMP1-211ENST00000591315 ZNF518AQ6AHZ1 1483 aa18.09■□□□□ 0.49
VMP1-211ENST00000591315 KDM5CP41229 1560 aa18.08■□□□□ 0.49
VMP1-211ENST00000591315 MYT1LQ9UL68 1186 aa18.06■□□□□ 0.48
VMP1-211ENST00000591315 MAGI2Q86UL8 1455 aa18.06■□□□□ 0.48
VMP1-211ENST00000591315 ARID4BQ4LE39 1312 aaPredicted RBP18.05■□□□□ 0.48
VMP1-211ENST00000591315 KIAA1107Q9UPP5 1409 aa18.05■□□□□ 0.48
VMP1-211ENST00000591315 PPARGC1BQ86YN6 1023 aaKnown RBP18.04■□□□□ 0.48
VMP1-211ENST00000591315 HECW2Q9P2P5 1572 aa18.04■□□□□ 0.48
VMP1-211ENST00000591315 MBD5Q9P267 1494 aa18.03■□□□□ 0.48
VMP1-211ENST00000591315 CAMSAP2Q08AD1 1489 aa18.02■□□□□ 0.48
VMP1-211ENST00000591315 PLEKHH2Q8IVE3 1493 aa18.02■□□□□ 0.48
VMP1-211ENST00000591315 MLH3Q9UHC1 1453 aa18.02■□□□□ 0.48
VMP1-211ENST00000591315 ABCA6Q8N139 1617 aa18.02■□□□□ 0.48
VMP1-211ENST00000591315 KIDINS220Q9ULH0 1771 aa18.02■□□□□ 0.48
VMP1-211ENST00000591315 ATP10AO60312 1499 aa18.01■□□□□ 0.47
VMP1-211ENST00000591315 DIP2CQ9Y2E4 1556 aa18.01■□□□□ 0.47
VMP1-211ENST00000591315 MYOM3Q5VTT5 1437 aa18.01■□□□□ 0.47
VMP1-211ENST00000591315 SPAG9O60271 1321 aaKnown RBP18■□□□□ 0.47
VMP1-211ENST00000591315 MLECQ14165 292 aa18■□□□□ 0.47
VMP1-211ENST00000591315 C9orf84Q5VXU9 1444 aa17.98■□□□□ 0.47
VMP1-211ENST00000591315 BCORL1Q5H9F3 1711 aa17.98■□□□□ 0.47
VMP1-211ENST00000591315 ADAMTSL3P82987 1691 aa17.97■□□□□ 0.47
VMP1-211ENST00000591315 ATP7AQ04656 1500 aa17.95■□□□□ 0.46
VMP1-211ENST00000591315 INO80Q9ULG1 1556 aaPredicted RBP17.95■□□□□ 0.46
VMP1-211ENST00000591315 MADDQ8WXG6 1647 aa17.94■□□□□ 0.46
VMP1-211ENST00000591315 MIA2Q96PC5 1412 aa17.94■□□□□ 0.46
VMP1-211ENST00000591315 CCDC141Q6ZP82 1450 aa17.93■□□□□ 0.46
VMP1-211ENST00000591315 PTPN23Q9H3S7 1636 aa17.91■□□□□ 0.46
VMP1-211ENST00000591315 FGD6Q6ZV73 1430 aa17.91■□□□□ 0.46
VMP1-211ENST00000591315 ARHGEF5Q12774 1597 aa17.91■□□□□ 0.46
VMP1-211ENST00000591315 REREQ9P2R6 1566 aa17.89■□□□□ 0.45
VMP1-211ENST00000591315 PLPPR3Q6T4P5 718 aa17.89■□□□□ 0.45
VMP1-211ENST00000591315 RIMS1Q86UR5 1692 aaKnown RBP17.89■□□□□ 0.45
VMP1-211ENST00000591315 PTPRMP28827 1452 aa17.88■□□□□ 0.45
VMP1-211ENST00000591315 A2MP01023 1474 aa17.87■□□□□ 0.45
VMP1-211ENST00000591315 RSPH4AQ5TD94 716 aa17.86■□□□□ 0.45
VMP1-211ENST00000591315 RTEL1-TNFRSF6BF6WH68 1400 aa17.86■□□□□ 0.45
VMP1-211ENST00000591315 ABCC5O15440 1437 aa17.86■□□□□ 0.45
VMP1-211ENST00000591315 TCOF1Q13428 1488 aaKnown RBP17.86■□□□□ 0.45
VMP1-211ENST00000591315 AGLP35573 1532 aa17.86■□□□□ 0.45
VMP1-211ENST00000591315 TSPY4P0CV99 314 aa17.85■□□□□ 0.45
VMP1-211ENST00000591315 TSPY10P0CW01 314 aa17.85■□□□□ 0.45
VMP1-211ENST00000591315 ADGBQ8N7X0 1667 aa17.85■□□□□ 0.45
VMP1-211ENST00000591315 FER1L4A9Z1Z3 1794 aa17.84■□□□□ 0.45
VMP1-211ENST00000591315 PLXNC1O60486 1568 aa17.84■□□□□ 0.45
VMP1-211ENST00000591315 FAM50AQ14320 339 aaKnown RBP17.84■□□□□ 0.45
VMP1-211ENST00000591315 CEBPAP49715 358 aaPredicted RBP17.82■□□□□ 0.44
VMP1-211ENST00000591315 CHIC2Q9UKJ5 165 aa17.81■□□□□ 0.44
VMP1-211ENST00000591315 MAST1Q9Y2H9 1570 aa17.81■□□□□ 0.44
VMP1-211ENST00000591315 DAPK1P53355 1430 aa17.81■□□□□ 0.44
VMP1-211ENST00000591315 DHX29Q7Z478 1369 aaKnown RBP17.8■□□□□ 0.44
VMP1-211ENST00000591315 DNMT1P26358 1616 aaKnown RBP17.8■□□□□ 0.44
VMP1-211ENST00000591315 GGT6Q6P531 493 aa17.79■□□□□ 0.44
VMP1-211ENST00000591315 CROCC2H7BZ55 1655 aa17.79■□□□□ 0.44
VMP1-211ENST00000591315 KIF3BO15066 747 aa17.77■□□□□ 0.44
VMP1-211ENST00000591315 RRP7BPQ9NSQ0 103 aa17.77■□□□□ 0.44
VMP1-211ENST00000591315 PTPRKQ15262 1439 aa17.75■□□□□ 0.43
VMP1-211ENST00000591315 SHANK2Q9UPX8 1470 aa17.75■□□□□ 0.43
VMP1-211ENST00000591315 KIF15Q9NS87 1388 aa17.73■□□□□ 0.43
VMP1-211ENST00000591315 ITGAEP38570 1179 aa17.72■□□□□ 0.43
VMP1-211ENST00000591315 ESF1Q9H501 851 aaKnown RBP17.72■□□□□ 0.43
VMP1-211ENST00000591315 C3P01024 1663 aa17.71■□□□□ 0.43
VMP1-211ENST00000591315 CLTCQ00610 1675 aaKnown RBP17.71■□□□□ 0.43
VMP1-211ENST00000591315 NCOA1Q15788 1441 aa17.69■□□□□ 0.42
VMP1-211ENST00000591315 DUOX2Q9NRD8 1548 aa17.68■□□□□ 0.42
VMP1-211ENST00000591315 ZMYM3Q14202 1370 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms