RNA–Protein interactions for RNA: ENST00000591028.1

NFIX-213, Transcript of nuclear factor I X, humanhuman

TSL 3

Gene NFIX, Length 582 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-213ENST00000591028 ATP1B4Q9UN42 357 aaPredicted RBP25.35■■□□□ 1.65
NFIX-213ENST00000591028 ZFYVE16Q7Z3T8 1539 aa25.34■■□□□ 1.65
NFIX-213ENST00000591028 YEATS2Q9ULM3 1422 aa25.32■■□□□ 1.64
NFIX-213ENST00000591028 CASKIN1Q8WXD9 1431 aa25.29■■□□□ 1.64
NFIX-213ENST00000591028 PLCH2O75038 1416 aa25.29■■□□□ 1.64
NFIX-213ENST00000591028 POGZQ7Z3K3 1410 aa25.29■■□□□ 1.64
NFIX-213ENST00000591028 FYCO1Q9BQS8 1478 aa25.28■■□□□ 1.64
NFIX-213ENST00000591028 SCAPERQ9BY12 1400 aa25.26■■□□□ 1.63
NFIX-213ENST00000591028 PCF11O94913 1555 aaKnown RBP25.25■■□□□ 1.63
NFIX-213ENST00000591028 CCDC18Q5T9S5 1454 aa25.23■■□□□ 1.63
NFIX-213ENST00000591028 FER1L4A9Z1Z3 1794 aa25.23■■□□□ 1.63
NFIX-213ENST00000591028 MAGI2Q86UL8 1455 aa25.22■■□□□ 1.63
NFIX-213ENST00000591028 TROQ12816 1431 aaPredicted RBP25.22■■□□□ 1.63
NFIX-213ENST00000591028 VPS8Q8N3P4 1428 aa25.22■■□□□ 1.63
NFIX-213ENST00000591028 LMTK3Q96Q04 1460 aa25.21■■□□□ 1.63
NFIX-213ENST00000591028 CDK11AQ9UQ88 783 aaPredicted RBP25.21■■□□□ 1.63
NFIX-213ENST00000591028 ARHGAP5Q13017 1502 aa25.2■■□□□ 1.62
NFIX-213ENST00000591028 CDC42BPBQ9Y5S2 1711 aa25.17■■□□□ 1.62
NFIX-213ENST00000591028 PLPPR3Q6T4P5 718 aa25.16■■□□□ 1.62
NFIX-213ENST00000591028 MLECQ14165 292 aa25.14■■□□□ 1.62
NFIX-213ENST00000591028 EFCAB2Q5VUJ9 269 aa25.14■■□□□ 1.62
NFIX-213ENST00000591028 PREX2Q70Z35 1606 aa25.14■■□□□ 1.61
NFIX-213ENST00000591028 KDM5CP41229 1560 aa25.13■■□□□ 1.61
NFIX-213ENST00000591028 C9orf84Q5VXU9 1444 aa25.12■■□□□ 1.61
NFIX-213ENST00000591028 ATP10AO60312 1499 aa25.11■■□□□ 1.61
NFIX-213ENST00000591028 ZNF518AQ6AHZ1 1483 aa25.11■■□□□ 1.61
NFIX-213ENST00000591028 ARHGEF12Q9NZN5 1544 aa25.09■■□□□ 1.61
NFIX-213ENST00000591028 DIP2CQ9Y2E4 1556 aa25.08■■□□□ 1.61
NFIX-213ENST00000591028 CDC42BPAQ5VT25 1732 aa25.07■■□□□ 1.6
NFIX-213ENST00000591028 ABCA6Q8N139 1617 aa25.07■■□□□ 1.6
NFIX-213ENST00000591028 ITSN2Q9NZM3 1697 aa25.07■■□□□ 1.6
NFIX-213ENST00000591028 ABCC1P33527 1531 aa25.07■■□□□ 1.6
NFIX-213ENST00000591028 HSPA2P54652 639 aa25.04■■□□□ 1.6
NFIX-213ENST00000591028 AFAP1Q8N556 730 aa25.04■■□□□ 1.6
NFIX-213ENST00000591028 APLP2Q06481 763 aa25.03■■□□□ 1.6
NFIX-213ENST00000591028 MAP3K1Q13233 1512 aa25.02■■□□□ 1.6
NFIX-213ENST00000591028 PREX1Q8TCU6 1659 aa24.99■■□□□ 1.59
NFIX-213ENST00000591028 TRAPPC8Q9Y2L5 1435 aa24.99■■□□□ 1.59
NFIX-213ENST00000591028 REREQ9P2R6 1566 aa24.98■■□□□ 1.59
NFIX-213ENST00000591028 MYT1LQ9UL68 1186 aa24.97■■□□□ 1.59
NFIX-213ENST00000591028 MLH3Q9UHC1 1453 aa24.96■■□□□ 1.59
NFIX-213ENST00000591028 KIDINS220Q9ULH0 1771 aa24.95■■□□□ 1.59
NFIX-213ENST00000591028 MTUS2Q5JR59 1369 aa24.95■■□□□ 1.59
NFIX-213ENST00000591028 SAMD9LQ8IVG5 1584 aa24.94■■□□□ 1.58
NFIX-213ENST00000591028 TIAM1Q13009 1591 aa24.93■■□□□ 1.58
NFIX-213ENST00000591028 FBXO41Q8TF61 875 aa24.93■■□□□ 1.58
NFIX-213ENST00000591028 EHBP1L1Q8N3D4 1523 aa24.92■■□□□ 1.58
NFIX-213ENST00000591028 CEBPAP49715 358 aaPredicted RBP24.92■■□□□ 1.58
NFIX-213ENST00000591028 SYCP2Q9BX26 1530 aa24.91■■□□□ 1.58
NFIX-213ENST00000591028 C3P01024 1663 aa24.91■■□□□ 1.58
NFIX-213ENST00000591028 AGLP35573 1532 aa24.87■■□□□ 1.57
NFIX-213ENST00000591028 GPATCH8Q9UKJ3 1502 aaKnown RBP24.86■■□□□ 1.57
NFIX-213ENST00000591028 ZNF777Q9ULD5 760 aaPredicted RBP24.85■■□□□ 1.57
NFIX-213ENST00000591028 LRRC9Q6ZRR7 1453 aa24.83■■□□□ 1.57
NFIX-213ENST00000591028 STRCQ7RTU9 1775 aa24.82■■□□□ 1.56
NFIX-213ENST00000591028 SUPT6HQ7KZ85 1726 aaKnown RBP24.81■■□□□ 1.56
NFIX-213ENST00000591028 UHRF1BP1Q6BDS2 1440 aa24.8■■□□□ 1.56
NFIX-213ENST00000591028 INO80Q9ULG1 1556 aaPredicted RBP24.8■■□□□ 1.56
NFIX-213ENST00000591028 SETD1BQ9UPS6 1966 aaKnown RBP24.79■■□□□ 1.56
NFIX-213ENST00000591028 ATP7AQ04656 1500 aa24.78■■□□□ 1.56
NFIX-213ENST00000591028 HNRNPMP52272 730 aaKnown RBP eCLIP24.76■■□□□ 1.55
NFIX-213ENST00000591028 CCNB3Q8WWL7 1395 aa24.76■■□□□ 1.55
NFIX-213ENST00000591028 SPAG9O60271 1321 aaKnown RBP24.74■■□□□ 1.55
NFIX-213ENST00000591028 PLXNC1O60486 1568 aa24.74■■□□□ 1.55
NFIX-213ENST00000591028 MROH2AA6NES4 1674 aa24.73■■□□□ 1.55
NFIX-213ENST00000591028 PLEKHH2Q8IVE3 1493 aa24.72■■□□□ 1.55
NFIX-213ENST00000591028 ESF1Q9H501 851 aaKnown RBP24.72■■□□□ 1.55
NFIX-213ENST00000591028 CFDP1Q9UEE9 299 aaPredicted RBP24.72■■□□□ 1.55
NFIX-213ENST00000591028 KIAA1107Q9UPP5 1409 aa24.71■■□□□ 1.55
NFIX-213ENST00000591028 CLTCQ00610 1675 aaKnown RBP24.71■■□□□ 1.55
NFIX-213ENST00000591028 NCOA2Q15596 1464 aa24.7■■□□□ 1.54
NFIX-213ENST00000591028 CNTLNQ9NXG0 1405 aa24.69■■□□□ 1.54
NFIX-213ENST00000591028 CERKQ8TCT0 537 aa24.68■■□□□ 1.54
NFIX-213ENST00000591028 ADGBQ8N7X0 1667 aa24.66■■□□□ 1.54
NFIX-213ENST00000591028 A2MP01023 1474 aa24.66■■□□□ 1.54
NFIX-213ENST00000591028 KANK4Q5T7N3 995 aaPredicted RBP24.66■■□□□ 1.54
NFIX-213ENST00000591028 ZNF644Q9H582 1327 aaPredicted RBP24.65■■□□□ 1.54
NFIX-213ENST00000591028 MYO3AQ8NEV4 1616 aa24.61■■□□□ 1.53
NFIX-213ENST00000591028 MBD5Q9P267 1494 aa24.6■■□□□ 1.53
NFIX-213ENST00000591028 NPATQ14207 1427 aa24.59■■□□□ 1.53
NFIX-213ENST00000591028 MYOM3Q5VTT5 1437 aa24.59■■□□□ 1.53
NFIX-213ENST00000591028 MIA2Q96PC5 1412 aa24.59■■□□□ 1.53
NFIX-213ENST00000591028 ZMYM3Q14202 1370 aa24.58■■□□□ 1.53
NFIX-213ENST00000591028 ZNF142P52746 1687 aaPredicted RBP24.58■■□□□ 1.53
NFIX-213ENST00000591028 NCOA1Q15788 1441 aa24.58■■□□□ 1.53
NFIX-213ENST00000591028 CAMSAP1Q5T5Y3 1602 aa24.57■■□□□ 1.52
NFIX-213ENST00000591028 DMRT2Q9Y5R5 561 aa24.57■■□□□ 1.52
NFIX-213ENST00000591028 PTPRTO14522 1441 aa24.56■■□□□ 1.52
NFIX-213ENST00000591028 CAMSAP2Q08AD1 1489 aa24.55■■□□□ 1.52
NFIX-213ENST00000591028 GGT6Q6P531 493 aa24.53■■□□□ 1.52
NFIX-213ENST00000591028 PTPRKQ15262 1439 aa24.52■■□□□ 1.52
NFIX-213ENST00000591028 CCDC141Q6ZP82 1450 aa24.51■■□□□ 1.51
NFIX-213ENST00000591028 CEP170BQ9Y4F5 1589 aaPredicted RBP24.51■■□□□ 1.51
NFIX-213ENST00000591028 RTEL1-TNFRSF6BF6WH68 1400 aa24.5■■□□□ 1.51
NFIX-213ENST00000591028 LTBP4Q8N2S1 1624 aa24.5■■□□□ 1.51
NFIX-213ENST00000591028 RSPH4AQ5TD94 716 aa24.48■■□□□ 1.51
NFIX-213ENST00000591028 FGD6Q6ZV73 1430 aa24.46■■□□□ 1.51
NFIX-213ENST00000591028 DHX29Q7Z478 1369 aaKnown RBP24.43■■□□□ 1.5
NFIX-213ENST00000591028 ARHGEF5Q12774 1597 aa24.43■■□□□ 1.5
NFIX-213ENST00000591028 NCKAP5LQ9HCH0 1330 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms